RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SYS1-DBNDD2H3BUS1 97 aa9.93□□□□□ -0.82
HDAC3-213ENST00000492506 IGKV1-5P01602 117 aa9.93□□□□□ -0.82
HDAC3-213ENST00000492506 CATR1Q13166 79 aa9.93□□□□□ -0.82
HDAC3-213ENST00000492506 EBLN2Q6P2I7 272 aa9.93□□□□□ -0.82
HDAC3-213ENST00000492506 OR4A16Q8NH70 328 aa9.93□□□□□ -0.82
HDAC3-213ENST00000492506 DERL1Q9BUN8 251 aa9.93□□□□□ -0.82
HDAC3-213ENST00000492506 FBXL15Q9H469 300 aa9.93□□□□□ -0.82
HDAC3-213ENST00000492506 RAB9BQ9NP90 201 aa9.93□□□□□ -0.82
HDAC3-213ENST00000492506 CLEC5AQ9NY25 188 aa9.93□□□□□ -0.82
HDAC3-213ENST00000492506 RRHO14718 337 aa9.92□□□□□ -0.82
HDAC3-213ENST00000492506 NXPH3O95157 252 aa9.92□□□□□ -0.82
HDAC3-213ENST00000492506 SAA2P0DJI9 122 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-213ENST00000492506 GCHFRP30047 84 aa9.92□□□□□ -0.82
HDAC3-213ENST00000492506 TNXAQ16473 311 aa9.92□□□□□ -0.82
HDAC3-213ENST00000492506 PPP1R27Q86WC6 154 aa9.92□□□□□ -0.82
HDAC3-213ENST00000492506 OR2D2Q9H210 308 aa9.92□□□□□ -0.82
HDAC3-213ENST00000492506 VCX2Q9H322 139 aa9.92□□□□□ -0.82
HDAC3-213ENST00000492506 MBNL3Q9NUK0 354 aaKnown RBP9.92□□□□□ -0.82
HDAC3-213ENST00000492506 ZNF257Q9Y2Q1 563 aa9.92□□□□□ -0.82
HDAC3-213ENST00000492506 RBMY1BA6NDE4 496 aaKnown RBP9.91□□□□□ -0.82
HDAC3-213ENST00000492506 RBMY1EA6NEQ0 496 aaKnown RBP9.91□□□□□ -0.82
HDAC3-213ENST00000492506 FNDC10F2Z333 226 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 K7EN84 100 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 SLC17A3O00476 420 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 TNFSF12O43508 249 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 RBMY1DP0C7P1 496 aaKnown RBP9.91□□□□□ -0.82
HDAC3-213ENST00000492506 ARL14EPLP0DKL9 152 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 LCN12Q6JVE5 192 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 TRAT1Q6PIZ9 186 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 Q6ZRM9 215 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 SPATA12Q7Z6I5 190 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 GTSCR1Q86UQ5 136 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 ATOH7Q8N100 152 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 NHLRC2Q8NBF2 726 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 TMEM190Q8WZ59 177 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 NPVFQ9HCQ7 196 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 JPT1Q9UK76 154 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 KIAA1109Q2LD37 5005 aa9.91□□□□□ -0.82
HDAC3-213ENST00000492506 A0A0G2JLM5 398 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 A0A1W2PPM0 123 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 GAGE12HA6NDE8 117 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 HELTA6NFD8 242 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 LEPROTL1O95214 131 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 IGKV1-39P01597 117 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 TRGV3P03979 118 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 IGKV1D-39P04432 117 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 CSN3P07498 182 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 SCTP09683 121 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 P0C879 139 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 RNASEKQ6P5S7 137 aaKnown RBP9.9□□□□□ -0.82
HDAC3-213ENST00000492506 ERASQ7Z444 233 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 IFI27L2Q9H2X8 130 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 SPCS1Q9Y6A9 102 aa9.9□□□□□ -0.82
HDAC3-213ENST00000492506 F8W1H4 67 aa9.89□□□□□ -0.83
HDAC3-213ENST00000492506 BRI3O95415 125 aa9.89□□□□□ -0.83
HDAC3-213ENST00000492506 SYNJ2BPP57105 145 aa9.89□□□□□ -0.83
HDAC3-213ENST00000492506 CENPWQ5EE01 88 aa9.89□□□□□ -0.83
HDAC3-213ENST00000492506 IBA57Q5T440 356 aaKnown RBP9.89□□□□□ -0.83
HDAC3-213ENST00000492506 ZNF562Q6V9R5 426 aa9.89□□□□□ -0.83
HDAC3-213ENST00000492506 FAM19A2Q8N3H0 131 aa9.89□□□□□ -0.83
HDAC3-213ENST00000492506 PLEKHA3Q9HB20 300 aa9.89□□□□□ -0.83
HDAC3-213ENST00000492506 MRPL16Q9NX20 251 aaKnown RBP9.89□□□□□ -0.83
HDAC3-213ENST00000492506 RABAC1Q9UI14 185 aa9.89□□□□□ -0.83
HDAC3-213ENST00000492506 LOC102724200A0A096LPH7 203 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-213ENST00000492506 K7EQM0 130 aa9.88□□□□□ -0.83
HDAC3-213ENST00000492506 LY6G6CO95867 125 aa9.88□□□□□ -0.83
HDAC3-213ENST00000492506 APOA2P02652 100 aa9.88□□□□□ -0.83
HDAC3-213ENST00000492506 CRYGCP07315 174 aa9.88□□□□□ -0.83
HDAC3-213ENST00000492506 CRYBA4P53673 196 aa9.88□□□□□ -0.83
HDAC3-213ENST00000492506 TAS2R45P59539 299 aa9.88□□□□□ -0.83
HDAC3-213ENST00000492506 SSBP2P81877 361 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-213ENST00000492506 LINC01545Q5VT33 79 aa9.88□□□□□ -0.83
HDAC3-213ENST00000492506 BLNKQ8WV28 456 aa9.88□□□□□ -0.83
HDAC3-213ENST00000492506 PGPEP1LA6NFU8 196 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 SLC25A17O43808 307 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 TRBV12-3P01733 135 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 TCL1AP56279 114 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 PLGLAQ15195 96 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 PSG5Q15238 335 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 ZNF585BQ52M93 769 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 RPL39P5Q59GN2 51 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 CT83Q5H943 113 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 PQLC2Q6ZP29 291 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 STXBP6Q8NFX7 210 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 OR5AN1Q8NGI8 311 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 OR52E5Q8NH55 327 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 ADTRPQ96IZ2 230 aa9.87□□□□□ -0.83
HDAC3-213ENST00000492506 YTHDF2Q9Y5A9 579 aaKnown RBP9.87□□□□□ -0.83
HDAC3-213ENST00000492506 VPS13DQ5THJ4 4388 aa9.86□□□□□ -0.83
HDAC3-213ENST00000492506 IGKV1-6A0A0C4DH72 117 aa9.86□□□□□ -0.83
HDAC3-213ENST00000492506 A0A1W2PRE2 83 aa9.86□□□□□ -0.83
HDAC3-213ENST00000492506 ZNF785A8K8V0 405 aa9.86□□□□□ -0.83
HDAC3-213ENST00000492506 H3BUA1 57 aa9.86□□□□□ -0.83
HDAC3-213ENST00000492506 TSPAN13O95857 204 aa9.86□□□□□ -0.83
HDAC3-213ENST00000492506 CT45A10P0DMU9 189 aa9.86□□□□□ -0.83
HDAC3-213ENST00000492506 SMAGPQ0VAQ4 97 aa9.86□□□□□ -0.83
HDAC3-213ENST00000492506 KIAA1644Q3SXP7 199 aa9.86□□□□□ -0.83
HDAC3-213ENST00000492506 ZNF479Q96JC4 524 aa9.86□□□□□ -0.83
HDAC3-213ENST00000492506 RNF5Q99942 180 aa9.86□□□□□ -0.83
HDAC3-213ENST00000492506 WFDC10AQ9H1F0 79 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms