RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 KLF12Q9Y4X4 402 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 HSPB11Q9Y547 144 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 TRGV2A0A075B6R0 118 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 TRGV1A0A0A0MS02 117 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 OR7C2O60412 319 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 IFNA5P01569 189 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 RPL12P30050 165 aaKnown RBP6.67□□□□□ -1.34
MSH5-218ENST00000494646 FAM3BP58499 235 aaPredicted RBP6.67□□□□□ -1.34
MSH5-218ENST00000494646 DEFA1P59665 94 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 DEFA3P59666 94 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 DAZ2Q13117 558 aaKnown RBP6.67□□□□□ -1.34
MSH5-218ENST00000494646 ESRGQ1W209 222 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 C11orf72Q8NBR9 251 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 SCGB1C1Q8TD33 95 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 RXFP4Q8TDU9 374 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 ZNF503Q96F45 646 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 ATP5SQ99766 215 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 MRPL32Q9BYC8 188 aaKnown RBP6.67□□□□□ -1.34
MSH5-218ENST00000494646 Q9H8V8 135 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 WFDC1Q9HC57 220 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 AP5S1Q9NUS5 200 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 ZNF492Q9P255 531 aa6.67□□□□□ -1.34
MSH5-218ENST00000494646 IGHV1OR15-1A0A075B7D0 117 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 IGHV3-53P01767 116 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 CRISP2P16562 243 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 ZNF138P52744 262 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 ANXA2RQ3ZCQ2 193 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 CDPF1Q6NVV7 123 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 ZNF575Q86XF7 245 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 C6orf223Q8N319 242 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 ZFAND2AQ8N6M9 145 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 Q8TAT8 98 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 HYLS1Q96M11 299 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 Q9H3A6 140 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 KCNIP2Q9NS61 270 aa6.66□□□□□ -1.34
MSH5-218ENST00000494646 PGPA6NDG6 321 aa6.65□□□□□ -1.34
MSH5-218ENST00000494646 HMGB3O15347 200 aaKnown RBP6.65□□□□□ -1.34
MSH5-218ENST00000494646 SPINK4O60575 86 aa6.65□□□□□ -1.34
MSH5-218ENST00000494646 CSN1S1P47710 185 aa6.65□□□□□ -1.34
MSH5-218ENST00000494646 UBE2L3P68036 154 aaKnown RBP6.65□□□□□ -1.34
MSH5-218ENST00000494646 MUC21Q5SSG8 566 aa6.65□□□□□ -1.34
MSH5-218ENST00000494646 ZNF680Q8NEM1 530 aa6.65□□□□□ -1.34
MSH5-218ENST00000494646 VSIG2Q96IQ7 327 aa6.65□□□□□ -1.34
MSH5-218ENST00000494646 LINC00467Q9BRT7 94 aa6.65□□□□□ -1.34
MSH5-218ENST00000494646 MRPL16Q9NX20 251 aaKnown RBP6.65□□□□□ -1.34
MSH5-218ENST00000494646 MBD2Q9UBB5 411 aa6.65□□□□□ -1.34
MSH5-218ENST00000494646 RPH3ALQ9UNE2 315 aa6.65□□□□□ -1.34
MSH5-218ENST00000494646 DNAH8Q96JB1 4490 aa6.65□□□□□ -1.34
MSH5-218ENST00000494646 DIRC3C9JPN6 131 aa6.64□□□□□ -1.35
MSH5-218ENST00000494646 NMBP08949 121 aa6.64□□□□□ -1.35
MSH5-218ENST00000494646 PET100P0DJ07 73 aa6.64□□□□□ -1.35
MSH5-218ENST00000494646 MED14OSP0DP75 135 aa6.64□□□□□ -1.35
MSH5-218ENST00000494646 ALG5Q9Y673 324 aa6.64□□□□□ -1.35
MSH5-218ENST00000494646 A0A096LPF7 62 aa6.63□□□□□ -1.35
MSH5-218ENST00000494646 A0A1W2PPV4 95 aa6.63□□□□□ -1.35
MSH5-218ENST00000494646 TCL1AP56279 114 aa6.63□□□□□ -1.35
MSH5-218ENST00000494646 TAS2R45P59539 299 aa6.63□□□□□ -1.35
MSH5-218ENST00000494646 RAB2AP61019 212 aa6.63□□□□□ -1.35
MSH5-218ENST00000494646 ACOT6Q3I5F7 207 aaPredicted RBP6.63□□□□□ -1.35
MSH5-218ENST00000494646 KHDC3LQ587J8 217 aa6.63□□□□□ -1.35
MSH5-218ENST00000494646 LYPD1Q8N2G4 141 aa6.63□□□□□ -1.35
MSH5-218ENST00000494646 MDFICQ9P1T7 246 aa6.63□□□□□ -1.35
MSH5-218ENST00000494646 H3BNG1 76 aa6.62□□□□□ -1.35
MSH5-218ENST00000494646 PAX4O43316 350 aa6.62□□□□□ -1.35
MSH5-218ENST00000494646 ZNF266Q14584 549 aa6.62□□□□□ -1.35
MSH5-218ENST00000494646 ZNF674Q2M3X9 581 aa6.62□□□□□ -1.35
MSH5-218ENST00000494646 IBA57Q5T440 356 aaKnown RBP6.62□□□□□ -1.35
MSH5-218ENST00000494646 OR10G4Q8NGN3 311 aa6.62□□□□□ -1.35
MSH5-218ENST00000494646 OR10G9Q8NGN4 311 aa6.62□□□□□ -1.35
MSH5-218ENST00000494646 OR10G7Q8NGN6 311 aa6.62□□□□□ -1.35
MSH5-218ENST00000494646 SGK494Q96LW2 274 aa6.62□□□□□ -1.35
MSH5-218ENST00000494646 KRTAP1-5Q9BYS1 174 aa6.62□□□□□ -1.35
MSH5-218ENST00000494646 HHLA3Q9XRX5 114 aa6.62□□□□□ -1.35
MSH5-218ENST00000494646 RBAKDNA6NC62 111 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 GNRH2O43555 120 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 ZNF415Q09FC8 603 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 FHL2Q14192 279 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 TMEM183BQ1AE95 376 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 FAM159AQ6UWV7 190 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 GOLT1AQ6ZVE7 132 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 TMEM183AQ8IXX5 376 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 CMTM2Q8TAZ6 248 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 ST6GAL2Q96JF0 529 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 C18orf15Q96N68 181 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 C8orf49Q96NF6 230 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 BATF3Q9NR55 127 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 OTORQ9NRC9 128 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 NAGKQ9UJ70 344 aa6.61□□□□□ -1.35
MSH5-218ENST00000494646 MRPS16Q9Y3D3 137 aaKnown RBP6.61□□□□□ -1.35
MSH5-218ENST00000494646 FAT1Q14517 4588 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 TRAV8-1A0A0A6YYK1 113 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 TRBV7-9A0A0J9YWB2 115 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 C16orf90A8MZG2 172 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 SFTA3P0C7M3 94 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 CRYBA4P53673 196 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 GNG5P63218 68 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 Q5BKY6 102 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 FAM74A1Q5RGS3 127 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 HSD17B11Q8NBQ5 300 aa6.6□□□□□ -1.35
MSH5-218ENST00000494646 ZNF479Q96JC4 524 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms