RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 OR10J4P0C629 311 aa8.61□□□□□ -1.03
SKA1-205ENST00000494518 SFTA3P0C7M3 94 aa8.61□□□□□ -1.03
SKA1-205ENST00000494518 CRISP2P16562 243 aa8.61□□□□□ -1.03
SKA1-205ENST00000494518 CRYBA4P53673 196 aa8.61□□□□□ -1.03
SKA1-205ENST00000494518 HBG1P69891 147 aa8.61□□□□□ -1.03
SKA1-205ENST00000494518 HBG2P69892 147 aa8.61□□□□□ -1.03
SKA1-205ENST00000494518 FHL2Q14192 279 aa8.61□□□□□ -1.03
SKA1-205ENST00000494518 CNPY1Q3B7I2 92 aa8.61□□□□□ -1.03
SKA1-205ENST00000494518 MUC21Q5SSG8 566 aa8.61□□□□□ -1.03
SKA1-205ENST00000494518 LYPD5Q6UWN5 251 aa8.61□□□□□ -1.03
SKA1-205ENST00000494518 NPCDR1Q9BY65 106 aa8.61□□□□□ -1.03
SKA1-205ENST00000494518 XGP55808 180 aa8.6□□□□□ -1.03
SKA1-205ENST00000494518 ZNF415Q09FC8 603 aa8.6□□□□□ -1.03
SKA1-205ENST00000494518 PDE6HQ13956 83 aa8.6□□□□□ -1.03
SKA1-205ENST00000494518 IBA57Q5T440 356 aaKnown RBP8.6□□□□□ -1.03
SKA1-205ENST00000494518 PHYHIPLQ96FC7 376 aa8.6□□□□□ -1.03
SKA1-205ENST00000494518 FAM167A-AS1Q96KT0 104 aa8.6□□□□□ -1.03
SKA1-205ENST00000494518 PTTG2Q9NZH5 202 aa8.6□□□□□ -1.03
SKA1-205ENST00000494518 ZNF492Q9P255 531 aa8.6□□□□□ -1.03
SKA1-205ENST00000494518 PRO0255Q9UI72 69 aa8.6□□□□□ -1.03
SKA1-205ENST00000494518 HHLA3Q9XRX5 114 aa8.6□□□□□ -1.03
SKA1-205ENST00000494518 DNAH8Q96JB1 4490 aa8.59□□□□□ -1.03
SKA1-205ENST00000494518 A0A087WTM6 91 aa8.59□□□□□ -1.03
SKA1-205ENST00000494518 TRGV4A0A0C4DH28 118 aa8.59□□□□□ -1.03
SKA1-205ENST00000494518 H2AFB2P0C5Z0 115 aa8.59□□□□□ -1.03
SKA1-205ENST00000494518 NBEAP1P0C6P0 100 aa8.59□□□□□ -1.03
SKA1-205ENST00000494518 INAFM2P0DMQ5 153 aa8.59□□□□□ -1.03
SKA1-205ENST00000494518 KRTAP10-1P60331 282 aa8.59□□□□□ -1.03
SKA1-205ENST00000494518 HAMPP81172 84 aa8.59□□□□□ -1.03
SKA1-205ENST00000494518 NHLH2Q02577 135 aa8.59□□□□□ -1.03
SKA1-205ENST00000494518 IL15RAQ13261 267 aa8.59□□□□□ -1.03
SKA1-205ENST00000494518 WFDC10BQ8IUB3 73 aa8.59□□□□□ -1.03
SKA1-205ENST00000494518 MDFICQ9P1T7 246 aa8.59□□□□□ -1.03
SKA1-205ENST00000494518 ZNF138P52744 262 aa8.58□□□□□ -1.04
SKA1-205ENST00000494518 MRPL23Q16540 153 aaKnown RBP8.58□□□□□ -1.04
SKA1-205ENST00000494518 ATP6V1FQ16864 119 aa8.58□□□□□ -1.04
SKA1-205ENST00000494518 Q5VSD8 79 aa8.58□□□□□ -1.04
SKA1-205ENST00000494518 NEGR1Q7Z3B1 354 aa8.58□□□□□ -1.04
SKA1-205ENST00000494518 LYPD1Q8N2G4 141 aa8.58□□□□□ -1.04
SKA1-205ENST00000494518 OR5C1Q8NGR4 320 aa8.58□□□□□ -1.04
SKA1-205ENST00000494518 CHAC2Q8WUX2 184 aa8.58□□□□□ -1.04
SKA1-205ENST00000494518 FXYD5Q96DB9 178 aa8.58□□□□□ -1.04
SKA1-205ENST00000494518 ZNF479Q96JC4 524 aa8.58□□□□□ -1.04
SKA1-205ENST00000494518 PAXXQ9BUH6 204 aa8.58□□□□□ -1.04
SKA1-205ENST00000494518 OR51M1Q9H341 326 aa8.58□□□□□ -1.04
SKA1-205ENST00000494518 LY96Q9Y6Y9 160 aa8.58□□□□□ -1.04
SKA1-205ENST00000494518 SRRM2Q9UQ35 2752 aaKnown RBP8.58□□□□□ -1.04
SKA1-205ENST00000494518 K7EQD1 137 aa8.57□□□□□ -1.04
SKA1-205ENST00000494518 EIF3GO75821 320 aaKnown RBP eCLIP8.57□□□□□ -1.04
SKA1-205ENST00000494518 SIX6O95475 246 aa8.57□□□□□ -1.04
SKA1-205ENST00000494518 SMR3BP02814 79 aaPredicted RBP8.57□□□□□ -1.04
SKA1-205ENST00000494518 GYPEP15421 78 aa8.57□□□□□ -1.04
SKA1-205ENST00000494518 SRIP30626 198 aa8.57□□□□□ -1.04
SKA1-205ENST00000494518 TMEM183BQ1AE95 376 aa8.57□□□□□ -1.04
SKA1-205ENST00000494518 TMEM183AQ8IXX5 376 aa8.57□□□□□ -1.04
SKA1-205ENST00000494518 Q8N3U1 123 aa8.57□□□□□ -1.04
SKA1-205ENST00000494518 NAGKQ9UJ70 344 aa8.57□□□□□ -1.04
SKA1-205ENST00000494518 OR7C2O60412 319 aa8.56□□□□□ -1.04
SKA1-205ENST00000494518 IFNA5P01569 189 aa8.56□□□□□ -1.04
SKA1-205ENST00000494518 NMBP08949 121 aa8.56□□□□□ -1.04
SKA1-205ENST00000494518 RANP62826 216 aaKnown RBP8.56□□□□□ -1.04
SKA1-205ENST00000494518 SLAQ13239 276 aa8.56□□□□□ -1.04
SKA1-205ENST00000494518 LRRC37A5PQ49AS3 106 aa8.56□□□□□ -1.04
SKA1-205ENST00000494518 CDPF1Q6NVV7 123 aa8.56□□□□□ -1.04
SKA1-205ENST00000494518 NFE4Q86UQ8 179 aa8.56□□□□□ -1.04
SKA1-205ENST00000494518 PCNPQ8WW12 178 aaKnown RBP8.56□□□□□ -1.04
SKA1-205ENST00000494518 OR5AC2Q9NZP5 309 aa8.56□□□□□ -1.04
SKA1-205ENST00000494518 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
SKA1-205ENST00000494518 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
SKA1-205ENST00000494518 LOC100131303A0A0U1RQF7 123 aa8.55□□□□□ -1.04
SKA1-205ENST00000494518 FAM240BA0A1B0GVZ2 78 aa8.55□□□□□ -1.04
SKA1-205ENST00000494518 GHRHP01286 108 aa8.55□□□□□ -1.04
SKA1-205ENST00000494518 FRZBQ92765 325 aa8.55□□□□□ -1.04
SKA1-205ENST00000494518 MRPL32Q9BYC8 188 aaKnown RBP8.55□□□□□ -1.04
SKA1-205ENST00000494518 SLC25A31Q9H0C2 315 aa8.55□□□□□ -1.04
SKA1-205ENST00000494518 RPH3ALQ9UNE2 315 aa8.55□□□□□ -1.04
SKA1-205ENST00000494518 FAM229AH3BQW9 127 aa8.54□□□□□ -1.04
SKA1-205ENST00000494518 EVI2AP22794 236 aa8.54□□□□□ -1.04
SKA1-205ENST00000494518 CSN1S1P47710 185 aa8.54□□□□□ -1.04
SKA1-205ENST00000494518 UBE2L3P68036 154 aaKnown RBP8.54□□□□□ -1.04
SKA1-205ENST00000494518 ZNF266Q14584 549 aa8.54□□□□□ -1.04
SKA1-205ENST00000494518 OR10G4Q8NGN3 311 aa8.54□□□□□ -1.04
SKA1-205ENST00000494518 HYLS1Q96M11 299 aa8.54□□□□□ -1.04
SKA1-205ENST00000494518 WDR61Q9GZS3 305 aaKnown RBP8.54□□□□□ -1.04
SKA1-205ENST00000494518 IGHV3-16A0A0C4DH30 117 aa8.53□□□□□ -1.04
SKA1-205ENST00000494518 H0YIZ8 118 aa8.53□□□□□ -1.04
SKA1-205ENST00000494518 CRYGDP07320 174 aa8.53□□□□□ -1.04
SKA1-205ENST00000494518 FAM159AQ6UWV7 190 aa8.53□□□□□ -1.04
SKA1-205ENST00000494518 TRGV11A0A075B6L2 103 aa8.52□□□□□ -1.05
SKA1-205ENST00000494518 DIRC3C9JPN6 131 aa8.52□□□□□ -1.05
SKA1-205ENST00000494518 F6UZH7 168 aa8.52□□□□□ -1.05
SKA1-205ENST00000494518 GNRH2O43555 120 aa8.52□□□□□ -1.05
SKA1-205ENST00000494518 GCSHP23434 173 aa8.52□□□□□ -1.05
SKA1-205ENST00000494518 FFAR4Q5NUL3 377 aa8.52□□□□□ -1.05
SKA1-205ENST00000494518 Q6AWC8 147 aa8.52□□□□□ -1.05
SKA1-205ENST00000494518 NHLRC2Q8NBF2 726 aa8.52□□□□□ -1.05
SKA1-205ENST00000494518 TRAV4A0A0B4J268 109 aa8.51□□□□□ -1.05
SKA1-205ENST00000494518 TRBV7-9A0A0J9YWB2 115 aa8.51□□□□□ -1.05
SKA1-205ENST00000494518 RBAKDNA6NC62 111 aa8.51□□□□□ -1.05
SKA1-205ENST00000494518 ORM1P02763 201 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms