RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 PSG8Q9UQ74 426 aa4.61□□□□□ -1.67
CPSF7-213ENST00000494016 MOB4Q9Y3A3 225 aa4.61□□□□□ -1.67
CPSF7-213ENST00000494016 NSD1Q96L73 2696 aaPredicted RBP4.6□□□□□ -1.67
CPSF7-213ENST00000494016 ZANQ9Y493 2812 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 A0A087X0K7 114 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 TRBV7-1A0A0A6YYK4 115 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 TRAV41A0A0B4J266 112 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 IGHV3-35A0A0C4DH35 117 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 GRIFINA4D1Z8 144 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 SNURFLB1AK76 121 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 F2Z2F3 143 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 M0R3E3 92 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 BMPR1BO00238 502 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 BUB3O43684 328 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 BRI3O95415 125 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 IGHG2P01859 326 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 IGF1P05019 195 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 NPSP0C0P6 89 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 SLC25A16P16260 332 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 GPR183P32249 361 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 S100A12P80511 92 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 ATP5G2Q06055 141 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 PDE6HQ13956 83 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 JOSD1Q15040 202 aaPredicted RBP4.6□□□□□ -1.67
CPSF7-213ENST00000494016 LY6EQ16553 131 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 PSG3Q16557 428 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 KIAA1644Q3SXP7 199 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 PRR27Q6MZM9 219 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 MRPL54Q6P161 138 aaKnown RBP4.6□□□□□ -1.67
CPSF7-213ENST00000494016 RASL11AQ6T310 242 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 FAM159AQ6UWV7 190 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 TCF24Q7RTU0 167 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 S100A7AQ86SG5 101 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 Q86TA4 180 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 TMEM75Q8N9X5 138 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 CMTM2Q8TAZ6 248 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 NTN5Q8WTR8 489 aaPredicted RBP4.6□□□□□ -1.67
CPSF7-213ENST00000494016 GTSF1Q8WW33 167 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 EEF1AKMT3Q96AZ1 226 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 PACRGQ96M98 296 aaPredicted RBP4.6□□□□□ -1.67
CPSF7-213ENST00000494016 NOL4LQ96MY1 436 aaPredicted RBP4.6□□□□□ -1.67
CPSF7-213ENST00000494016 RPP21Q9H633 154 aaKnown RBP4.6□□□□□ -1.67
CPSF7-213ENST00000494016 NAT8BQ9UHF3 227 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 ZFP30Q9Y2G7 519 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 FBN1P35555 2871 aaKnown RBP4.6□□□□□ -1.67
CPSF7-213ENST00000494016 ANK3Q12955 4377 aaKnown RBP4.6□□□□□ -1.67
CPSF7-213ENST00000494016 JMJD1CQ15652 2540 aa4.6□□□□□ -1.67
CPSF7-213ENST00000494016 COL6A5A8TX70 2615 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 IGHV3OR16-8A0A075B7F1 116 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 A0A1B0GXF2 115 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 HIGD1CA8MV81 97 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 A8MWL6 223 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 H3BUX3 64 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 APCSP02743 223 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 APOHP02749 345 aaPredicted RBP4.59□□□□□ -1.67
CPSF7-213ENST00000494016 MT-ND6P03923 174 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 GZMBP10144 247 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 CRISP2P16562 243 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 RPL7P18124 248 aaKnown RBP4.59□□□□□ -1.67
CPSF7-213ENST00000494016 HLA-DMBP28068 263 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 FOXA3P55318 350 aaPredicted RBP4.59□□□□□ -1.67
CPSF7-213ENST00000494016 PROK1P58294 105 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 BLCAPP62952 87 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 RPL19P84098 196 aaKnown RBP4.59□□□□□ -1.67
CPSF7-213ENST00000494016 PSG9Q00887 426 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 COX8CQ7Z4L0 72 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 ZNF575Q86XF7 245 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 OR4C5Q8NGB2 326 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 SPATA3Q8NHX4 192 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 TMEM18Q96B42 140 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 ZC2HC1AQ96GY0 325 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 DUX5Q96PT3 197 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 PRR25Q96S07 402 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 GNB4Q9HAV0 340 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 ZNF331Q9NQX6 463 aaPredicted RBP4.59□□□□□ -1.67
CPSF7-213ENST00000494016 STAB1Q9NY15 2570 aa4.59□□□□□ -1.67
CPSF7-213ENST00000494016 TRAV26-1A0A087WT03 109 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 TRAV8-2A0A0B4J237 113 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 FAM231BA6NCW3 169 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 FAM223BA6NKX1 122 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 ZNF705FA8MVS1 300 aaPredicted RBP4.58□□□□□ -1.68
CPSF7-213ENST00000494016 A8MWP6 167 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 LINC00587B1AMM8 73 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 PRAC2D3DTV9 90 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 ZNF253O75346 499 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 P01737 135 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 HLA-DQA1P01909 254 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 TRGV3P03979 118 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 RAB4BP61018 213 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 PAFAH1B2P68402 229 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 OR10J3Q5JRS4 329 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 LCN12Q6JVE5 192 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 RNASEKQ6P5S7 137 aaKnown RBP4.58□□□□□ -1.68
CPSF7-213ENST00000494016 FAM223AQ8IWN6 122 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 OR4B1Q8NGF8 309 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 OR2D3Q8NGH3 330 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 PGLYRP4Q96LB8 373 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 VGLL1Q99990 258 aa4.58□□□□□ -1.68
CPSF7-213ENST00000494016 GFRA4Q9GZZ7 299 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms