RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 H7BYZ3 331 aa10.51□□□□□ -0.73
VPS26A-205ENST00000489656 HLA-DRB4P13762 266 aa10.51□□□□□ -0.73
VPS26A-205ENST00000489656 NUDT10Q8NFP7 164 aa10.51□□□□□ -0.73
VPS26A-205ENST00000489656 NUDT11Q96G61 164 aa10.51□□□□□ -0.73
VPS26A-205ENST00000489656 CLUHP3Q96NS8 147 aa10.51□□□□□ -0.73
VPS26A-205ENST00000489656 ASCL2Q99929 193 aa10.51□□□□□ -0.73
VPS26A-205ENST00000489656 SMCO4Q9NRQ5 59 aa10.51□□□□□ -0.73
VPS26A-205ENST00000489656 V9GYV3 84 aa10.51□□□□□ -0.73
VPS26A-205ENST00000489656 HLA-DRB4X5D2U9 266 aa10.51□□□□□ -0.73
VPS26A-205ENST00000489656 OR11H12B2RN74 326 aa10.5□□□□□ -0.73
VPS26A-205ENST00000489656 CRIP1P50238 77 aa10.5□□□□□ -0.73
VPS26A-205ENST00000489656 CT83Q5H943 113 aa10.5□□□□□ -0.73
VPS26A-205ENST00000489656 LCE2CQ5TA81 110 aa10.5□□□□□ -0.73
VPS26A-205ENST00000489656 PRR27Q6MZM9 219 aa10.5□□□□□ -0.73
VPS26A-205ENST00000489656 LINC00322Q6ZN03 302 aaPredicted RBP10.5□□□□□ -0.73
VPS26A-205ENST00000489656 ZFAND2AQ8N6M9 145 aa10.5□□□□□ -0.73
VPS26A-205ENST00000489656 OR4B1Q8NGF8 309 aa10.5□□□□□ -0.73
VPS26A-205ENST00000489656 IMMP2LQ96T52 175 aa10.5□□□□□ -0.73
VPS26A-205ENST00000489656 RNASE7Q9H1E1 156 aaKnown RBP10.5□□□□□ -0.73
VPS26A-205ENST00000489656 NOTCH3Q9UM47 2321 aa10.5□□□□□ -0.73
VPS26A-205ENST00000489656 H3BMM0 161 aa10.49□□□□□ -0.73
VPS26A-205ENST00000489656 GATCO43716 136 aaKnown RBP10.49□□□□□ -0.73
VPS26A-205ENST00000489656 FAM162BQ5T6X4 162 aa10.49□□□□□ -0.73
VPS26A-205ENST00000489656 LURAP1LQ8IV03 231 aa10.49□□□□□ -0.73
VPS26A-205ENST00000489656 DAZAP1Q96EP5 407 aaKnown RBP10.49□□□□□ -0.73
VPS26A-205ENST00000489656 KLLNB2CW77 178 aa10.48□□□□□ -0.73
VPS26A-205ENST00000489656 P01737 135 aa10.48□□□□□ -0.73
VPS26A-205ENST00000489656 LEPP41159 167 aa10.48□□□□□ -0.73
VPS26A-205ENST00000489656 ZNF80P51504 273 aaPredicted RBP10.48□□□□□ -0.73
VPS26A-205ENST00000489656 BTN1A1Q13410 526 aa10.48□□□□□ -0.73
VPS26A-205ENST00000489656 TMEM88Q6PEY1 159 aa10.48□□□□□ -0.73
VPS26A-205ENST00000489656 AMTNQ6UX39 209 aa10.48□□□□□ -0.73
VPS26A-205ENST00000489656 CBLN2Q8IUK8 224 aa10.48□□□□□ -0.73
VPS26A-205ENST00000489656 C19orf73Q9NVV2 129 aa10.48□□□□□ -0.73
VPS26A-205ENST00000489656 KNCNA6PVL3 124 aa10.47□□□□□ -0.73
VPS26A-205ENST00000489656 FABP5P3A8MUU1 101 aa10.47□□□□□ -0.73
VPS26A-205ENST00000489656 ZNF705GA8MUZ8 300 aaPredicted RBP10.47□□□□□ -0.73
VPS26A-205ENST00000489656 SH2D1AO60880 128 aa10.47□□□□□ -0.73
VPS26A-205ENST00000489656 PFN1P07737 140 aaKnown RBP10.47□□□□□ -0.73
VPS26A-205ENST00000489656 IGLL1P15814 213 aa10.47□□□□□ -0.73
VPS26A-205ENST00000489656 TSPOP30536 169 aa10.47□□□□□ -0.73
VPS26A-205ENST00000489656 ACTL10Q5JWF8 245 aa10.47□□□□□ -0.73
VPS26A-205ENST00000489656 YPEL4Q96NS1 127 aa10.47□□□□□ -0.73
VPS26A-205ENST00000489656 RPP21Q9H633 154 aaKnown RBP10.47□□□□□ -0.73
VPS26A-205ENST00000489656 IL36BQ9NZH7 164 aa10.47□□□□□ -0.73
VPS26A-205ENST00000489656 GPX1P07203 203 aa10.46□□□□□ -0.73
VPS26A-205ENST00000489656 ZNF124Q15973 351 aa10.46□□□□□ -0.73
VPS26A-205ENST00000489656 PRR31Q5SQ13 230 aa10.46□□□□□ -0.73
VPS26A-205ENST00000489656 PRR9Q5T870 116 aa10.46□□□□□ -0.73
VPS26A-205ENST00000489656 Q6AWC8 147 aa10.46□□□□□ -0.73
VPS26A-205ENST00000489656 TRAV9-1A0A075B6T8 112 aa10.45□□□□□ -0.74
VPS26A-205ENST00000489656 FAM231BA6NCW3 169 aa10.45□□□□□ -0.74
VPS26A-205ENST00000489656 A8MWL6 223 aa10.45□□□□□ -0.74
VPS26A-205ENST00000489656 CD7P09564 240 aa10.45□□□□□ -0.74
VPS26A-205ENST00000489656 CDKN1BP46527 198 aa10.45□□□□□ -0.74
VPS26A-205ENST00000489656 TRPT1Q86TN4 253 aaKnown RBP10.45□□□□□ -0.74
VPS26A-205ENST00000489656 TSKUQ8WUA8 353 aa10.45□□□□□ -0.74
VPS26A-205ENST00000489656 TRAV21A0A0B4J279 112 aa10.44□□□□□ -0.74
VPS26A-205ENST00000489656 SMIM27A0A1W2PRY6 76 aa10.44□□□□□ -0.74
VPS26A-205ENST00000489656 RBMY1BA6NDE4 496 aaKnown RBP10.44□□□□□ -0.74
VPS26A-205ENST00000489656 RBMY1EA6NEQ0 496 aaKnown RBP10.44□□□□□ -0.74
VPS26A-205ENST00000489656 RBMY1DP0C7P1 496 aaKnown RBP10.44□□□□□ -0.74
VPS26A-205ENST00000489656 S100PP25815 95 aa10.44□□□□□ -0.74
VPS26A-205ENST00000489656 ELOBQ15370 118 aa10.44□□□□□ -0.74
VPS26A-205ENST00000489656 KCNIP4Q6PIL6 250 aa10.44□□□□□ -0.74
VPS26A-205ENST00000489656 GTSCR1Q86UQ5 136 aa10.44□□□□□ -0.74
VPS26A-205ENST00000489656 MDFIQ99750 246 aa10.44□□□□□ -0.74
VPS26A-205ENST00000489656 GFRA4Q9GZZ7 299 aa10.44□□□□□ -0.74
VPS26A-205ENST00000489656 DNAH3Q8TD57 4116 aa10.43□□□□□ -0.74
VPS26A-205ENST00000489656 TRBV24-1A0A075B6N3 115 aa10.43□□□□□ -0.74
VPS26A-205ENST00000489656 C7orf71A4D174 169 aa10.43□□□□□ -0.74
VPS26A-205ENST00000489656 AMBPP02760 352 aa10.43□□□□□ -0.74
VPS26A-205ENST00000489656 CXCL1P09341 107 aa10.43□□□□□ -0.74
VPS26A-205ENST00000489656 RPS20P60866 119 aaKnown RBP10.43□□□□□ -0.74
VPS26A-205ENST00000489656 STHQ8IWL8 128 aa10.43□□□□□ -0.74
VPS26A-205ENST00000489656 OR2D3Q8NGH3 330 aa10.43□□□□□ -0.74
VPS26A-205ENST00000489656 PYGO2Q9BRQ0 406 aa10.43□□□□□ -0.74
VPS26A-205ENST00000489656 XKRY2A2RUG3 117 aa10.42□□□□□ -0.74
VPS26A-205ENST00000489656 TMEM189A5PLL7 270 aa10.42□□□□□ -0.74
VPS26A-205ENST00000489656 COLCA2A8K830 154 aa10.42□□□□□ -0.74
VPS26A-205ENST00000489656 CA1P00915 261 aaPredicted RBP10.42□□□□□ -0.74
VPS26A-205ENST00000489656 IGKV3-20P01619 116 aa10.42□□□□□ -0.74
VPS26A-205ENST00000489656 RNASE4P34096 147 aaKnown RBP10.42□□□□□ -0.74
VPS26A-205ENST00000489656 FOXA3P55318 350 aaPredicted RBP10.42□□□□□ -0.74
VPS26A-205ENST00000489656 RIPPLY3P57055 190 aa10.42□□□□□ -0.74
VPS26A-205ENST00000489656 KIR3DS1Q14943 382 aa10.42□□□□□ -0.74
VPS26A-205ENST00000489656 SPINK13Q1W4C9 94 aa10.42□□□□□ -0.74
VPS26A-205ENST00000489656 GFI1BQ5VTD9 330 aa10.42□□□□□ -0.74
VPS26A-205ENST00000489656 BTF3L4Q96K17 158 aa10.42□□□□□ -0.74
VPS26A-205ENST00000489656 C11orf21Q9P2W6 132 aa10.42□□□□□ -0.74
VPS26A-205ENST00000489656 URGCP-MRPS24S4R325 110 aa10.42□□□□□ -0.74
VPS26A-205ENST00000489656 PKD1L1Q8TDX9 2849 aa10.42□□□□□ -0.74
VPS26A-205ENST00000489656 M0R2Z0 102 aa10.41□□□□□ -0.74
VPS26A-205ENST00000489656 CRXO43186 299 aaPredicted RBP10.41□□□□□ -0.74
VPS26A-205ENST00000489656 ZNF324O75467 553 aaPredicted RBP10.41□□□□□ -0.74
VPS26A-205ENST00000489656 RPL19P84098 196 aaKnown RBP10.41□□□□□ -0.74
VPS26A-205ENST00000489656 EGFEM1PQ0D2K5 195 aa10.41□□□□□ -0.74
VPS26A-205ENST00000489656 ZNF575Q86XF7 245 aa10.41□□□□□ -0.74
VPS26A-205ENST00000489656 ZMAT5Q9UDW3 170 aaKnown RBP10.41□□□□□ -0.74
VPS26A-205ENST00000489656 IGKV3D-20A0A0C4DH25 116 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms