RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 TMEM183BQ1AE95 376 aa10.58□□□□□ -0.72
BRCA1-223ENST00000494123 ZNF705AQ6ZN79 300 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-223ENST00000494123 C1orf158Q8N1D5 194 aa10.58□□□□□ -0.72
BRCA1-223ENST00000494123 TMEM256Q8N2U0 113 aa10.58□□□□□ -0.72
BRCA1-223ENST00000494123 LINC01587Q99440 93 aa10.58□□□□□ -0.72
BRCA1-223ENST00000494123 CLLU1Q5K131 121 aa10.57□□□□□ -0.72
BRCA1-223ENST00000494123 PRR9Q5T870 116 aa10.57□□□□□ -0.72
BRCA1-223ENST00000494123 TVP23CQ96ET8 276 aa10.57□□□□□ -0.72
BRCA1-223ENST00000494123 C8orf49Q96NF6 230 aa10.57□□□□□ -0.72
BRCA1-223ENST00000494123 ZFP30Q9Y2G7 519 aa10.57□□□□□ -0.72
BRCA1-223ENST00000494123 U3KQK5 164 aa10.57□□□□□ -0.72
BRCA1-223ENST00000494123 TRBV6-1A0A0K0K1D8 114 aa10.56□□□□□ -0.72
BRCA1-223ENST00000494123 H7BYZ3 331 aa10.56□□□□□ -0.72
BRCA1-223ENST00000494123 RBMY1A1P0DJD3 496 aaKnown RBP10.56□□□□□ -0.72
BRCA1-223ENST00000494123 RBMY1CP0DJD4 496 aa10.56□□□□□ -0.72
BRCA1-223ENST00000494123 RPL35P42766 123 aaKnown RBP10.56□□□□□ -0.72
BRCA1-223ENST00000494123 RBMY1FQ15415 496 aaKnown RBP10.56□□□□□ -0.72
BRCA1-223ENST00000494123 SMUG1Q53HV7 270 aa10.56□□□□□ -0.72
BRCA1-223ENST00000494123 HTN1P15515 57 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 CEBPGP53567 150 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 DERL1Q9BUN8 251 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 X6R8D5 127 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 SMIM9A6NGZ8 99 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 TMEM250H0YL14 139 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 GCGP01275 180 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 LTAP01374 205 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 MIFP14174 115 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 TAS2R60P59551 318 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 RRN3P1Q2M238 152 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 BAGE2Q86Y30 109 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 NEU1Q99519 415 aa10.55□□□□□ -0.72
BRCA1-223ENST00000494123 TENM3Q9P273 2699 aa10.54□□□□□ -0.72
BRCA1-223ENST00000494123 TRAV21A0A0B4J279 112 aa10.54□□□□□ -0.72
BRCA1-223ENST00000494123 RGS13O14921 159 aa10.54□□□□□ -0.72
BRCA1-223ENST00000494123 ZNF324O75467 553 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-223ENST00000494123 COL7A1Q02388 2944 aa10.54□□□□□ -0.72
BRCA1-223ENST00000494123 PEA15Q15121 130 aa10.54□□□□□ -0.72
BRCA1-223ENST00000494123 Q6AWC8 147 aa10.54□□□□□ -0.72
BRCA1-223ENST00000494123 PYGO2Q9BRQ0 406 aa10.54□□□□□ -0.72
BRCA1-223ENST00000494123 IGHV4-28A0A0C4DH34 117 aa10.53□□□□□ -0.72
BRCA1-223ENST00000494123 ZNF705GA8MUZ8 300 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-223ENST00000494123 GNG4P50150 75 aa10.53□□□□□ -0.72
BRCA1-223ENST00000494123 ZNF674Q2M3X9 581 aa10.53□□□□□ -0.72
BRCA1-223ENST00000494123 CENPWQ5EE01 88 aa10.53□□□□□ -0.72
BRCA1-223ENST00000494123 NHLRC2Q8NBF2 726 aa10.53□□□□□ -0.72
BRCA1-223ENST00000494123 RAB19A4D1S5 217 aa10.52□□□□□ -0.73
BRCA1-223ENST00000494123 NDUFS6O75380 124 aaKnown RBP10.52□□□□□ -0.73
BRCA1-223ENST00000494123 PFN1P07737 140 aaKnown RBP10.52□□□□□ -0.73
BRCA1-223ENST00000494123 TMEM183AQ8IXX5 376 aa10.52□□□□□ -0.73
BRCA1-223ENST00000494123 ZC2HC1AQ96GY0 325 aa10.52□□□□□ -0.73
BRCA1-223ENST00000494123 NAGKQ9UJ70 344 aa10.52□□□□□ -0.73
BRCA1-223ENST00000494123 CBY3A6NI87 242 aa10.51□□□□□ -0.73
BRCA1-223ENST00000494123 DEFB4AO15263 64 aa10.51□□□□□ -0.73
BRCA1-223ENST00000494123 SRP19P09132 144 aaKnown RBP10.51□□□□□ -0.73
BRCA1-223ENST00000494123 ZNF80P51504 273 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-223ENST00000494123 MUC21Q5SSG8 566 aa10.51□□□□□ -0.73
BRCA1-223ENST00000494123 FAM159AQ6UWV7 190 aa10.51□□□□□ -0.73
BRCA1-223ENST00000494123 Q6ZQT7 251 aa10.51□□□□□ -0.73
BRCA1-223ENST00000494123 Q8NAQ8 132 aa10.51□□□□□ -0.73
BRCA1-223ENST00000494123 PARLQ9H300 379 aa10.51□□□□□ -0.73
BRCA1-223ENST00000494123 SMDT1Q9H4I9 107 aa10.51□□□□□ -0.73
BRCA1-223ENST00000494123 TGP01266 2768 aa10.51□□□□□ -0.73
BRCA1-223ENST00000494123 IGHV1OR15-1A0A075B7D0 117 aa10.51□□□□□ -0.73
BRCA1-223ENST00000494123 A0A0J9YWU9 116 aa10.51□□□□□ -0.73
BRCA1-223ENST00000494123 PRM2P04554 102 aa10.51□□□□□ -0.73
BRCA1-223ENST00000494123 EIF4E3Q8N5X7 224 aaKnown RBP10.51□□□□□ -0.73
BRCA1-223ENST00000494123 TMEM189A5PLL7 270 aa10.5□□□□□ -0.73
BRCA1-223ENST00000494123 FABP5P3A8MUU1 101 aa10.5□□□□□ -0.73
BRCA1-223ENST00000494123 EMP1P54849 157 aa10.5□□□□□ -0.73
BRCA1-223ENST00000494123 SRSF3P84103 164 aaKnown RBP10.5□□□□□ -0.73
BRCA1-223ENST00000494123 FAM162BQ5T6X4 162 aa10.5□□□□□ -0.73
BRCA1-223ENST00000494123 COX8CQ7Z4L0 72 aa10.5□□□□□ -0.73
BRCA1-223ENST00000494123 C11orf68Q9H3H3 251 aaKnown RBP10.5□□□□□ -0.73
BRCA1-223ENST00000494123 DNAH9Q9NYC9 4486 aa10.5□□□□□ -0.73
BRCA1-223ENST00000494123 MGST1P10620 155 aaKnown RBP10.49□□□□□ -0.73
BRCA1-223ENST00000494123 AZU1P20160 251 aa10.49□□□□□ -0.73
BRCA1-223ENST00000494123 PRR27Q6MZM9 219 aa10.49□□□□□ -0.73
BRCA1-223ENST00000494123 TMEM263Q8WUH6 116 aaKnown RBP10.49□□□□□ -0.73
BRCA1-223ENST00000494123 SMIM12Q96EX1 92 aa10.49□□□□□ -0.73
BRCA1-223ENST00000494123 C16orf74Q96GX8 76 aa10.49□□□□□ -0.73
BRCA1-223ENST00000494123 KCNS1Q96KK3 526 aa10.49□□□□□ -0.73
BRCA1-223ENST00000494123 LINC00467Q9BRT7 94 aa10.49□□□□□ -0.73
BRCA1-223ENST00000494123 MLST8Q9BVC4 326 aa10.49□□□□□ -0.73
BRCA1-223ENST00000494123 C9JCJ5 164 aa10.48□□□□□ -0.73
BRCA1-223ENST00000494123 ZNF493Q6ZR52 646 aa10.48□□□□□ -0.73
BRCA1-223ENST00000494123 SMIM7Q9BQ49 75 aa10.48□□□□□ -0.73
BRCA1-223ENST00000494123 SDF2L1Q9HCN8 221 aa10.48□□□□□ -0.73
BRCA1-223ENST00000494123 TRBV20OR9-2A0A075B6H5 130 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 TRGV11A0A075B6L2 103 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 PGPEP1LA6NFU8 196 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 ZNF727A8MUV8 499 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 SH2D1AO60880 128 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 ANXA2RQ3ZCQ2 193 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 RNASE8Q8TDE3 154 aaKnown RBP10.47□□□□□ -0.73
BRCA1-223ENST00000494123 BIN3Q9NQY0 253 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 STAB2Q8WWQ8 2551 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 SNURFLB1AK76 121 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 C9JQL5 133 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 ORM1P02763 201 aa10.47□□□□□ -0.73
BRCA1-223ENST00000494123 CRIP1P50238 77 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms