RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 DR1Q01658 176 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 DIAPH2-AS1Q14236 149 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 NEDD8Q15843 81 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 SPINK13Q1W4C9 94 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 C1orf140Q5VVS0 124 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 RPL7L1Q6DKI1 246 aaKnown RBP0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 PPP1R2P3Q6NXS1 205 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 IDO2Q6ZQW0 420 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 LYG2Q86SG7 212 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 PRR15Q8IV56 129 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 OR8I2Q8N0Y5 310 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 C10orf111Q8N326 155 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 MMGT1Q8N4V1 131 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 TCTEX1D1Q8N7M0 179 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 OR5A2Q8NGI9 324 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 CDC26Q8NHZ8 85 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 PPDPFLQ8WWR9 84 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 COPS9Q8WXC6 57 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 GPX7Q96SL4 187 aaPredicted RBP0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 LPAR5Q9H1C0 372 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 SLC35B3Q9H1N7 401 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 LRTM1Q9HBL6 345 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 C19orf12Q9NSK7 152 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 COA4Q9NYJ1 87 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 TAS2R8Q9NYW2 309 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 JPT1Q9UK76 154 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 PAIP2BQ9ULR5 123 aaKnown RBP0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 DNHD1Q96M86 4753 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 CCDC171Q6TFL3 1326 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 MEGF8Q7Z7M0 2845 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 USH2AO75445 5202 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 HERC2O95714 4834 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 NSD1Q96L73 2696 aaPredicted RBP0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 NAIPQ13075 1403 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 ERBINQ96RT1 1412 aa0.3□□□□□ -2.36
PRPF4B-207ENST00000490399 TCOF1Q13428 1488 aaKnown RBP0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 CEP164Q9UPV0 1460 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 TNCP24821 2201 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 CHD8Q9HCK8 2581 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 FLNAP21333 2647 aaKnown RBP0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 TRPM1Q7Z4N2 1603 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 A0A087WSZ3 146 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 TRBV7-6A0A0J9YX20 115 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 TRBV30A0A0K0K1B3 111 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 TEX49A0A1B0GTD5 131 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 C9orf170A2RU37 121 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 A6NIN4 97 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 F2Z2F3 143 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 GABARAPH6UMI1 98 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 UQCRQO14949 82 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 TPST1O60507 370 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 C1QBP02746 253 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 GYPBP06028 91 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 CXCL1P09341 107 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 CMPK1P30085 196 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 S100A11P31949 105 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 ARPP19P56211 112 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 CAV3P56539 151 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 PCBD1P61457 104 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 RPL37AP61513 92 aaKnown RBP0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 NCS1P62166 190 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 SNRPD3P62318 126 aaKnown RBP0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 QRFPP83859 136 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 PLGLB1Q02325 96 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 ASB16-AS1Q495Z4 193 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 HSD17B12Q53GQ0 312 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 LINC00305Q7Z4B0 112 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 TCTE3Q8IZS6 198 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 ATOH7Q8N100 152 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 EXOC3-AS1Q8N2X6 119 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 SMIM20Q8N5G0 67 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 OR51A4Q8NGJ6 313 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 THEM6Q8WUY1 208 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 CLEC2BQ92478 149 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 TCEAL4Q96EI5 215 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 RMND5BQ96G75 393 aaPredicted RBP0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 DMAC1Q96GE9 116 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 CCDC115Q96NT0 180 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 DSCR8Q96T75 97 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 DDA1Q9BW61 102 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 SS18L2Q9UHA2 77 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 NAT8BQ9UHF3 227 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 ERG28Q9UKR5 140 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 MED31Q9Y3C7 131 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 UFC1Q9Y3C8 167 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 ASB4Q9Y574 426 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 OVOS2A0A0G2JMS6 1433 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 FHAD1B1AJZ9 1412 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 TECPR2O15040 1411 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 DAPK1P53355 1430 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 ZNF292O60281 2723 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 UHRF1BP1LA0JNW5 1464 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 CDK12Q9NYV4 1490 aaPredicted RBP0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 WDFY4Q6ZS81 3184 aa0.29□□□□□ -2.36
PRPF4B-207ENST00000490399 DOPEY1Q5JWR5 2465 aa0.28□□□□□ -2.36
PRPF4B-207ENST00000490399 ADGBQ8N7X0 1667 aa0.28□□□□□ -2.36
PRPF4B-207ENST00000490399 TRAV12-2A0A075B6T6 113 aa0.28□□□□□ -2.36
PRPF4B-207ENST00000490399 IGHV1-24A0A0C4DH33 117 aa0.28□□□□□ -2.36
PRPF4B-207ENST00000490399 TRBV27A0A0K0K1C4 114 aa0.28□□□□□ -2.36
PRPF4B-207ENST00000490399 A0A1B0GX51 115 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms