RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 GAGE12FP0CL80 117 aa10.88□□□□□ -0.67
COL4A2-209ENST00000494852 GAGE12GP0CL81 117 aa10.88□□□□□ -0.67
COL4A2-209ENST00000494852 GAGE12IP0CL82 117 aa10.88□□□□□ -0.67
COL4A2-209ENST00000494852 ERVFC1-1P60608 527 aa10.88□□□□□ -0.67
COL4A2-209ENST00000494852 C9orf47Q6ZRZ4 202 aa10.88□□□□□ -0.67
COL4A2-209ENST00000494852 CCDC28AQ8IWP9 274 aa10.88□□□□□ -0.67
COL4A2-209ENST00000494852 IGKV2-40A0A087WW87 121 aaPredicted RBP10.87□□□□□ -0.67
COL4A2-209ENST00000494852 EIF3GO75821 320 aaKnown RBP eCLIP10.87□□□□□ -0.67
COL4A2-209ENST00000494852 IGKV2D-40P01614 121 aaPredicted RBP10.87□□□□□ -0.67
COL4A2-209ENST00000494852 RANP62826 216 aaKnown RBP10.87□□□□□ -0.67
COL4A2-209ENST00000494852 UBE2L3P68036 154 aaKnown RBP10.87□□□□□ -0.67
COL4A2-209ENST00000494852 A0A096LPF7 62 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 TRAV12-3A0A0B4J271 114 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 A0A1W2PPV4 95 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 SNURFLB1AK76 121 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 KLLNB2CW77 178 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 SIVA1O15304 175 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 SLC25A5P05141 298 aaKnown RBP10.86□□□□□ -0.67
COL4A2-209ENST00000494852 FUSP35637 526 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL4A2-209ENST00000494852 RAB2AP61019 212 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 HSD17B11Q8NBQ5 300 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 INO80EQ8NBZ0 244 aaPredicted RBP10.86□□□□□ -0.67
COL4A2-209ENST00000494852 OR10G4Q8NGN3 311 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 OR10G9Q8NGN4 311 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 OR10G7Q8NGN6 311 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 OR2T35Q8NGX2 323 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 OR2G3Q8NGZ4 309 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 VGLL1Q99990 258 aa10.86□□□□□ -0.67
COL4A2-209ENST00000494852 PSMG3Q9BT73 122 aaPredicted RBP10.86□□□□□ -0.67
COL4A2-209ENST00000494852 C7orf71A4D174 169 aa10.85□□□□□ -0.67
COL4A2-209ENST00000494852 RNF222A6NCQ9 220 aa10.85□□□□□ -0.67
COL4A2-209ENST00000494852 NMBP08949 121 aa10.85□□□□□ -0.67
COL4A2-209ENST00000494852 CRISP2P16562 243 aa10.85□□□□□ -0.67
COL4A2-209ENST00000494852 CSN1S1P47710 185 aa10.85□□□□□ -0.67
COL4A2-209ENST00000494852 DAZ2Q13117 558 aaKnown RBP10.85□□□□□ -0.67
COL4A2-209ENST00000494852 TMEM78Q5T7P6 136 aa10.85□□□□□ -0.67
COL4A2-209ENST00000494852 PQLC2Q6ZP29 291 aa10.85□□□□□ -0.67
COL4A2-209ENST00000494852 VSIG2Q96IQ7 327 aa10.85□□□□□ -0.67
COL4A2-209ENST00000494852 PYGO2Q9BRQ0 406 aa10.85□□□□□ -0.67
COL4A2-209ENST00000494852 ZNF492Q9P255 531 aa10.85□□□□□ -0.67
COL4A2-209ENST00000494852 TNFSF18Q9UNG2 199 aa10.85□□□□□ -0.67
COL4A2-209ENST00000494852 FLG2Q5D862 2391 aaPredicted RBP10.84□□□□□ -0.67
COL4A2-209ENST00000494852 FXYD6-FXYD2A0A087WZ82 144 aa10.84□□□□□ -0.67
COL4A2-209ENST00000494852 G3V3Q6 166 aa10.84□□□□□ -0.67
COL4A2-209ENST00000494852 ZNF324O75467 553 aaPredicted RBP10.84□□□□□ -0.67
COL4A2-209ENST00000494852 ATP6V0CP27449 155 aa10.84□□□□□ -0.67
COL4A2-209ENST00000494852 KRTAP10-1P60331 282 aa10.84□□□□□ -0.67
COL4A2-209ENST00000494852 CD300CQ08708 224 aa10.84□□□□□ -0.67
COL4A2-209ENST00000494852 C18orf15Q96N68 181 aa10.84□□□□□ -0.67
COL4A2-209ENST00000494852 TMPRSS5Q9H3S3 457 aa10.84□□□□□ -0.67
COL4A2-209ENST00000494852 RBAKDNA6NC62 111 aa10.83□□□□□ -0.68
COL4A2-209ENST00000494852 GPX1P07203 203 aa10.83□□□□□ -0.68
COL4A2-209ENST00000494852 ZNF138P52744 262 aa10.83□□□□□ -0.68
COL4A2-209ENST00000494852 SERF2P84101 59 aa10.83□□□□□ -0.68
COL4A2-209ENST00000494852 BTN1A1Q13410 526 aa10.83□□□□□ -0.68
COL4A2-209ENST00000494852 NFE4Q86UQ8 179 aa10.83□□□□□ -0.68
COL4A2-209ENST00000494852 ZFAND2AQ8N6M9 145 aa10.83□□□□□ -0.68
COL4A2-209ENST00000494852 A0A087WTM6 91 aa10.82□□□□□ -0.68
COL4A2-209ENST00000494852 TRBV7-9A0A0J9YWB2 115 aa10.82□□□□□ -0.68
COL4A2-209ENST00000494852 DIRC3C9JPN6 131 aa10.82□□□□□ -0.68
COL4A2-209ENST00000494852 HMGB3O15347 200 aaKnown RBP10.82□□□□□ -0.68
COL4A2-209ENST00000494852 MBP02144 154 aa10.82□□□□□ -0.68
COL4A2-209ENST00000494852 STAG3L2P0CL84 134 aa10.82□□□□□ -0.68
COL4A2-209ENST00000494852 STAG3L3P0CL85 134 aa10.82□□□□□ -0.68
COL4A2-209ENST00000494852 RNASE4P34096 147 aaKnown RBP10.82□□□□□ -0.68
COL4A2-209ENST00000494852 CDC34P49427 236 aaPredicted RBP10.82□□□□□ -0.68
COL4A2-209ENST00000494852 RPL7L1Q6DKI1 246 aaKnown RBP10.82□□□□□ -0.68
COL4A2-209ENST00000494852 Q6ZTI0 123 aa10.82□□□□□ -0.68
COL4A2-209ENST00000494852 LINC00467Q9BRT7 94 aa10.82□□□□□ -0.68
COL4A2-209ENST00000494852 SH3BGRL3Q9H299 93 aa10.82□□□□□ -0.68
COL4A2-209ENST00000494852 OTORQ9NRC9 128 aa10.82□□□□□ -0.68
COL4A2-209ENST00000494852 PGPA6NDG6 321 aa10.81□□□□□ -0.68
COL4A2-209ENST00000494852 NXPH4O95158 308 aa10.81□□□□□ -0.68
COL4A2-209ENST00000494852 PRR9Q5T870 116 aa10.81□□□□□ -0.68
COL4A2-209ENST00000494852 Q8TAT8 98 aa10.81□□□□□ -0.68
COL4A2-209ENST00000494852 BORCS7-ASMTA0A0B4J1R7 106 aa10.8□□□□□ -0.68
COL4A2-209ENST00000494852 FAM229AH3BQW9 127 aa10.8□□□□□ -0.68
COL4A2-209ENST00000494852 SMR3BP02814 79 aaPredicted RBP10.8□□□□□ -0.68
COL4A2-209ENST00000494852 ARL14EPLP0DKL9 152 aa10.8□□□□□ -0.68
COL4A2-209ENST00000494852 ANXA2RQ3ZCQ2 193 aa10.8□□□□□ -0.68
COL4A2-209ENST00000494852 FAM74A1Q5RGS3 127 aa10.8□□□□□ -0.68
COL4A2-209ENST00000494852 ARL6IP6Q8N6S5 226 aa10.8□□□□□ -0.68
COL4A2-209ENST00000494852 RAB24Q969Q5 203 aa10.8□□□□□ -0.68
COL4A2-209ENST00000494852 HYLS1Q96M11 299 aa10.8□□□□□ -0.68
COL4A2-209ENST00000494852 MDFICQ9P1T7 246 aa10.8□□□□□ -0.68
COL4A2-209ENST00000494852 TNFRSF18Q9Y5U5 241 aa10.8□□□□□ -0.68
COL4A2-209ENST00000494852 TRGV2A0A075B6R0 118 aa10.79□□□□□ -0.68
COL4A2-209ENST00000494852 DNAH10OSP0CZ25 163 aa10.79□□□□□ -0.68
COL4A2-209ENST00000494852 EIF4E3Q8N5X7 224 aaKnown RBP10.79□□□□□ -0.68
COL4A2-209ENST00000494852 ZNF680Q8NEM1 530 aa10.79□□□□□ -0.68
COL4A2-209ENST00000494852 CMTM2Q8TAZ6 248 aa10.79□□□□□ -0.68
COL4A2-209ENST00000494852 SUN5Q8TC36 379 aa10.79□□□□□ -0.68
COL4A2-209ENST00000494852 ARPC5O15511 151 aa10.78□□□□□ -0.68
COL4A2-209ENST00000494852 GCSHP23434 173 aa10.78□□□□□ -0.68
COL4A2-209ENST00000494852 Q6ZQT7 251 aa10.78□□□□□ -0.68
COL4A2-209ENST00000494852 C11orf72Q8NBR9 251 aa10.78□□□□□ -0.68
COL4A2-209ENST00000494852 TMED6Q8WW62 240 aa10.78□□□□□ -0.68
COL4A2-209ENST00000494852 ACTR3CQ9C0K3 210 aaPredicted RBP10.78□□□□□ -0.68
COL4A2-209ENST00000494852 GSN-AS1Q9NRJ2 163 aa10.78□□□□□ -0.68
COL4A2-209ENST00000494852 LENEPQ9Y5L5 61 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms