RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 OR10J4P0C629 311 aa15.87■□□□□ 0.13
COL27A1-208ENST00000494780 LYPD5Q6UWN5 251 aa15.87■□□□□ 0.13
COL27A1-208ENST00000494780 C8orf49Q96NF6 230 aa15.87■□□□□ 0.13
COL27A1-208ENST00000494780 RBAKDNA6NC62 111 aa15.86■□□□□ 0.13
COL27A1-208ENST00000494780 CSN1S1P47710 185 aa15.86■□□□□ 0.13
COL27A1-208ENST00000494780 ERVFC1-1P60608 527 aa15.86■□□□□ 0.13
COL27A1-208ENST00000494780 Q8TAT8 98 aa15.86■□□□□ 0.13
COL27A1-208ENST00000494780 PHYHIPLQ96FC7 376 aa15.86■□□□□ 0.13
COL27A1-208ENST00000494780 WDR61Q9GZS3 305 aaKnown RBP15.86■□□□□ 0.13
COL27A1-208ENST00000494780 PRAF2O60831 178 aa15.85■□□□□ 0.13
COL27A1-208ENST00000494780 ZNF266Q14584 549 aa15.85■□□□□ 0.13
COL27A1-208ENST00000494780 NEGR1Q7Z3B1 354 aa15.85■□□□□ 0.13
COL27A1-208ENST00000494780 NFE4Q86UQ8 179 aa15.85■□□□□ 0.13
COL27A1-208ENST00000494780 LYPD1Q8N2G4 141 aa15.85■□□□□ 0.13
COL27A1-208ENST00000494780 NMES1Q9C002 83 aa15.85■□□□□ 0.13
COL27A1-208ENST00000494780 C17orf112F2Z3M2 114 aa15.84■□□□□ 0.13
COL27A1-208ENST00000494780 ASAH1Q13510 395 aa15.84■□□□□ 0.13
COL27A1-208ENST00000494780 PTTG2Q9NZH5 202 aa15.84■□□□□ 0.13
COL27A1-208ENST00000494780 OR5AC2Q9NZP5 309 aa15.84■□□□□ 0.13
COL27A1-208ENST00000494780 TRAV9-2A0A087WT02 112 aa15.83■□□□□ 0.12
COL27A1-208ENST00000494780 OR7C2O60412 319 aa15.83■□□□□ 0.12
COL27A1-208ENST00000494780 SIX6O95475 246 aa15.83■□□□□ 0.12
COL27A1-208ENST00000494780 CDPF1Q6NVV7 123 aa15.83■□□□□ 0.12
COL27A1-208ENST00000494780 IQCF2Q8IXL9 164 aa15.83■□□□□ 0.12
COL27A1-208ENST00000494780 TRGV4A0A0C4DH28 118 aa15.82■□□□□ 0.12
COL27A1-208ENST00000494780 RANP62826 216 aaKnown RBP15.82■□□□□ 0.12
COL27A1-208ENST00000494780 MUC21Q5SSG8 566 aa15.82■□□□□ 0.12
COL27A1-208ENST00000494780 LINC00299Q6ZSB3 139 aa15.82■□□□□ 0.12
COL27A1-208ENST00000494780 MDFICQ9P1T7 246 aa15.82■□□□□ 0.12
COL27A1-208ENST00000494780 LENEPQ9Y5L5 61 aa15.82■□□□□ 0.12
COL27A1-208ENST00000494780 TNFRSF18Q9Y5U5 241 aa15.82■□□□□ 0.12
COL27A1-208ENST00000494780 H0YIZ8 118 aa15.81■□□□□ 0.12
COL27A1-208ENST00000494780 CYCSP99999 105 aaKnown RBP15.81■□□□□ 0.12
COL27A1-208ENST00000494780 LRRC37A5PQ49AS3 106 aa15.81■□□□□ 0.12
COL27A1-208ENST00000494780 Q6AWC8 147 aa15.81■□□□□ 0.12
COL27A1-208ENST00000494780 OR10G4Q8NGN3 311 aa15.81■□□□□ 0.12
COL27A1-208ENST00000494780 RASL10AQ92737 203 aa15.81■□□□□ 0.12
COL27A1-208ENST00000494780 SPXQ9BT56 116 aa15.81■□□□□ 0.12
COL27A1-208ENST00000494780 LY96Q9Y6Y9 160 aa15.81■□□□□ 0.12
COL27A1-208ENST00000494780 K7EP13 123 aa15.8■□□□□ 0.12
COL27A1-208ENST00000494780 K7EQD1 137 aa15.8■□□□□ 0.12
COL27A1-208ENST00000494780 SRIP30626 198 aa15.8■□□□□ 0.12
COL27A1-208ENST00000494780 UBE2L3P68036 154 aaKnown RBP15.8■□□□□ 0.12
COL27A1-208ENST00000494780 ZNF479Q96JC4 524 aa15.8■□□□□ 0.12
COL27A1-208ENST00000494780 TRGV11A0A075B6L2 103 aa15.79■□□□□ 0.12
COL27A1-208ENST00000494780 ORM1P02763 201 aa15.79■□□□□ 0.12
COL27A1-208ENST00000494780 SFTA3P0C7M3 94 aa15.79■□□□□ 0.12
COL27A1-208ENST00000494780 FAM159AQ6UWV7 190 aa15.79■□□□□ 0.12
COL27A1-208ENST00000494780 ENKURQ8TC29 256 aa15.79■□□□□ 0.12
COL27A1-208ENST00000494780 PCNPQ8WW12 178 aaKnown RBP15.79■□□□□ 0.12
COL27A1-208ENST00000494780 S100ZQ8WXG8 99 aa15.79■□□□□ 0.12
COL27A1-208ENST00000494780 ATP5SQ99766 215 aa15.79■□□□□ 0.12
COL27A1-208ENST00000494780 EPM2AB3EWF7 344 aa15.78■□□□□ 0.12
COL27A1-208ENST00000494780 DIRC3C9JPN6 131 aa15.78■□□□□ 0.12
COL27A1-208ENST00000494780 TMEM183BQ1AE95 376 aa15.78■□□□□ 0.12
COL27A1-208ENST00000494780 TMEM183AQ8IXX5 376 aa15.78■□□□□ 0.12
COL27A1-208ENST00000494780 A0A087WTM6 91 aa15.77■□□□□ 0.12
COL27A1-208ENST00000494780 GYPEP15421 78 aa15.77■□□□□ 0.12
COL27A1-208ENST00000494780 KHDC3LQ587J8 217 aa15.77■□□□□ 0.12
COL27A1-208ENST00000494780 FFAR4Q5NUL3 377 aa15.77■□□□□ 0.12
COL27A1-208ENST00000494780 TMED6Q8WW62 240 aa15.77■□□□□ 0.12
COL27A1-208ENST00000494780 MSRB1Q9NZV6 116 aa15.77■□□□□ 0.12
COL27A1-208ENST00000494780 EVI2AP22794 236 aa15.76■□□□□ 0.11
COL27A1-208ENST00000494780 FUSP35637 526 aaKnown RBP eCLIP15.76■□□□□ 0.11
COL27A1-208ENST00000494780 TAS2R45P59539 299 aa15.76■□□□□ 0.11
COL27A1-208ENST00000494780 WFDC10BQ8IUB3 73 aa15.76■□□□□ 0.11
COL27A1-208ENST00000494780 DNAH10OSP0CZ25 163 aa15.75■□□□□ 0.11
COL27A1-208ENST00000494780 TDRG1Q3Y452 100 aa15.75■□□□□ 0.11
COL27A1-208ENST00000494780 TXNDC17Q9BRA2 123 aa15.75■□□□□ 0.11
COL27A1-208ENST00000494780 TRAV4A0A0B4J268 109 aa15.74■□□□□ 0.11
COL27A1-208ENST00000494780 C9JCJ5 164 aa15.74■□□□□ 0.11
COL27A1-208ENST00000494780 XGP55808 180 aa15.74■□□□□ 0.11
COL27A1-208ENST00000494780 PPP1R1CQ8WVI7 109 aa15.74■□□□□ 0.11
COL27A1-208ENST00000494780 HSPB11Q9Y547 144 aa15.74■□□□□ 0.11
COL27A1-208ENST00000494780 IFNA5P01569 189 aa15.73■□□□□ 0.11
COL27A1-208ENST00000494780 H2BFSP57053 126 aa15.73■□□□□ 0.11
COL27A1-208ENST00000494780 CMTM2Q8TAZ6 248 aa15.73■□□□□ 0.11
COL27A1-208ENST00000494780 SCGB1C1Q8TD33 95 aa15.73■□□□□ 0.11
COL27A1-208ENST00000494780 HYLS1Q96M11 299 aa15.73■□□□□ 0.11
COL27A1-208ENST00000494780 OTORQ9NRC9 128 aa15.73■□□□□ 0.11
COL27A1-208ENST00000494780 NAGKQ9UJ70 344 aa15.73■□□□□ 0.11
COL27A1-208ENST00000494780 INMT-MINDY4F8WBC2 141 aa15.72■□□□□ 0.11
COL27A1-208ENST00000494780 UPK1BO75841 260 aa15.72■□□□□ 0.11
COL27A1-208ENST00000494780 FAM74A1Q5RGS3 127 aa15.72■□□□□ 0.11
COL27A1-208ENST00000494780 OR4C5Q8NGB2 326 aa15.72■□□□□ 0.11
COL27A1-208ENST00000494780 PGPA6NDG6 321 aa15.71■□□□□ 0.11
COL27A1-208ENST00000494780 M0R2P5 195 aa15.71■□□□□ 0.11
COL27A1-208ENST00000494780 PET100P0DJ07 73 aa15.71■□□□□ 0.11
COL27A1-208ENST00000494780 SH2D6Q7Z4S9 175 aa15.71■□□□□ 0.11
COL27A1-208ENST00000494780 C10orf126Q8N4M7 172 aa15.71■□□□□ 0.11
COL27A1-208ENST00000494780 ARL6IP6Q8N6S5 226 aa15.71■□□□□ 0.11
COL27A1-208ENST00000494780 MBD2Q9UBB5 411 aa15.71■□□□□ 0.11
COL27A1-208ENST00000494780 TRAV21A0A0B4J279 112 aa15.7■□□□□ 0.1
COL27A1-208ENST00000494780 IGHV3-16A0A0C4DH30 117 aa15.7■□□□□ 0.1
COL27A1-208ENST00000494780 GNRH2O43555 120 aa15.7■□□□□ 0.1
COL27A1-208ENST00000494780 MPC2O95563 127 aa15.7■□□□□ 0.1
COL27A1-208ENST00000494780 KRTAP10-1P60331 282 aa15.7■□□□□ 0.1
COL27A1-208ENST00000494780 RPH3ALQ9UNE2 315 aa15.7■□□□□ 0.1
COL27A1-208ENST00000494780 CRYGDP07320 174 aa15.69■□□□□ 0.1
COL27A1-208ENST00000494780 RPL12P30050 165 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms