RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PYYP10082 97 aa5.68□□□□□ -1.5
RIF1-211ENST00000494333 HIST1H1EP10412 219 aaKnown RBP5.68□□□□□ -1.5
RIF1-211ENST00000494333 H2BFSP57053 126 aa5.68□□□□□ -1.5
RIF1-211ENST00000494333 ZNF493Q6ZR52 646 aa5.68□□□□□ -1.5
RIF1-211ENST00000494333 EXOC3-AS1Q8N2X6 119 aa5.68□□□□□ -1.5
RIF1-211ENST00000494333 PPP1R1CQ8WVI7 109 aa5.68□□□□□ -1.5
RIF1-211ENST00000494333 C16orf74Q96GX8 76 aa5.68□□□□□ -1.5
RIF1-211ENST00000494333 C20orf144Q9BQM9 153 aa5.68□□□□□ -1.5
RIF1-211ENST00000494333 WDR61Q9GZS3 305 aaKnown RBP5.68□□□□□ -1.5
RIF1-211ENST00000494333 NOP10Q9NPE3 64 aaKnown RBP5.68□□□□□ -1.5
RIF1-211ENST00000494333 TMEM14CQ9P0S9 112 aa5.68□□□□□ -1.5
RIF1-211ENST00000494333 TIMM8BQ9Y5J9 83 aaPredicted RBP5.68□□□□□ -1.5
RIF1-211ENST00000494333 ALMS1Q8TCU4 4167 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 IGLV2-18A0A075B6J9 118 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 IGKV2D-30A0A075B6S6 120 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 TRAV12-3A0A0B4J271 114 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 C17orf112F2Z3M2 114 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 MPC2O95563 127 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 ATP5G1P05496 136 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 NBEAP1P0C6P0 100 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 LEPP41159 167 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 ATP5G3P48201 142 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 ERCC8Q13216 396 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 PDE6HQ13956 83 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 RNF212Q495C1 297 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 GFI1BQ5VTD9 330 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 MIR17HGQ75NE6 70 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 RNASE8Q8TDE3 154 aaKnown RBP5.67□□□□□ -1.5
RIF1-211ENST00000494333 TMEM263Q8WUH6 116 aaKnown RBP5.67□□□□□ -1.5
RIF1-211ENST00000494333 MRPL53Q96EL3 112 aaKnown RBP5.67□□□□□ -1.5
RIF1-211ENST00000494333 SLC25A2Q9BXI2 301 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 OR51M1Q9H341 326 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 BATF3Q9NR55 127 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 PRELID1Q9Y255 219 aa5.67□□□□□ -1.5
RIF1-211ENST00000494333 OR10J4P0C629 311 aa5.66□□□□□ -1.5
RIF1-211ENST00000494333 FAM122CQ6P4D5 195 aa5.66□□□□□ -1.5
RIF1-211ENST00000494333 C15orf53Q8NAA6 179 aa5.66□□□□□ -1.5
RIF1-211ENST00000494333 FAM167A-AS1Q96KT0 104 aa5.66□□□□□ -1.5
RIF1-211ENST00000494333 LINC00477Q96M19 166 aa5.66□□□□□ -1.5
RIF1-211ENST00000494333 ODF3Q96PU9 254 aa5.66□□□□□ -1.5
RIF1-211ENST00000494333 AGPAT4-IT1Q9H0P7 198 aa5.66□□□□□ -1.5
RIF1-211ENST00000494333 SNURFLB1AK76 121 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 GAGE7O76087 117 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 IFNA5P01569 189 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 SLC25A5P05141 298 aaKnown RBP5.65□□□□□ -1.5
RIF1-211ENST00000494333 PRSS2P07478 247 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 GAGE12FP0CL80 117 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 GAGE12GP0CL81 117 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 GAGE12IP0CL82 117 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 PET100P0DJ07 73 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 RPL12P30050 165 aaKnown RBP5.65□□□□□ -1.5
RIF1-211ENST00000494333 RNASE4P34096 147 aaKnown RBP5.65□□□□□ -1.5
RIF1-211ENST00000494333 OR5I1Q13606 314 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 LGALS9BQ3B8N2 356 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 LINC00336Q6ZUF6 198 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 SCGB1C1Q8TD33 95 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 ATP5SQ99766 215 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 PYGO2Q9BRQ0 406 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 ATG101Q9BSB4 218 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 PAXXQ9BUH6 204 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 MRPL32Q9BYC8 188 aaKnown RBP5.65□□□□□ -1.5
RIF1-211ENST00000494333 SMIM3Q9BZL3 60 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 KCNIP2Q9NS61 270 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 FUT9Q9Y231 359 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 HSPB11Q9Y547 144 aa5.65□□□□□ -1.5
RIF1-211ENST00000494333 BIRC6Q9NR09 4857 aa5.65□□□□□ -1.51
RIF1-211ENST00000494333 KMT2AQ03164 3969 aa5.64□□□□□ -1.51
RIF1-211ENST00000494333 IGKV2-40A0A087WW87 121 aaPredicted RBP5.64□□□□□ -1.51
RIF1-211ENST00000494333 C7orf71A4D174 169 aa5.64□□□□□ -1.51
RIF1-211ENST00000494333 OR7C2O60412 319 aa5.64□□□□□ -1.51
RIF1-211ENST00000494333 ZNF324O75467 553 aaPredicted RBP5.64□□□□□ -1.51
RIF1-211ENST00000494333 IGKV2D-40P01614 121 aaPredicted RBP5.64□□□□□ -1.51
RIF1-211ENST00000494333 GPX1P07203 203 aa5.64□□□□□ -1.51
RIF1-211ENST00000494333 RANP62826 216 aaKnown RBP5.64□□□□□ -1.51
RIF1-211ENST00000494333 CD300CQ08708 224 aa5.64□□□□□ -1.51
RIF1-211ENST00000494333 FFAR4Q5NUL3 377 aa5.64□□□□□ -1.51
RIF1-211ENST00000494333 TMEM78Q5T7P6 136 aa5.64□□□□□ -1.51
RIF1-211ENST00000494333 FXYD5Q96DB9 178 aa5.64□□□□□ -1.51
RIF1-211ENST00000494333 FAM19A4Q96LR4 140 aa5.64□□□□□ -1.51
RIF1-211ENST00000494333 VGLL1Q99990 258 aa5.64□□□□□ -1.51
RIF1-211ENST00000494333 MBD2Q9UBB5 411 aa5.64□□□□□ -1.51
RIF1-211ENST00000494333 PAM16Q9Y3D7 125 aa5.64□□□□□ -1.51
RIF1-211ENST00000494333 IGLV5-52A0A0A0MRZ9 124 aa5.63□□□□□ -1.51
RIF1-211ENST00000494333 KLLNB2CW77 178 aa5.63□□□□□ -1.51
RIF1-211ENST00000494333 RTL8CO15255 209 aa5.63□□□□□ -1.51
RIF1-211ENST00000494333 CCL18P55774 89 aa5.63□□□□□ -1.51
RIF1-211ENST00000494333 DAZ2Q13117 558 aaKnown RBP5.63□□□□□ -1.51
RIF1-211ENST00000494333 BTN1A1Q13410 526 aa5.63□□□□□ -1.51
RIF1-211ENST00000494333 Q6ZR54 194 aa5.63□□□□□ -1.51
RIF1-211ENST00000494333 LINC00612Q8N6U2 182 aa5.63□□□□□ -1.51
RIF1-211ENST00000494333 GNPNAT1Q96EK6 184 aaPredicted RBP5.63□□□□□ -1.51
RIF1-211ENST00000494333 PHYHIPLQ96FC7 376 aa5.63□□□□□ -1.51
RIF1-211ENST00000494333 WFDC1Q9HC57 220 aa5.63□□□□□ -1.51
RIF1-211ENST00000494333 GSN-AS1Q9NRJ2 163 aa5.63□□□□□ -1.51
RIF1-211ENST00000494333 ZNF492Q9P255 531 aa5.63□□□□□ -1.51
RIF1-211ENST00000494333 TRAV26-1A0A087WT03 109 aa5.62□□□□□ -1.51
RIF1-211ENST00000494333 A0A0J9YY99 117 aa5.62□□□□□ -1.51
RIF1-211ENST00000494333 EIF3GO75821 320 aaKnown RBP eCLIP5.62□□□□□ -1.51
RIF1-211ENST00000494333 NMBP08949 121 aa5.62□□□□□ -1.51
RIF1-211ENST00000494333 CRISP2P16562 243 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms