RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.89□□□□□ -2.27
RFC4-213ENST00000489028 TRAV23DV6A0A075B6W5 121 aa0.89□□□□□ -2.27
RFC4-213ENST00000489028 NCR3O14931 201 aa0.89□□□□□ -2.27
RFC4-213ENST00000489028 ARPC5O15511 151 aa0.89□□□□□ -2.27
RFC4-213ENST00000489028 EDF1O60869 148 aaKnown RBP0.89□□□□□ -2.27
RFC4-213ENST00000489028 MT-ND4LP03901 98 aa0.89□□□□□ -2.27
RFC4-213ENST00000489028 SLC25A5P05141 298 aaKnown RBP0.89□□□□□ -2.27
RFC4-213ENST00000489028 PCBD1P61457 104 aa0.89□□□□□ -2.27
RFC4-213ENST00000489028 QRFPP83859 136 aa0.89□□□□□ -2.27
RFC4-213ENST00000489028 C3orf62Q6ZUJ4 267 aa0.89□□□□□ -2.27
RFC4-213ENST00000489028 TCTEX1D1Q8N7M0 179 aa0.89□□□□□ -2.27
RFC4-213ENST00000489028 BOKQ9UMX3 212 aaPredicted RBP0.89□□□□□ -2.27
RFC4-213ENST00000489028 IGHV1-24A0A0C4DH33 117 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 A0A1B0GW64 132 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 A0A1W2PPB8 328 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 A0A1W2PRS3 328 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 KIR3DP1A8MWS1 328 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 CKS1BP61024 79 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 SMCO1Q147U7 214 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 TMEM91Q6ZNR0 172 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 OR10AC1Q8NH08 325 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 OTOSQ8NHW6 89 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 BANF2Q9H503 90 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 METTL1Q9UBP6 276 aaKnown RBP0.88□□□□□ -2.27
RFC4-213ENST00000489028 MYO18AQ92614 2054 aaKnown RBP0.88□□□□□ -2.27
RFC4-213ENST00000489028 PLXNA4Q9HCM2 1894 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 FGD6Q6ZV73 1430 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 ERBINQ96RT1 1412 aa0.88□□□□□ -2.27
RFC4-213ENST00000489028 COL6A6A6NMZ7 2263 aa0.87□□□□□ -2.27
RFC4-213ENST00000489028 FER1L6Q2WGJ9 1857 aa0.87□□□□□ -2.27
RFC4-213ENST00000489028 HLA-DRB4P13762 266 aa0.87□□□□□ -2.27
RFC4-213ENST00000489028 PDE6GP18545 87 aa0.87□□□□□ -2.27
RFC4-213ENST00000489028 KRTAP10-4P60372 401 aaPredicted RBP0.87□□□□□ -2.27
RFC4-213ENST00000489028 OCIAD2Q56VL3 154 aa0.87□□□□□ -2.27
RFC4-213ENST00000489028 C10orf111Q8N326 155 aa0.87□□□□□ -2.27
RFC4-213ENST00000489028 MMGT1Q8N4V1 131 aa0.87□□□□□ -2.27
RFC4-213ENST00000489028 OR8J3Q8NGG0 315 aa0.87□□□□□ -2.27
RFC4-213ENST00000489028 HLA-DRB4X5D2U9 266 aa0.87□□□□□ -2.27
RFC4-213ENST00000489028 ALPK3Q96L96 1907 aa0.87□□□□□ -2.27
RFC4-213ENST00000489028 NCOA6Q14686 2063 aaPredicted RBP0.87□□□□□ -2.27
RFC4-213ENST00000489028 MCM3APO60318 1980 aa0.87□□□□□ -2.27
RFC4-213ENST00000489028 CHD3Q12873 2000 aaKnown RBP0.86□□□□□ -2.27
RFC4-213ENST00000489028 PTPRFP10586 1907 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 ZNF727A8MUV8 499 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 YPEL1O60688 119 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 IGLV3-1P01715 115 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 IGHV3-30P01768 117 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 GYPBP06028 91 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 IGHV3-30-5P0DP03 117 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 KDELR1P24390 212 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 AKR1D1P51857 326 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 LINC00575Q6W349 94 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 IDO2Q6ZQW0 420 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 LPAR5Q9H1C0 372 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 SLC35B3Q9H1N7 401 aa0.86□□□□□ -2.27
RFC4-213ENST00000489028 COL1A1P02452 1464 aaPredicted RBP0.86□□□□□ -2.27
RFC4-213ENST00000489028 SNRNP200O75643 2136 aaKnown RBP0.85□□□□□ -2.27
RFC4-213ENST00000489028 A6NN06 94 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 J3QR89 54 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 RBP4P02753 201 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 CD14P08571 375 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 EVI2AP22794 236 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 EFNA4P52798 201 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 ARPC4P59998 168 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 NCS1P62166 190 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 SNRPD3P62318 126 aaKnown RBP0.85□□□□□ -2.27
RFC4-213ENST00000489028 S100A12P80511 92 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 PLGLB1Q02325 96 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 MED12Q93074 2177 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 LIMD2Q9BT23 127 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 COPZ2Q9P299 210 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 ZFC3H1O60293 1989 aaKnown RBP0.85□□□□□ -2.27
RFC4-213ENST00000489028 TANC2Q9HCD6 1990 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 SIP14410 1827 aa0.85□□□□□ -2.27
RFC4-213ENST00000489028 MUC4Q99102 2169 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 ASCC3Q8N3C0 2202 aaKnown RBP0.84□□□□□ -2.27
RFC4-213ENST00000489028 DLG5Q8TDM6 1919 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 OVOS2A0A0J9YW53 1432 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 OVOS2Q6IE36 1432 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 M0R2Z0 102 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 CD3DP04234 171 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 ADCYAP1P18509 176 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 FXYD4P59646 89 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 HIST1H1AQ02539 215 aaPredicted RBP0.84□□□□□ -2.27
RFC4-213ENST00000489028 RHOHQ15669 191 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 SMIM21Q3B7S5 101 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 SBSPONQ8IVN8 264 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 COMMD3Q9UBI1 195 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 DNAJC15Q9Y5T4 150 aa0.84□□□□□ -2.27
RFC4-213ENST00000489028 XIRP1Q702N8 1843 aaKnown RBP0.84□□□□□ -2.28
RFC4-213ENST00000489028 PEAK1Q9H792 1746 aa0.84□□□□□ -2.28
RFC4-213ENST00000489028 DISP2A7MBM2 1401 aa0.83□□□□□ -2.28
RFC4-213ENST00000489028 ARHGAP31Q2M1Z3 1444 aa0.83□□□□□ -2.28
RFC4-213ENST00000489028 A0A1W2PPM0 123 aa0.83□□□□□ -2.28
RFC4-213ENST00000489028 TMEM30CPA0ZSE6 113 aa0.83□□□□□ -2.28
RFC4-213ENST00000489028 CDC42EP2O14613 210 aa0.83□□□□□ -2.28
RFC4-213ENST00000489028 MPC1LP0DKB6 136 aa0.83□□□□□ -2.28
RFC4-213ENST00000489028 CSAG1Q6PB30 78 aa0.83□□□□□ -2.28
RFC4-213ENST00000489028 SMIM3Q9BZL3 60 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms