RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 PATE2Q6UY27 113 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 C16orf47Q6ZP98 133 aaPredicted RBP2.13□□□□□ -2.07
MDC1-208ENST00000494654 Q6ZQT7 251 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 LINC00305Q7Z4B0 112 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 COX8CQ7Z4L0 72 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 FAM19A5Q7Z5A7 132 aaPredicted RBP2.13□□□□□ -2.07
MDC1-208ENST00000494654 GGNQ86UU5 652 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 C17orf82Q86X59 251 aaPredicted RBP2.13□□□□□ -2.07
MDC1-208ENST00000494654 NDUFA11Q86Y39 141 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 ARL17AQ8IVW1 177 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 AMN1Q8IY45 258 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 MAPKAPK5-AS1Q8N8E1 139 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 Q8N8P6 123 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 DEFB124Q8NES8 71 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 IGFBPL1Q8WX77 278 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 SRSF12Q8WXF0 261 aaKnown RBP2.13□□□□□ -2.07
MDC1-208ENST00000494654 LINC00526Q96FQ7 95 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 C20orf173Q96LM9 149 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 CCDC140Q96MF4 163 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 DUX5Q96PT3 197 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 CNFNQ9BYD5 112 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 FSCN3Q9NQT6 498 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 ZNF71Q9NQZ8 489 aaPredicted RBP2.13□□□□□ -2.07
MDC1-208ENST00000494654 MRPL35Q9NZE8 188 aaKnown RBP2.13□□□□□ -2.07
MDC1-208ENST00000494654 HIGD1AQ9Y241 93 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 CELSR3Q9NYQ7 3312 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 MAST4O15021 2626 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 ITPR1Q14643 2758 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 TENM4Q6N022 2769 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 CNOT1A5YKK6 2376 aaKnown RBP2.13□□□□□ -2.07
MDC1-208ENST00000494654 NAV2Q8IVL1 2488 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 CACNA1DQ01668 2161 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 TMSB15BA0A087X1C1 80 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 IGHV1-45A0A0A0MS14 117 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 TRAV8-1A0A0A6YYK1 113 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 TRAV40A0A0B4J280 105 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 IGHV3-20A0A0C4DH32 117 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 TRBV10-2A0A0K0K1G8 114 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 LOC389332A0A1B0GUA5 103 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 ZNF815PA8K554 130 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 PATE3B3GLJ2 98 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 H7C1H1 209 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 ZNF561-AS1K7EIQ3 104 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 K7EMI3 77 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 ATOX1O00244 68 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 OVOL1O14753 267 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 TIMM23O14925 209 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 PROP1O75360 226 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 IGHV3-13P01766 116 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 ORM1P02763 201 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 ACYP1P07311 99 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 PRSS1P07477 247 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 PATE4P0C8F1 98 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 SAA2P0DJI9 122 aaPredicted RBP2.12□□□□□ -2.07
MDC1-208ENST00000494654 COX7CP15954 63 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 MALP21145 153 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 COL8A2P25067 703 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 CD40P25942 277 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 CKS2P33552 79 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 LEPP41159 167 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 CXCL5P42830 114 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 SSR4P51571 173 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 DLX6P56179 175 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 B3GALT5-AS1P59052 145 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 HERVK_113P61574 105 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 EDDM3AQ14507 147 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 LINC01620Q4KN68 170 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 RPL39P5Q59GN2 51 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 FAM201AQ5SY85 155 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 PVRIGQ6DKI7 326 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 HIST2H2BCQ6DN03 193 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 ZNF474Q6S9Z5 364 aaPredicted RBP2.12□□□□□ -2.07
MDC1-208ENST00000494654 Q6ZS52 159 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 IL17RELQ6ZVW7 336 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 PRNTQ86SH4 94 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 DTX2Q86UW9 622 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 LYPD1Q8N2G4 141 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 ZCCHC24Q8N2G6 241 aaKnown RBP2.12□□□□□ -2.07
MDC1-208ENST00000494654 POM121L12Q8N7R1 296 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 NTN5Q8WTR8 489 aaPredicted RBP2.12□□□□□ -2.07
MDC1-208ENST00000494654 RNF185Q96GF1 192 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 SGK494Q96LW2 274 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 PRRG4Q9BZD6 226 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 PLA2G2FQ9BZM2 168 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 AAMDCQ9H7C9 122 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 OBP2BQ9NPH6 170 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 FZR1Q9UM11 496 aa2.12□□□□□ -2.07
MDC1-208ENST00000494654 ASH1LQ9NR48 2969 aaKnown RBP2.12□□□□□ -2.07
MDC1-208ENST00000494654 ASXL3Q9C0F0 2248 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 IGSF10Q6WRI0 2623 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 HECTD1Q9ULT8 2610 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.11□□□□□ -2.07
MDC1-208ENST00000494654 A0A0J9YY99 117 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 LOC107984640A0A0U1RRK4 108 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 RBAKDNA6NC62 111 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 LINC01548A6NM66 108 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 H3BRN7 92 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 H3BVH4 76 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 K7EM74 188 aa2.11□□□□□ -2.07
MDC1-208ENST00000494654 MRPS12O15235 138 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms