RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 DTX2Q86UW9 622 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 TMEM86BQ8N661 226 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 TRBV7-7A0A0K0K1E9 115 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 A0A0U1RRA0 63 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 CRYGDP07320 174 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 Q5XG85 94 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 LINC00305Q7Z4B0 112 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 FOXA2Q9Y261 457 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-205ENST00000493587 C19orf71A6NCJ1 209 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 DLL1O00548 723 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 P0C879 139 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 UBE2D1P51668 147 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 KLHL30-AS1Q8NEE0 82 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 EEF1AKMT3Q96AZ1 226 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 PLEKHB2Q96CS7 222 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 NACAE9PAV3 2078 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 TRBV10-2A0A0K0K1G8 114 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 TCRAP04437 139 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 COX6CP09669 75 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 ZNF672Q499Z4 452 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-205ENST00000493587 C1orf159Q96HA4 380 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 PRDM14Q9GZV8 571 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 Q9H3A6 140 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 C7orf69Q9H7B7 122 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 ATP5G1P05496 136 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 CRYGAP11844 174 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 CCL4P13236 92 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 SYNJ2BPP57105 145 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 PLGLB1Q02325 96 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 CIRBPQ14011 172 aaKnown RBP5.37□□□□□ -1.55
VPS13B-205ENST00000493587 SPANXDQ9BXN6 97 aa5.37□□□□□ -1.55
VPS13B-205ENST00000493587 POLEQ07864 2286 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 TMEM30CPA0ZSE6 113 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 C12orf77C9JDV5 145 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 SCRG1O75711 98 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 IGHV3-9P01782 118 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 ZNF883P0CG24 379 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 CFC1BP0CG36 223 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 CFC1P0CG37 223 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 PCOLCEQ15113 449 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 RPS19BP1Q86WX3 136 aaKnown RBP5.36□□□□□ -1.55
VPS13B-205ENST00000493587 FAM167A-AS1Q96KT0 104 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 C2orf48Q96LS8 159 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 IMMP1LQ96LU5 166 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 IMUPQ9GZP8 106 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 IGKV1OR2-108A0A075B7D4 117 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 B3GALT5-AS1P59052 145 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 NPC2P61916 151 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 Q86TA4 180 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 ZMAT4Q9H898 229 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 TRBV6-6A0A0A6YYG2 114 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 PRSS46E5RG02 174 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 OXTP01178 125 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 CRYGSP22914 178 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 NBL1P41271 181 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 FAM27BQ5VT28 67 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 WDR31Q8NA23 367 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 C16orf92Q96LL3 132 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 TPSG1Q9NRR2 321 aa5.36□□□□□ -1.55
VPS13B-205ENST00000493587 MED13Q9UHV7 2174 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 TRAV8-3A0A0A6YYJ7 113 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 TRAV12-3A0A0B4J271 114 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 CD59P13987 128 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 BRWD1-AS2P59051 145 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 LINC00596Q86U02 117 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 PRR7Q8TB68 274 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 MLST8Q9BVC4 326 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 PEMTQ9UBM1 199 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 SSUH2Q9Y2M2 353 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 GPR179Q6PRD1 2367 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 IGHV1-45A0A0A0MS14 117 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 SRRM4A7MD48 611 aaKnown RBP5.35□□□□□ -1.55
VPS13B-205ENST00000493587 ZNF785A8K8V0 405 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 F8VRH5 84 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 FKBP2P26885 142 aaKnown RBP5.35□□□□□ -1.55
VPS13B-205ENST00000493587 DUTP33316 252 aaKnown RBP5.35□□□□□ -1.55
VPS13B-205ENST00000493587 DLX1P56177 255 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 LINC01559Q495D7 138 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 Q6ZT83 130 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 C11orf53Q8IXP5 236 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 POM121L12Q8N7R1 296 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 FXYD5Q96DB9 178 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 SCGB3A1Q96QR1 104 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 TET2Q6N021 2002 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-205ENST00000493587 PCNX2A6NKB5 2137 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 AHCTF1Q8WYP5 2266 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 Q0VFX4 171 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 FOXF2Q12947 444 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 LINC00643Q86TS7 51 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 NUP37Q8NFH4 326 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 C9orf85Q96MD7 179 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 METTL26Q96S19 204 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 AGPAT4-IT1Q9H0P7 198 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 PRORYQ9H606 182 aa5.35□□□□□ -1.55
VPS13B-205ENST00000493587 ZNF292O60281 2723 aa5.34□□□□□ -1.55
VPS13B-205ENST00000493587 WNT9BO14905 357 aa5.34□□□□□ -1.55
VPS13B-205ENST00000493587 SS18L1O75177 396 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-205ENST00000493587 GATA1P15976 413 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-205ENST00000493587 CD40P25942 277 aa5.34□□□□□ -1.55
VPS13B-205ENST00000493587 LPAL2Q16609 132 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms