RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 TMEM133Q9H2Q1 129 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 LHX9Q9NQ69 397 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 COA4Q9NYJ1 87 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 OR5V1Q9UGF6 321 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 RNF11Q9Y3C5 154 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 MACF1Q9UPN3 7388 aaKnown RBP2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 FAT1Q14517 4588 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 PLXNA2O75051 1894 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 IGKV1OR2-108A0A075B7D4 117 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 TRBV6-6A0A0A6YYG2 114 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 TRAV5A0A0B4J249 113 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 IGKV1-9A0A0C4DH69 117 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 A0A1B0GW54 56 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 ODAMA1E959 279 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 ARRDC5A6NEK1 342 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 FABP5P3A8MUU1 101 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 A8MUU9 505 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 H3BMM0 161 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 M0R2Z0 102 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 PHOX2AO14813 284 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 LEPROTO15243 131 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 LHBP01229 141 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 IGLV1-47P01700 117 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 MT-ND4LP03901 98 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 KRTAP1-4P0C5Y4 121 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 P0DMU3 169 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 FAM231AP0DMU4 169 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 FAM231CP0DMU5 169 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 ASIPP42127 132 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 LINC01554Q52M75 96 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 KPRPQ5T749 579 aaPredicted RBP2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 SPANXA2-OT1Q8N9U9 137 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 UBE2WQ96B02 151 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 C14orf144Q96I85 54 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 LXNQ9BS40 222 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 PRADC1Q9BSG0 188 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 LINC00470Q9BZP3 86 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 C16orf95Q9H693 158 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 TNFRSF19Q9NS68 423 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 OR5AC2Q9NZP5 309 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 CKLFQ9UBR5 152 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 NAT8BQ9UHF3 227 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 SNX12Q9UMY4 172 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 U3KQK5 164 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 MALRD1Q5VYJ5 2156 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 ALPK2Q86TB3 2170 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 ZNF407Q9C0G0 2248 aa2.33□□□□□ -2.04
EXOSC3-208ENST00000496910 EML6Q6ZMW3 1958 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 ALMS1Q8TCU4 4167 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 IGKV6D-41A0A0C4DH26 115 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 C19orf71A6NCJ1 209 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 GGT3PA6NGU5 568 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 PANO1I0J062 215 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 TMEM256-PLSCR3K7ERE1 68 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 SLC25A20O43772 301 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 SH2D1AO60880 128 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 LYZL6O75951 148 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 UCHL1P09936 223 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 HLA-DMBP28068 263 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 AKR1C2P52895 323 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 MAXP61244 160 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 NCS1P62166 190 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 RPS25P62851 125 aaKnown RBP2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 KISS1Q15726 138 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 MSMO1Q15800 293 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 DEFB116Q30KQ4 102 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 VMA21Q3ZAQ7 101 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 TMEM244Q5VVB8 128 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 HAGHLQ6PII5 290 aaPredicted RBP2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 CROCCP2Q86T23 111 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 OR2T10Q8NGZ9 312 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 PPTC7Q8NI37 304 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 HIST1H2BAQ96A08 127 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 RNF5Q99942 180 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 TNFSF18Q9UNG2 199 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 ICOSQ9Y6W8 199 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 MYH1P12882 1939 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 SCN1AP35498 2009 aa2.32□□□□□ -2.04
EXOSC3-208ENST00000496910 HEATR5AQ86XA9 2040 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 IGLV3-10A0A075B6K4 115 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 TRBV24-1A0A075B6N3 115 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 MDFIC2A0A1B0GVS7 189 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 PINLYPA6NC86 204 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 FAM25AB3EWG3 89 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 FAM25CB3EWG5 89 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 FAM25GB3EWG6 89 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 K7ERU9 68 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 DPM2O94777 84 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 NDUFB2O95178 105 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 IGKV1-16P04430 117 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 CXCL1P09341 107 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 LINC00694P0DN24 101 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 SLC25A16P16260 332 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 RNASE4P34096 147 aaKnown RBP2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 RPL27AP46776 148 aaKnown RBP2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 RAB5CP51148 216 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 RBM11P57052 281 aaKnown RBP2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 SELENOWP63302 87 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms