RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 RPL19P84098 196 aaKnown RBP11.71□□□□□ -0.54
PCCB-218ENST00000490504 TSKUQ8WUA8 353 aa11.71□□□□□ -0.54
PCCB-218ENST00000490504 NDFIP1Q9BT67 221 aa11.71□□□□□ -0.54
PCCB-218ENST00000490504 NPIPB6E9PJ23 425 aa11.7□□□□□ -0.54
PCCB-218ENST00000490504 C8orf49Q96NF6 230 aa11.7□□□□□ -0.54
PCCB-218ENST00000490504 SORL1Q92673 2214 aa11.69□□□□□ -0.54
PCCB-218ENST00000490504 IZUMO1RA6ND01 250 aa11.69□□□□□ -0.54
PCCB-218ENST00000490504 CSN3P07498 182 aa11.69□□□□□ -0.54
PCCB-218ENST00000490504 ERCC8Q13216 396 aa11.69□□□□□ -0.54
PCCB-218ENST00000490504 ACTL10Q5JWF8 245 aa11.69□□□□□ -0.54
PCCB-218ENST00000490504 ZNF738Q8NE65 137 aa11.69□□□□□ -0.54
PCCB-218ENST00000490504 Q8TAT8 98 aa11.69□□□□□ -0.54
PCCB-218ENST00000490504 C20orf173Q96LM9 149 aa11.69□□□□□ -0.54
PCCB-218ENST00000490504 U3KQK5 164 aa11.69□□□□□ -0.54
PCCB-218ENST00000490504 KMT2CQ8NEZ4 4911 aaKnown RBP11.69□□□□□ -0.54
PCCB-218ENST00000490504 TENM3Q9P273 2699 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 C2orf70A6NJV1 201 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 A8MWL6 223 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 PHOX2AO14813 284 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 TMEM78Q5T7P6 136 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 C9orf47Q6ZRZ4 202 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 SBSPONQ8IVN8 264 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 NAT8BQ9UHF3 227 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 IGKV3-7A0A075B6H7 116 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 S100A6P06703 90 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 CBLN1P23435 193 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 FAM162BQ5T6X4 162 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 Q8N1Y9 231 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 WWC2-AS2Q96NR7 200 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 NEU1Q99519 415 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 GFRA4Q9GZZ7 299 aa11.68□□□□□ -0.54
PCCB-218ENST00000490504 FRMD6-AS1P0C7T7 363 aa11.67□□□□□ -0.54
PCCB-218ENST00000490504 ID1P41134 155 aa11.67□□□□□ -0.54
PCCB-218ENST00000490504 CRIP1P50238 77 aa11.67□□□□□ -0.54
PCCB-218ENST00000490504 ZNF138P52744 262 aa11.67□□□□□ -0.54
PCCB-218ENST00000490504 SMUG1Q53HV7 270 aa11.67□□□□□ -0.54
PCCB-218ENST00000490504 OR2D3Q8NGH3 330 aa11.67□□□□□ -0.54
PCCB-218ENST00000490504 FRZBQ92765 325 aa11.67□□□□□ -0.54
PCCB-218ENST00000490504 AGPAT4-IT1Q9H0P7 198 aa11.67□□□□□ -0.54
PCCB-218ENST00000490504 PEMTQ9UBM1 199 aa11.67□□□□□ -0.54
PCCB-218ENST00000490504 FAM231BA6NCW3 169 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 HIST1H2BKO60814 126 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 HIST1H2BJP06899 126 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 TRGC1P0CF51 173 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 HIST1H2BOP23527 126 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 HIST1H2BBP33778 126 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 HIST1H2BDP58876 126 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 HIST1H2BCP62807 126 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 HIST2H2BEQ16778 126 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 COX19Q49B96 90 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.66□□□□□ -0.54
PCCB-218ENST00000490504 ADAMTSL5Q6ZMM2 481 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 NUP35Q8NFH5 326 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 DCANP1Q8TF63 244 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 HIST1H2BHQ93079 126 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 HIST1H2BNQ99877 126 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 HIST1H2BMQ99879 126 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 PPP1R14DQ9NXH3 145 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 SIGLEC8Q9NYZ4 499 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 TRAPPC1Q9Y5R8 145 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 SELENOKQ9Y6D0 94 aa11.66□□□□□ -0.54
PCCB-218ENST00000490504 HIGD1CA8MV81 97 aa11.65□□□□□ -0.54
PCCB-218ENST00000490504 SH2D1AO60880 128 aa11.65□□□□□ -0.54
PCCB-218ENST00000490504 FABP9Q0Z7S8 132 aa11.65□□□□□ -0.54
PCCB-218ENST00000490504 WDR73Q6P4I2 378 aa11.65□□□□□ -0.54
PCCB-218ENST00000490504 OR10J6PQ8NGY7 276 aa11.65□□□□□ -0.54
PCCB-218ENST00000490504 MS4A6AQ9H2W1 248 aa11.65□□□□□ -0.54
PCCB-218ENST00000490504 SPINK4O60575 86 aa11.64□□□□□ -0.55
PCCB-218ENST00000490504 GNB1LQ9BYB4 327 aa11.64□□□□□ -0.55
PCCB-218ENST00000490504 LENEPQ9Y5L5 61 aa11.64□□□□□ -0.55
PCCB-218ENST00000490504 C5orf52A6NGY3 159 aa11.64□□□□□ -0.55
PCCB-218ENST00000490504 IGHV4-30-4P0DP06 118 aa11.64□□□□□ -0.55
PCCB-218ENST00000490504 MRPL54Q6P161 138 aaKnown RBP11.64□□□□□ -0.55
PCCB-218ENST00000490504 RASL11AQ6T310 242 aa11.64□□□□□ -0.55
PCCB-218ENST00000490504 ATP5L2Q7Z4Y8 100 aa11.64□□□□□ -0.55
PCCB-218ENST00000490504 GTSF1Q8WW33 167 aa11.64□□□□□ -0.55
PCCB-218ENST00000490504 LINC00477Q96M19 166 aa11.64□□□□□ -0.55
PCCB-218ENST00000490504 STAB2Q8WWQ8 2551 aa11.64□□□□□ -0.55
PCCB-218ENST00000490504 DNAH7Q8WXX0 4024 aa11.63□□□□□ -0.55
PCCB-218ENST00000490504 MT-ND6P03923 174 aa11.63□□□□□ -0.55
PCCB-218ENST00000490504 ZNF80P51504 273 aaPredicted RBP11.63□□□□□ -0.55
PCCB-218ENST00000490504 SNRPEP62304 92 aaKnown RBP11.63□□□□□ -0.55
PCCB-218ENST00000490504 RBPMS2Q6ZRY4 209 aaKnown RBP11.63□□□□□ -0.55
PCCB-218ENST00000490504 WFDC3Q8IUB2 231 aa11.63□□□□□ -0.55
PCCB-218ENST00000490504 SAV1Q9H4B6 383 aaPredicted RBP11.63□□□□□ -0.55
PCCB-218ENST00000490504 XKRY2A2RUG3 117 aa11.62□□□□□ -0.55
PCCB-218ENST00000490504 TMEM189A5PLL7 270 aa11.62□□□□□ -0.55
PCCB-218ENST00000490504 SNURFLB1AK76 121 aa11.62□□□□□ -0.55
PCCB-218ENST00000490504 K7EQG2 157 aa11.62□□□□□ -0.55
PCCB-218ENST00000490504 OR8A1Q8NGG7 326 aa11.62□□□□□ -0.55
PCCB-218ENST00000490504 MRPL18Q9H0U6 180 aaKnown RBP11.62□□□□□ -0.55
PCCB-218ENST00000490504 C19orf73Q9NVV2 129 aa11.62□□□□□ -0.55
PCCB-218ENST00000490504 FABP5P3A8MUU1 101 aa11.61□□□□□ -0.55
PCCB-218ENST00000490504 ZNF705DP0CH99 300 aaPredicted RBP11.61□□□□□ -0.55
PCCB-218ENST00000490504 ZNF705BP0CI00 300 aaPredicted RBP11.61□□□□□ -0.55
PCCB-218ENST00000490504 GZMBP10144 247 aa11.61□□□□□ -0.55
PCCB-218ENST00000490504 FOXA3P55318 350 aaPredicted RBP11.61□□□□□ -0.55
PCCB-218ENST00000490504 SNRPD3P62318 126 aaKnown RBP11.61□□□□□ -0.55
PCCB-218ENST00000490504 PAFAH1B2P68402 229 aa11.61□□□□□ -0.55
PCCB-218ENST00000490504 CD300EQ496F6 205 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms