RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 TMEM78Q5T7P6 136 aa9.32□□□□□ -0.92
UFD1-209ENST00000489406 A0A0B4J2A0 478 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 GAGE12JA6NER3 117 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 WRBO00258 174 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 TMEM127O75204 238 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 GAGE1Q13065 139 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 GAGE4Q13068 117 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 GAGE5Q13069 117 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 ELOBQ15370 118 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 GUK1Q16774 197 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 GAGE13Q4V321 117 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 SPANXN5Q5MJ07 72 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 FAM159AQ6UWV7 190 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 OR10G9Q8NGN4 311 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 ZNF492Q9P255 531 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 SHPKQ9UHJ6 478 aa9.31□□□□□ -0.92
UFD1-209ENST00000489406 A0A087WWC5 75 aa9.3□□□□□ -0.92
UFD1-209ENST00000489406 A0A087WX48 190 aa9.3□□□□□ -0.92
UFD1-209ENST00000489406 SMIM31A0A1B0GVY4 71 aa9.3□□□□□ -0.92
UFD1-209ENST00000489406 H3BP45 60 aa9.3□□□□□ -0.92
UFD1-209ENST00000489406 CYB561D1Q8N8Q1 229 aa9.3□□□□□ -0.92
UFD1-209ENST00000489406 OR51S1Q8NGJ8 323 aa9.3□□□□□ -0.92
UFD1-209ENST00000489406 LYPD6BQ8NI32 183 aa9.3□□□□□ -0.92
UFD1-209ENST00000489406 IGHV3-64A0A075B6Q5 118 aa9.29□□□□□ -0.92
UFD1-209ENST00000489406 GNRH2O43555 120 aa9.29□□□□□ -0.92
UFD1-209ENST00000489406 COX7A2P2O60397 106 aa9.29□□□□□ -0.92
UFD1-209ENST00000489406 SLC38A11Q08AI6 406 aa9.29□□□□□ -0.92
UFD1-209ENST00000489406 CFAP126Q5VTH2 177 aa9.29□□□□□ -0.92
UFD1-209ENST00000489406 ENHOQ6UWT2 76 aa9.29□□□□□ -0.92
UFD1-209ENST00000489406 ZNF546Q86UE3 836 aa9.29□□□□□ -0.92
UFD1-209ENST00000489406 Q8TAT8 98 aa9.29□□□□□ -0.92
UFD1-209ENST00000489406 RAB2BQ8WUD1 216 aa9.29□□□□□ -0.92
UFD1-209ENST00000489406 CIB3Q96Q77 187 aaPredicted RBP9.29□□□□□ -0.92
UFD1-209ENST00000489406 VCXQ9H320 206 aa9.29□□□□□ -0.92
UFD1-209ENST00000489406 NAGKQ9UJ70 344 aa9.29□□□□□ -0.92
UFD1-209ENST00000489406 KCNIP3Q9Y2W7 256 aa9.29□□□□□ -0.92
UFD1-209ENST00000489406 CCSO14618 274 aa9.28□□□□□ -0.92
UFD1-209ENST00000489406 HIST1H1EP10412 219 aaKnown RBP9.28□□□□□ -0.92
UFD1-209ENST00000489406 SURF2Q15527 256 aaPredicted RBP9.28□□□□□ -0.92
UFD1-209ENST00000489406 PXDC1Q5TGL8 231 aa9.28□□□□□ -0.92
UFD1-209ENST00000489406 PRELID1Q9Y255 219 aa9.28□□□□□ -0.92
UFD1-209ENST00000489406 MUC21A0A0G2JKD1 596 aa9.27□□□□□ -0.93
UFD1-209ENST00000489406 PGPA6NDG6 321 aa9.27□□□□□ -0.93
UFD1-209ENST00000489406 GOSR2O14653 212 aa9.27□□□□□ -0.93
UFD1-209ENST00000489406 RAB3DO95716 219 aa9.27□□□□□ -0.93
UFD1-209ENST00000489406 TBPP20226 339 aa9.27□□□□□ -0.93
UFD1-209ENST00000489406 RRAS2P62070 204 aaPredicted RBP9.27□□□□□ -0.93
UFD1-209ENST00000489406 C10orf113Q5VZT2 155 aa9.27□□□□□ -0.93
UFD1-209ENST00000489406 EXOC3-AS1Q8N2X6 119 aa9.27□□□□□ -0.93
UFD1-209ENST00000489406 PSORS1C2Q9UIG4 136 aa9.27□□□□□ -0.93
UFD1-209ENST00000489406 GPR132Q9UNW8 380 aa9.27□□□□□ -0.93
UFD1-209ENST00000489406 STRAPQ9Y3F4 350 aaKnown RBP9.27□□□□□ -0.93
UFD1-209ENST00000489406 K7EPK0 472 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 AGPAT2O15120 278 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 SYNGR2O43760 224 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 CIDEAO60543 219 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 MED6O75586 246 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 CRPP02741 224 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 LINC00694P0DN24 101 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 INPP1P49441 399 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 ZNF138P52744 262 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 CNBPP62633 177 aaKnown RBP9.26□□□□□ -0.93
UFD1-209ENST00000489406 ZNF266Q14584 549 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 FAAP20Q6NZ36 180 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 CROCCP3Q8IVE0 287 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 ZNF664Q8N3J9 261 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 Q9UF83 564 aa9.26□□□□□ -0.93
UFD1-209ENST00000489406 TRBV19A0A075B6N1 114 aa9.25□□□□□ -0.93
UFD1-209ENST00000489406 NDUFB4O95168 129 aa9.25□□□□□ -0.93
UFD1-209ENST00000489406 MGST1P10620 155 aaKnown RBP9.25□□□□□ -0.93
UFD1-209ENST00000489406 ZNF876PQ49A33 203 aa9.25□□□□□ -0.93
UFD1-209ENST00000489406 LCE2CQ5TA81 110 aa9.25□□□□□ -0.93
UFD1-209ENST00000489406 KCNIP4Q6PIL6 250 aa9.25□□□□□ -0.93
UFD1-209ENST00000489406 C20orf85Q9H1P6 137 aa9.25□□□□□ -0.93
UFD1-209ENST00000489406 NPVFQ9HCQ7 196 aa9.25□□□□□ -0.93
UFD1-209ENST00000489406 TGFBR1P36897 503 aa9.24□□□□□ -0.93
UFD1-209ENST00000489406 AQP4P55087 323 aa9.24□□□□□ -0.93
UFD1-209ENST00000489406 CACNG7P62955 275 aa9.24□□□□□ -0.93
UFD1-209ENST00000489406 MAJINQ3KP22 176 aa9.24□□□□□ -0.93
UFD1-209ENST00000489406 Q6AWC8 147 aa9.24□□□□□ -0.93
UFD1-209ENST00000489406 PRR26Q8N8Z3 221 aa9.24□□□□□ -0.93
UFD1-209ENST00000489406 SOSTQ9BQB4 213 aa9.24□□□□□ -0.93
UFD1-209ENST00000489406 CHCHD7Q9BUK0 85 aa9.24□□□□□ -0.93
UFD1-209ENST00000489406 COMMD3Q9UBI1 195 aa9.24□□□□□ -0.93
UFD1-209ENST00000489406 BLOC1S6Q9UL45 172 aa9.24□□□□□ -0.93
UFD1-209ENST00000489406 TIMM9Q9Y5J7 89 aa9.24□□□□□ -0.93
UFD1-209ENST00000489406 C15orf54Q8N8G6 183 aa9.23□□□□□ -0.93
UFD1-209ENST00000489406 TMEM75Q8N9X5 138 aa9.23□□□□□ -0.93
UFD1-209ENST00000489406 SAMD10Q9BYL1 202 aa9.23□□□□□ -0.93
UFD1-209ENST00000489406 MTFP1Q9UDX5 166 aa9.23□□□□□ -0.93
UFD1-209ENST00000489406 hDV102S1A0JD36 115 aa9.22□□□□□ -0.93
UFD1-209ENST00000489406 APOA1P02647 267 aa9.22□□□□□ -0.93
UFD1-209ENST00000489406 SLPIP03973 132 aa9.22□□□□□ -0.93
UFD1-209ENST00000489406 RPS19P39019 145 aaKnown RBP9.22□□□□□ -0.93
UFD1-209ENST00000489406 STPG4Q8N801 248 aa9.22□□□□□ -0.93
UFD1-209ENST00000489406 TMEM229BQ8NBD8 167 aa9.22□□□□□ -0.93
UFD1-209ENST00000489406 CLRN3Q8NCR9 226 aa9.22□□□□□ -0.93
UFD1-209ENST00000489406 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.21□□□□□ -0.94
UFD1-209ENST00000489406 TRBV7-9A0A0J9YWB2 115 aa9.21□□□□□ -0.94
UFD1-209ENST00000489406 TCRBP04435 133 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 951.7 ms