RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 PRR25Q96S07 402 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 TRAV8-6A0A0B4J262 113 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 A0A1B0GW64 132 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 GAGE12BA1L429 117 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 GAGE7O76087 117 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 PFN1P07737 140 aaKnown RBP11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 GAGE12FP0CL80 117 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 GAGE12GP0CL81 117 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 GAGE12IP0CL82 117 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 ATP5L2Q7Z4Y8 100 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 DYNAPQ8N1N2 210 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 LY96Q9Y6Y9 160 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 C5orf52A6NGY3 159 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 MALP21145 153 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 CFAP54Q96N23 3096 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 ADARB2-AS1A8MUL3 147 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 HLA-DMBP28068 263 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 ORMDL2Q53FV1 153 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 E7EUB6 86 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 H3BRM9 83 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 IGLV2-23P01705 113 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 LURAP1LQ8IV03 231 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 LINC00574Q9H8X3 128 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 ODF3BA8MYP8 253 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 MYCNOSP40205 109 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 C17orf77Q96MU5 243 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 MS4A6AQ9H2W1 248 aa11.22□□□□□ -0.61
ARHGEF39-205ENST00000490638 MRAP2Q96G30 205 aa11.21□□□□□ -0.61
ARHGEF39-205ENST00000490638 TEX22C9J3V5 150 aa11.21□□□□□ -0.61
ARHGEF39-205ENST00000490638 LYRM7Q5U5X0 104 aa11.21□□□□□ -0.61
ARHGEF39-205ENST00000490638 CFAP161Q6P656 301 aa11.21□□□□□ -0.61
ARHGEF39-205ENST00000490638 COLCA2A8K830 154 aa11.21□□□□□ -0.62
ARHGEF39-205ENST00000490638 CRYGCP07315 174 aa11.21□□□□□ -0.62
ARHGEF39-205ENST00000490638 CD28P10747 220 aa11.21□□□□□ -0.62
ARHGEF39-205ENST00000490638 NUP35Q8NFH5 326 aa11.21□□□□□ -0.62
ARHGEF39-205ENST00000490638 LINC00614P0C842 121 aa11.21□□□□□ -0.62
ARHGEF39-205ENST00000490638 FAM90A2PQ658T7 463 aa11.21□□□□□ -0.62
ARHGEF39-205ENST00000490638 PHLDA1Q8WV24 401 aaPredicted RBP11.21□□□□□ -0.62
ARHGEF39-205ENST00000490638 D6R8Y8 96 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 UBE2CO00762 179 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 Q6YL49 198 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 APRG1Q8IVJ8 170 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 ZNF114Q8NC26 417 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 GNB1LQ9BYB4 327 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 FRYLO94915 3013 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 LINC01548A6NM66 108 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 TMEM75Q8N9X5 138 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 FXYD5Q96DB9 178 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 H7C2G1 150 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 RHODO00212 210 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 NDUFS6O75380 124 aaKnown RBP11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 ZNF726P1Q15940 193 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 C8orf49Q96NF6 230 aa11.2□□□□□ -0.62
ARHGEF39-205ENST00000490638 IGHV3-16A0A0C4DH30 117 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 SERF1AO75920 110 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 LSM4Q9Y4Z0 139 aaKnown RBP11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 A0A1W2PPR1 153 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 HBDP02042 147 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 ANXA2RQ3ZCQ2 193 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 FOXI2Q6ZQN5 318 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 ADMP35318 185 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 TANC2Q9HCD6 1990 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 TMEM89A2RUT3 159 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 C2orf70A6NJV1 201 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 IGLV2-14P01704 120 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 CRIP3Q6Q6R5 217 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 WDFY4Q6ZS81 3184 aa11.19□□□□□ -0.62
ARHGEF39-205ENST00000490638 OR13C6PQ8NH95 151 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 RAB37Q96AX2 223 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 C1orf159Q96HA4 380 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 TMEM242Q9NWH2 141 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 TRBV24-1A0A075B6N3 115 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 VCYO14598 125 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 HOXA5P20719 270 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 AMN1Q8IY45 258 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 PIFOQ8TCI5 191 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 HIST1H4GQ99525 98 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 BUB3O43684 328 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 AZU1P20160 251 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 FANCD2OSQ96PS1 177 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 AGPAT4-IT1Q9H0P7 198 aa11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 HELZ2Q9BYK8 2649 aaKnown RBP11.18□□□□□ -0.62
ARHGEF39-205ENST00000490638 VPS25Q9BRG1 176 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 TMEM238LA0A1B0GVL6 79 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 A6NJY4 79 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 SPATA45Q537H7 98 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 GPHB5Q86YW7 130 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 ADCYAP1P18509 176 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 SLC25A34Q6PIV7 304 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 TMEM170AQ8WVE7 144 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 A6NDN8 102 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 GAGE12JA6NER3 117 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 GAGE1Q13065 139 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 GAGE4Q13068 117 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 GAGE5Q13069 117 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 GAGE13Q4V321 117 aa11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 LBHQ53QV2 105 aaPredicted RBP11.17□□□□□ -0.62
ARHGEF39-205ENST00000490638 WIPF2Q8TF74 440 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms