RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 OTOSQ8NHW6 89 aa1.66□□□□□ -2.14
CLK1-214ENST00000496205 FKBP11Q9NYL4 201 aa1.66□□□□□ -2.14
CLK1-214ENST00000496205 CHCHD2Q9Y6H1 151 aaPredicted RBP1.66□□□□□ -2.14
CLK1-214ENST00000496205 SYNJ1O43426 1573 aa1.66□□□□□ -2.14
CLK1-214ENST00000496205 POLEQ07864 2286 aa1.66□□□□□ -2.14
CLK1-214ENST00000496205 WDR97A6NE52 1622 aa1.66□□□□□ -2.14
CLK1-214ENST00000496205 TRAV12-2A0A075B6T6 113 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 IGHV1-24A0A0C4DH33 117 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 C9orf170A2RU37 121 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 B4DSR2 109 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 ZNF736B4DX44 427 aaPredicted RBP1.65□□□□□ -2.15
CLK1-214ENST00000496205 SMIM6P0DI80 62 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 DEFB113Q30KQ7 82 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 C1orf137Q5JT78 98 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 KRTAP26-1Q6PEX3 210 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 CASC2Q6XLA1 102 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 PP6455Q8WZ26 134 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 TXNDC17Q9BRA2 123 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 TTTY12Q9BZ98 90 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 LSM2Q9Y333 95 aaKnown RBP1.65□□□□□ -2.15
CLK1-214ENST00000496205 PHLPP1O60346 1717 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 TANC2Q9HCD6 1990 aa1.65□□□□□ -2.15
CLK1-214ENST00000496205 LAMB2P55268 1798 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 USP54Q70EL1 1684 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 ADGRB1O14514 1584 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 MYH7P12883 1935 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 COL5A1P20908 1838 aaPredicted RBP1.64□□□□□ -2.15
CLK1-214ENST00000496205 FOCADQ5VW36 1801 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 C3orf85A0A1B0GTC6 90 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 A6NN06 94 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 C5orf67F2Z3F1 127 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 AKAIN1P0CW23 69 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 HIST1H1DP16402 221 aaKnown RBP1.64□□□□□ -2.15
CLK1-214ENST00000496205 GNG4P50150 75 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 CNBPP62633 177 aaKnown RBP1.64□□□□□ -2.15
CLK1-214ENST00000496205 DPH3Q96FX2 82 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 PPP3R2Q96LZ3 170 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 TAS2R8Q9NYW2 309 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 ERBINQ96RT1 1412 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 MYH1P12882 1939 aa1.64□□□□□ -2.15
CLK1-214ENST00000496205 COL11A1P12107 1806 aaPredicted RBP1.63□□□□□ -2.15
CLK1-214ENST00000496205 LTBP2Q14767 1821 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 PXDNLA1KZ92 1463 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 MBD5Q9P267 1494 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 CCNB3Q8WWL7 1395 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 TOP2AP11388 1531 aaKnown RBP1.63□□□□□ -2.15
CLK1-214ENST00000496205 C20orf202A1L168 122 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 J3QLW9 94 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 EDF1O60869 148 aaKnown RBP1.63□□□□□ -2.15
CLK1-214ENST00000496205 MEIG1Q5JSS6 88 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 FOXI2Q6ZQN5 318 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 Q6ZUT4 128 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 CLECL1Q8IZS7 167 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 SPACA4Q8TDM5 124 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 ZCCHC13Q8WW36 166 aaKnown RBP1.63□□□□□ -2.15
CLK1-214ENST00000496205 NAA60Q9H7X0 242 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 SCN3BQ9NY72 215 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 ORMDL1Q9P0S3 153 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 NOP16Q9Y3C1 178 aaKnown RBP1.63□□□□□ -2.15
CLK1-214ENST00000496205 LAMC3Q9Y6N6 1575 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 ZFC3H1O60293 1989 aaKnown RBP1.63□□□□□ -2.15
CLK1-214ENST00000496205 COL24A1Q17RW2 1714 aa1.63□□□□□ -2.15
CLK1-214ENST00000496205 CC2D2AQ9P2K1 1620 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 COL4A5P29400 1685 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 TNFP01375 233 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 IGHV3-33P01772 117 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 COX7CP15954 63 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 MIR22HGQ0VDD5 57 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 GKN2Q86XP6 184 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 FAM19A2Q8N3H0 131 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 VPS8Q8N3P4 1428 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 CNTLNQ9NXG0 1405 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 MYO9BQ13459 2157 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 MYH6P13533 1939 aa1.62□□□□□ -2.15
CLK1-214ENST00000496205 WIZO95785 1651 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 MROH2BQ7Z745 1585 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 UQCRHLA0A096LP55 91 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 S100A8P05109 93 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 UQCRHP07919 91 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 RBP2P50120 134 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 FAM74A1Q5RGS3 127 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 C10orf55Q5SWW7 151 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.61□□□□□ -2.15
CLK1-214ENST00000496205 FP248Q71RG6 208 aaPredicted RBP1.61□□□□□ -2.15
CLK1-214ENST00000496205 VSTM2AQ8TAG5 236 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 PATE1Q8WXA2 126 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 C14orf144Q96I85 54 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 BOKQ9UMX3 212 aaPredicted RBP1.61□□□□□ -2.15
CLK1-214ENST00000496205 IER3IP1Q9Y5U9 82 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 MYH13Q9UKX3 1938 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 BIVM-ERCC5R4GMW8 1640 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 A2ML1A8K2U0 1454 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 CFTRP13569 1480 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 MYOM2P54296 1465 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 SCN3AQ9NY46 2000 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 ADGRB3O60242 1522 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 MAPKBP1O60336 1514 aa1.61□□□□□ -2.15
CLK1-214ENST00000496205 NCKAP5O14513 1909 aa1.6□□□□□ -2.15
CLK1-214ENST00000496205 MYH9P35579 1960 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms