RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 RPH3ALQ9UNE2 315 aa4.51□□□□□ -1.69
VPS41-214ENST00000490924 HELZ2Q9BYK8 2649 aaKnown RBP4.51□□□□□ -1.69
VPS41-214ENST00000490924 IGHV3-72A0A0B4J1Y9 119 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.5□□□□□ -1.69
VPS41-214ENST00000490924 M0QZ24 198 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 SNAI2O43623 268 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 CTSGP08311 255 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 FAM106CPP0CH98 169 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 PLNP26678 52 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 ODF1Q14990 250 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 TWIST1Q15672 202 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 ASPHD1Q5U4P2 390 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 C9orf47Q6ZRZ4 202 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 NEGR1Q7Z3B1 354 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 ERASQ7Z444 233 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 DTX2Q86UW9 622 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 AMN1Q8IY45 258 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 Q8N8P6 123 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 OR2K2Q8NGT1 345 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 ZNF502Q8TBZ5 544 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 MRAP2Q96G30 205 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 AKAP13Q12802 2813 aa4.5□□□□□ -1.69
VPS41-214ENST00000490924 ANKHD1Q8IWZ3 2542 aaKnown RBP4.49□□□□□ -1.69
VPS41-214ENST00000490924 IGSF10Q6WRI0 2623 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 RP1L1Q8IWN7 2480 aaPredicted RBP4.49□□□□□ -1.69
VPS41-214ENST00000490924 KALRNO60229 2985 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 MALRD1Q5VYJ5 2156 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 IGLV2-18A0A075B6J9 118 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 TRBV7-1A0A0A6YYK4 115 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 A0A0G2JLM5 398 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 A0A1W2PPM0 123 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 OR2T8A6NH00 312 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 M0R381 172 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 M0R3E3 92 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 KLK10O43240 276 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 BUB3O43684 328 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 NDUFS7O75251 213 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 DPM2O94777 84 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 IGHG4P01861 327 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 EGR2P11161 476 aaPredicted RBP4.49□□□□□ -1.69
VPS41-214ENST00000490924 SCGB1A1P11684 91 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 FABP2P12104 132 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 UCNP55089 124 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 LDLRAD2Q5SZI1 272 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 AMMECR1LQ6DCA0 310 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 C11orf71Q6IPW1 123 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 RNF185Q96GF1 192 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 SGK494Q96LW2 274 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 C20orf78Q9BR46 151 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 ZNF580Q9UK33 172 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 HHLA3Q9XRX5 114 aa4.49□□□□□ -1.69
VPS41-214ENST00000490924 TRAV8-6A0A0B4J262 113 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 A0A1B0GWB2 263 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 TMEM213A2RRL7 107 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 H3BUA1 57 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 J3QR89 54 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 K7ENP7 123 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 GOSR1O95249 250 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 TNFRSF6BO95407 300 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 NPYP01303 97 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 IGKCP01834 107 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 CLEC3BP05452 202 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 CSN3P07498 182 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 COX7A1P24310 79 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 UBE2E1P51965 193 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 ZNF138P52744 262 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 ORMDL2Q53FV1 153 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 C9orf139Q6ZV77 190 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 VMO1Q7Z5L0 202 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 OR8A1Q8NGG7 326 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 C17orf77Q96MU5 243 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 CSTL1Q9H114 145 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 ONECUT1Q9UBC0 465 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 NAV2Q8IVL1 2488 aa4.48□□□□□ -1.69
VPS41-214ENST00000490924 ARFGEF3Q5TH69 2177 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 IGHV3-21A0A0B4J1V1 117 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 IGHV7-81A0A0B4J1V7 117 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 A0A1W2PRD5 423 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 A0A1W2PRF3 423 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 A0A1W2PRM7 423 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 FAM223BA6NKX1 122 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 F8W1H4 67 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 G3V4G9 280 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 H3BTX0 84 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 NCR2O95944 276 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 PRB1P04280 392 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 SMIM13P0DJ93 91 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 LAGE3Q14657 143 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 PAPPA-AS1Q5QFB9 102 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 TMEM78Q5T7P6 136 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 APRG1Q8IVJ8 170 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 FAM223AQ8IWN6 122 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 POM121L12Q8N7R1 296 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 MYOZ3Q8TDC0 251 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 EEF1AKMT3Q96AZ1 226 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 LINC00477Q96M19 166 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 METTL26Q96S19 204 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 SMAD5-AS1Q9Y6J3 95 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 POLEQ07864 2286 aa4.47□□□□□ -1.69
VPS41-214ENST00000490924 SVILO95425 2214 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms