RNA–Protein interactions for RNA: ENST00000492723.1

TOM1-216, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-216ENST00000492723 DDTP30046 118 aa12.72□□□□□ -0.37
TOM1-216ENST00000492723 SRSF2Q01130 221 aaKnown RBP12.72□□□□□ -0.37
TOM1-216ENST00000492723 ZNF575Q86XF7 245 aa12.72□□□□□ -0.37
TOM1-216ENST00000492723 GATD1Q8NB37 220 aa12.72□□□□□ -0.37
TOM1-216ENST00000492723 SMPXQ9UHP9 88 aa12.72□□□□□ -0.37
TOM1-216ENST00000492723 J3QKU1 62 aa12.71□□□□□ -0.37
TOM1-216ENST00000492723 CCDC168Q8NDH2 2452 aa12.71□□□□□ -0.38
TOM1-216ENST00000492723 IGLC6P0CF74 106 aa12.71□□□□□ -0.38
TOM1-216ENST00000492723 CTRLP40313 264 aa12.71□□□□□ -0.38
TOM1-216ENST00000492723 URB1-AS1Q96HZ7 61 aa12.71□□□□□ -0.38
TOM1-216ENST00000492723 K7EMT4 169 aa12.7□□□□□ -0.38
TOM1-216ENST00000492723 M0R2Z0 102 aa12.7□□□□□ -0.38
TOM1-216ENST00000492723 LINC01559Q495D7 138 aa12.7□□□□□ -0.38
TOM1-216ENST00000492723 REC114Q7Z4M0 266 aa12.7□□□□□ -0.38
TOM1-216ENST00000492723 SRD5A1P18405 259 aa12.7□□□□□ -0.38
TOM1-216ENST00000492723 TWIST1Q15672 202 aa12.7□□□□□ -0.38
TOM1-216ENST00000492723 ZNF493Q6ZR52 646 aa12.7□□□□□ -0.38
TOM1-216ENST00000492723 DEFB1P60022 68 aa12.69□□□□□ -0.38
TOM1-216ENST00000492723 HIST1H1AQ02539 215 aaPredicted RBP12.69□□□□□ -0.38
TOM1-216ENST00000492723 FOXE3Q13461 319 aa12.69□□□□□ -0.38
TOM1-216ENST00000492723 OR10J6PQ8NGY7 276 aa12.69□□□□□ -0.38
TOM1-216ENST00000492723 PSMG3-AS1Q96PY0 264 aa12.69□□□□□ -0.38
TOM1-216ENST00000492723 C11orf21Q9P2W6 132 aa12.69□□□□□ -0.38
TOM1-216ENST00000492723 UFC1Q9Y3C8 167 aa12.69□□□□□ -0.38
TOM1-216ENST00000492723 OVOL1O14753 267 aa12.68□□□□□ -0.38
TOM1-216ENST00000492723 PPP1R14DQ9NXH3 145 aa12.68□□□□□ -0.38
TOM1-216ENST00000492723 HELZ2Q9BYK8 2649 aaKnown RBP12.68□□□□□ -0.38
TOM1-216ENST00000492723 IGKV3D-20A0A0C4DH25 116 aa12.68□□□□□ -0.38
TOM1-216ENST00000492723 FAM181BA6NEQ2 426 aa12.68□□□□□ -0.38
TOM1-216ENST00000492723 ELANEP08246 267 aa12.68□□□□□ -0.38
TOM1-216ENST00000492723 J3KRW8 73 aa12.67□□□□□ -0.38
TOM1-216ENST00000492723 CSN3P07498 182 aa12.67□□□□□ -0.38
TOM1-216ENST00000492723 C3orf79P0CE67 100 aa12.67□□□□□ -0.38
TOM1-216ENST00000492723 PMCHL1Q16048 86 aa12.67□□□□□ -0.38
TOM1-216ENST00000492723 AMN1Q8IY45 258 aa12.67□□□□□ -0.38
TOM1-216ENST00000492723 LINC00477Q96M19 166 aa12.67□□□□□ -0.38
TOM1-216ENST00000492723 LINC00614P0C842 121 aa12.67□□□□□ -0.38
TOM1-216ENST00000492723 Q6ZQT7 251 aa12.67□□□□□ -0.38
TOM1-216ENST00000492723 CHCHD1Q96BP2 118 aaKnown RBP12.67□□□□□ -0.38
TOM1-216ENST00000492723 F6UB75 175 aa12.66□□□□□ -0.38
TOM1-216ENST00000492723 LGALS1P09382 135 aaKnown RBP12.66□□□□□ -0.38
TOM1-216ENST00000492723 FAM104BQ5XKR9 115 aa12.66□□□□□ -0.38
TOM1-216ENST00000492723 LENEPQ9Y5L5 61 aa12.66□□□□□ -0.38
TOM1-216ENST00000492723 FLNAP21333 2647 aaKnown RBP12.66□□□□□ -0.38
TOM1-216ENST00000492723 TDRG1Q3Y452 100 aa12.66□□□□□ -0.38
TOM1-216ENST00000492723 PRR9Q5T870 116 aa12.66□□□□□ -0.38
TOM1-216ENST00000492723 MSRB1Q9NZV6 116 aa12.66□□□□□ -0.38
TOM1-216ENST00000492723 D6R8Y8 96 aa12.65□□□□□ -0.38
TOM1-216ENST00000492723 TEX43Q6ZNM6 134 aa12.65□□□□□ -0.38
TOM1-216ENST00000492723 WFDC3Q8IUB2 231 aa12.65□□□□□ -0.38
TOM1-216ENST00000492723 Q8N976 141 aa12.65□□□□□ -0.38
TOM1-216ENST00000492723 MYOZ3Q8TDC0 251 aa12.65□□□□□ -0.38
TOM1-216ENST00000492723 MYO9AB2RTY4 2548 aa12.65□□□□□ -0.38
TOM1-216ENST00000492723 SYNJ2BPP57105 145 aa12.65□□□□□ -0.39
TOM1-216ENST00000492723 UBE2E2Q96LR5 201 aa12.65□□□□□ -0.39
TOM1-216ENST00000492723 SONP18583 2426 aaKnown RBP12.64□□□□□ -0.39
TOM1-216ENST00000492723 IGHV4OR15-8A0A075B7B6 117 aa12.64□□□□□ -0.39
TOM1-216ENST00000492723 A0A087WW49 117 aa12.64□□□□□ -0.39
TOM1-216ENST00000492723 IGHV1-24A0A0C4DH33 117 aa12.64□□□□□ -0.39
TOM1-216ENST00000492723 OR8A1Q8NGG7 326 aa12.64□□□□□ -0.39
TOM1-216ENST00000492723 CNFNQ9BYD5 112 aa12.64□□□□□ -0.39
TOM1-216ENST00000492723 BTF3P20290 206 aaKnown RBP12.64□□□□□ -0.39
TOM1-216ENST00000492723 ZNF124Q15973 351 aa12.64□□□□□ -0.39
TOM1-216ENST00000492723 MRPL51Q4U2R6 128 aaKnown RBP12.63□□□□□ -0.39
TOM1-216ENST00000492723 EBLN2Q6P2I7 272 aa12.63□□□□□ -0.39
TOM1-216ENST00000492723 ZFAND2AQ8N6M9 145 aa12.63□□□□□ -0.39
TOM1-216ENST00000492723 ID1P41134 155 aa12.63□□□□□ -0.39
TOM1-216ENST00000492723 ORMDL3Q8N138 153 aa12.63□□□□□ -0.39
TOM1-216ENST00000492723 Q8N2B8 174 aa12.63□□□□□ -0.39
TOM1-216ENST00000492723 RNF152Q8N8N0 203 aa12.63□□□□□ -0.39
TOM1-216ENST00000492723 HOXD3P31249 432 aaPredicted RBP12.62□□□□□ -0.39
TOM1-216ENST00000492723 TFPI2P48307 235 aa12.62□□□□□ -0.39
TOM1-216ENST00000492723 DCANP1Q8TF63 244 aa12.62□□□□□ -0.39
TOM1-216ENST00000492723 PRELID3AQ96N28 172 aa12.62□□□□□ -0.39
TOM1-216ENST00000492723 VAMP8Q9BV40 100 aa12.62□□□□□ -0.39
TOM1-216ENST00000492723 TMEM191AQ9H0A3 160 aa12.62□□□□□ -0.39
TOM1-216ENST00000492723 PAM16Q9Y3D7 125 aa12.62□□□□□ -0.39
TOM1-216ENST00000492723 U3KQK5 164 aa12.62□□□□□ -0.39
TOM1-216ENST00000492723 PDZD2O15018 2839 aa12.62□□□□□ -0.39
TOM1-216ENST00000492723 LBHQ53QV2 105 aaPredicted RBP12.62□□□□□ -0.39
TOM1-216ENST00000492723 PRSS3P2Q8NHM4 247 aa12.62□□□□□ -0.39
TOM1-216ENST00000492723 KIR2DL5BA0A0G2JN68 375 aa12.61□□□□□ -0.39
TOM1-216ENST00000492723 KIR2DL5BA0A0G2JPC4 375 aa12.61□□□□□ -0.39
TOM1-216ENST00000492723 KIR2DL5AQ8N109 375 aa12.61□□□□□ -0.39
TOM1-216ENST00000492723 KLHDC1Q8N7A1 406 aa12.61□□□□□ -0.39
TOM1-216ENST00000492723 NDUFAF3Q9BU61 184 aa12.61□□□□□ -0.39
TOM1-216ENST00000492723 MS4A6AQ9H2W1 248 aa12.61□□□□□ -0.39
TOM1-216ENST00000492723 ITPR2Q14571 2701 aa12.61□□□□□ -0.39
TOM1-216ENST00000492723 LOC389332A0A1B0GUA5 103 aa12.61□□□□□ -0.39
TOM1-216ENST00000492723 SMKR1H3BMG3 65 aa12.61□□□□□ -0.39
TOM1-216ENST00000492723 CKS2P33552 79 aa12.61□□□□□ -0.39
TOM1-216ENST00000492723 TEX29Q8N6K0 151 aa12.61□□□□□ -0.39
TOM1-216ENST00000492723 C2orf70A6NJV1 201 aa12.6□□□□□ -0.39
TOM1-216ENST00000492723 SAMD13Q5VXD3 122 aa12.6□□□□□ -0.39
TOM1-216ENST00000492723 FA2HQ7L5A8 372 aa12.6□□□□□ -0.39
TOM1-216ENST00000492723 OR10AG1Q8NH19 301 aa12.6□□□□□ -0.39
TOM1-216ENST00000492723 AP5S1Q9NUS5 200 aa12.6□□□□□ -0.39
TOM1-216ENST00000492723 TRAV21A0A0B4J279 112 aa12.6□□□□□ -0.39
TOM1-216ENST00000492723 LGALS9O00182 355 aa12.6□□□□□ -0.39
TOM1-216ENST00000492723 LEPROTL1O95214 131 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms