RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 MRPS16Q9Y3D3 137 aaKnown RBP10.11□□□□□ -0.79
ATG4B-223ENST00000493618 NMBP08949 121 aa10.1□□□□□ -0.79
ATG4B-223ENST00000493618 RPL12P30050 165 aaKnown RBP10.1□□□□□ -0.79
ATG4B-223ENST00000493618 CSN1S1P47710 185 aa10.1□□□□□ -0.79
ATG4B-223ENST00000493618 SCGB1C1Q8TD33 95 aa10.1□□□□□ -0.79
ATG4B-223ENST00000493618 UPK3BQ9BT76 320 aa10.1□□□□□ -0.79
ATG4B-223ENST00000493618 WFDC1Q9HC57 220 aa10.1□□□□□ -0.79
ATG4B-223ENST00000493618 RPH3ALQ9UNE2 315 aa10.1□□□□□ -0.79
ATG4B-223ENST00000493618 LRP1BQ9NZR2 4599 aa10.1□□□□□ -0.79
ATG4B-223ENST00000493618 ABCA13Q86UQ4 5058 aa10.1□□□□□ -0.79
ATG4B-223ENST00000493618 IFNA5P01569 189 aa10.09□□□□□ -0.79
ATG4B-223ENST00000493618 DEFA1P59665 94 aa10.09□□□□□ -0.79
ATG4B-223ENST00000493618 DEFA3P59666 94 aa10.09□□□□□ -0.79
ATG4B-223ENST00000493618 KHDC3LQ587J8 217 aa10.09□□□□□ -0.79
ATG4B-223ENST00000493618 TTC32Q5I0X7 151 aa10.09□□□□□ -0.79
ATG4B-223ENST00000493618 IBA57Q5T440 356 aaKnown RBP10.09□□□□□ -0.79
ATG4B-223ENST00000493618 HYLS1Q96M11 299 aa10.09□□□□□ -0.79
ATG4B-223ENST00000493618 C18orf15Q96N68 181 aa10.09□□□□□ -0.79
ATG4B-223ENST00000493618 KRTAP4-5Q9BYR2 181 aa10.09□□□□□ -0.79
ATG4B-223ENST00000493618 DIRC3C9JPN6 131 aa10.08□□□□□ -0.8
ATG4B-223ENST00000493618 PAX4O43316 350 aa10.08□□□□□ -0.8
ATG4B-223ENST00000493618 PET100P0DJ07 73 aa10.08□□□□□ -0.8
ATG4B-223ENST00000493618 ZNF415Q09FC8 603 aa10.08□□□□□ -0.8
ATG4B-223ENST00000493618 ST6GAL2Q96JF0 529 aa10.08□□□□□ -0.8
ATG4B-223ENST00000493618 C8orf49Q96NF6 230 aa10.08□□□□□ -0.8
ATG4B-223ENST00000493618 MDFICQ9P1T7 246 aa10.08□□□□□ -0.8
ATG4B-223ENST00000493618 RBAKDNA6NC62 111 aa10.07□□□□□ -0.8
ATG4B-223ENST00000493618 ZNF266Q14584 549 aa10.07□□□□□ -0.8
ATG4B-223ENST00000493618 SPATA12Q7Z6I5 190 aa10.07□□□□□ -0.8
ATG4B-223ENST00000493618 NAGKQ9UJ70 344 aa10.07□□□□□ -0.8
ATG4B-223ENST00000493618 ICOSQ9Y6W8 199 aa10.07□□□□□ -0.8
ATG4B-223ENST00000493618 APOBP04114 4563 aaKnown RBP10.06□□□□□ -0.8
ATG4B-223ENST00000493618 DNAH5Q8TE73 4624 aa10.06□□□□□ -0.8
ATG4B-223ENST00000493618 PGPA6NDG6 321 aa10.06□□□□□ -0.8
ATG4B-223ENST00000493618 HMGB3O15347 200 aaKnown RBP10.06□□□□□ -0.8
ATG4B-223ENST00000493618 TAS2R45P59539 299 aa10.06□□□□□ -0.8
ATG4B-223ENST00000493618 RAB2AP61019 212 aa10.06□□□□□ -0.8
ATG4B-223ENST00000493618 FHL2Q14192 279 aa10.06□□□□□ -0.8
ATG4B-223ENST00000493618 TMEM183BQ1AE95 376 aa10.06□□□□□ -0.8
ATG4B-223ENST00000493618 TMEM183AQ8IXX5 376 aa10.06□□□□□ -0.8
ATG4B-223ENST00000493618 LYPD1Q8N2G4 141 aa10.06□□□□□ -0.8
ATG4B-223ENST00000493618 TRBV7-9A0A0J9YWB2 115 aa10.05□□□□□ -0.8
ATG4B-223ENST00000493618 SFTA3P0C7M3 94 aa10.05□□□□□ -0.8
ATG4B-223ENST00000493618 CRYBA4P53673 196 aa10.05□□□□□ -0.8
ATG4B-223ENST00000493618 OTORQ9NRC9 128 aa10.05□□□□□ -0.8
ATG4B-223ENST00000493618 PRO0255Q9UI72 69 aa10.05□□□□□ -0.8
ATG4B-223ENST00000493618 HHLA3Q9XRX5 114 aa10.05□□□□□ -0.8
ATG4B-223ENST00000493618 ALG5Q9Y673 324 aa10.05□□□□□ -0.8
ATG4B-223ENST00000493618 TRGV4A0A0C4DH28 118 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 A0A1W2PPQ1 181 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 F6UZH7 168 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 SIVA1O15304 175 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 NXPH4O95158 308 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 LINC00315P59091 139 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 KRTAP10-2P60368 255 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 GNG5P63218 68 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 ACOT6Q3I5F7 207 aaPredicted RBP10.04□□□□□ -0.8
ATG4B-223ENST00000493618 Q6AWC8 147 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 FAM159AQ6UWV7 190 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 GOLT1AQ6ZVE7 132 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 CMTM2Q8TAZ6 248 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 ZNF479Q96JC4 524 aa10.04□□□□□ -0.8
ATG4B-223ENST00000493618 A0A1W2PPV4 95 aa10.03□□□□□ -0.8
ATG4B-223ENST00000493618 GNRH2O43555 120 aa10.03□□□□□ -0.8
ATG4B-223ENST00000493618 TRGV11A0A075B6L2 103 aa10.02□□□□□ -0.81
ATG4B-223ENST00000493618 TRAV8-1A0A0A6YYK1 113 aa10.02□□□□□ -0.81
ATG4B-223ENST00000493618 LYPD5Q6UWN5 251 aa10.02□□□□□ -0.81
ATG4B-223ENST00000493618 OR10G4Q8NGN3 311 aa10.02□□□□□ -0.81
ATG4B-223ENST00000493618 OR10G9Q8NGN4 311 aa10.02□□□□□ -0.81
ATG4B-223ENST00000493618 OR10G7Q8NGN6 311 aa10.02□□□□□ -0.81
ATG4B-223ENST00000493618 TVP23CQ96ET8 276 aa10.02□□□□□ -0.81
ATG4B-223ENST00000493618 SGK494Q96LW2 274 aa10.02□□□□□ -0.81
ATG4B-223ENST00000493618 LENEPQ9Y5L5 61 aa10.02□□□□□ -0.81
ATG4B-223ENST00000493618 TNFRSF18Q9Y5U5 241 aa10.02□□□□□ -0.81
ATG4B-223ENST00000493618 CDK2AP2O75956 126 aa10.01□□□□□ -0.81
ATG4B-223ENST00000493618 FUSP35637 526 aaKnown RBP eCLIP10.01□□□□□ -0.81
ATG4B-223ENST00000493618 SLAQ13239 276 aa10.01□□□□□ -0.81
ATG4B-223ENST00000493618 MRPL23Q16540 153 aaKnown RBP10.01□□□□□ -0.81
ATG4B-223ENST00000493618 FAM74A1Q5RGS3 127 aa10.01□□□□□ -0.81
ATG4B-223ENST00000493618 PQLC2Q6ZP29 291 aa10.01□□□□□ -0.81
ATG4B-223ENST00000493618 MAPKAPK5-AS1Q8N8E1 139 aa10.01□□□□□ -0.81
ATG4B-223ENST00000493618 HSD17B11Q8NBQ5 300 aa10.01□□□□□ -0.81
ATG4B-223ENST00000493618 SPXQ9BT56 116 aa10.01□□□□□ -0.81
ATG4B-223ENST00000493618 K7EQD1 137 aa10□□□□□ -0.81
ATG4B-223ENST00000493618 ARL14EPLP0DKL9 152 aa10□□□□□ -0.81
ATG4B-223ENST00000493618 Q6ZRN7 208 aaPredicted RBP10□□□□□ -0.81
ATG4B-223ENST00000493618 TMED6Q8WW62 240 aa10□□□□□ -0.81
ATG4B-223ENST00000493618 TREM1Q9NP99 234 aa10□□□□□ -0.81
ATG4B-223ENST00000493618 IGHV3-16A0A0C4DH30 117 aa9.99□□□□□ -0.81
ATG4B-223ENST00000493618 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
ATG4B-223ENST00000493618 TYMSP04818 313 aa9.99□□□□□ -0.81
ATG4B-223ENST00000493618 GYPEP15421 78 aa9.99□□□□□ -0.81
ATG4B-223ENST00000493618 BTF3P20290 206 aaKnown RBP9.99□□□□□ -0.81
ATG4B-223ENST00000493618 SRIP30626 198 aa9.99□□□□□ -0.81
ATG4B-223ENST00000493618 CDC34P49427 236 aaPredicted RBP9.99□□□□□ -0.81
ATG4B-223ENST00000493618 NEGR1Q7Z3B1 354 aa9.99□□□□□ -0.81
ATG4B-223ENST00000493618 PCNPQ8WW12 178 aaKnown RBP9.99□□□□□ -0.81
ATG4B-223ENST00000493618 RASL10AQ92737 203 aa9.99□□□□□ -0.81
ATG4B-223ENST00000493618 TRAV4A0A0B4J268 109 aa9.98□□□□□ -0.81
ATG4B-223ENST00000493618 TRAV21A0A0B4J279 112 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms