RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PAXXQ9BUH6 204 aa12.56□□□□□ -0.4
HDAC6-231ENST00000488905 KCNIP2Q9NS61 270 aa12.56□□□□□ -0.4
HDAC6-231ENST00000488905 HHLA3Q9XRX5 114 aa12.56□□□□□ -0.4
HDAC6-231ENST00000488905 FUSP35637 526 aaKnown RBP eCLIP12.55□□□□□ -0.4
HDAC6-231ENST00000488905 CDPF1Q6NVV7 123 aa12.55□□□□□ -0.4
HDAC6-231ENST00000488905 LYPD5Q6UWN5 251 aa12.55□□□□□ -0.4
HDAC6-231ENST00000488905 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
HDAC6-231ENST00000488905 PTTG2Q9NZH5 202 aa12.55□□□□□ -0.4
HDAC6-231ENST00000488905 PRAF2O60831 178 aa12.54□□□□□ -0.4
HDAC6-231ENST00000488905 NEGR1Q7Z3B1 354 aa12.54□□□□□ -0.4
HDAC6-231ENST00000488905 NFE4Q86UQ8 179 aa12.54□□□□□ -0.4
HDAC6-231ENST00000488905 SLC25A31Q9H0C2 315 aa12.54□□□□□ -0.4
HDAC6-231ENST00000488905 TNFRSF18Q9Y5U5 241 aa12.54□□□□□ -0.4
HDAC6-231ENST00000488905 RBAKDNA6NC62 111 aa12.53□□□□□ -0.4
HDAC6-231ENST00000488905 EPM2AB3EWF7 344 aa12.53□□□□□ -0.4
HDAC6-231ENST00000488905 E5RGE8 158 aa12.53□□□□□ -0.4
HDAC6-231ENST00000488905 OR7C2O60412 319 aa12.53□□□□□ -0.4
HDAC6-231ENST00000488905 ZNF266Q14584 549 aa12.53□□□□□ -0.4
HDAC6-231ENST00000488905 MUC21Q5SSG8 566 aa12.53□□□□□ -0.4
HDAC6-231ENST00000488905 WDR61Q9GZS3 305 aaKnown RBP12.53□□□□□ -0.4
HDAC6-231ENST00000488905 OR5AC2Q9NZP5 309 aa12.53□□□□□ -0.4
HDAC6-231ENST00000488905 LY96Q9Y6Y9 160 aa12.53□□□□□ -0.4
HDAC6-231ENST00000488905 DMBT1Q9UGM3 2413 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-231ENST00000488905 MYCBP2O75592 4640 aa12.52□□□□□ -0.41
HDAC6-231ENST00000488905 TRGV4A0A0C4DH28 118 aa12.52□□□□□ -0.41
HDAC6-231ENST00000488905 K7EQD1 137 aa12.52□□□□□ -0.41
HDAC6-231ENST00000488905 SFTA3P0C7M3 94 aa12.52□□□□□ -0.41
HDAC6-231ENST00000488905 DNAH10OSP0CZ25 163 aa12.52□□□□□ -0.41
HDAC6-231ENST00000488905 SRIP30626 198 aa12.52□□□□□ -0.41
HDAC6-231ENST00000488905 CSN1S1P47710 185 aa12.52□□□□□ -0.41
HDAC6-231ENST00000488905 MDFICQ9P1T7 246 aa12.52□□□□□ -0.41
HDAC6-231ENST00000488905 SIX6O95475 246 aa12.51□□□□□ -0.41
HDAC6-231ENST00000488905 UBE2L3P68036 154 aaKnown RBP12.51□□□□□ -0.41
HDAC6-231ENST00000488905 LRRC37A5PQ49AS3 106 aa12.51□□□□□ -0.41
HDAC6-231ENST00000488905 Q6AWC8 147 aa12.51□□□□□ -0.41
HDAC6-231ENST00000488905 MZT2BQ6NZ67 158 aa12.51□□□□□ -0.41
HDAC6-231ENST00000488905 WFDC10BQ8IUB3 73 aa12.51□□□□□ -0.41
HDAC6-231ENST00000488905 OR10G4Q8NGN3 311 aa12.51□□□□□ -0.41
HDAC6-231ENST00000488905 PCNPQ8WW12 178 aaKnown RBP12.51□□□□□ -0.41
HDAC6-231ENST00000488905 ZNF479Q96JC4 524 aa12.51□□□□□ -0.41
HDAC6-231ENST00000488905 NMES1Q9C002 83 aa12.51□□□□□ -0.41
HDAC6-231ENST00000488905 TRAV9-2A0A087WT02 112 aa12.5□□□□□ -0.41
HDAC6-231ENST00000488905 A0A087WTM6 91 aa12.5□□□□□ -0.41
HDAC6-231ENST00000488905 C17orf112F2Z3M2 114 aa12.5□□□□□ -0.41
HDAC6-231ENST00000488905 RANP62826 216 aaKnown RBP12.5□□□□□ -0.41
HDAC6-231ENST00000488905 ASAH1Q13510 395 aa12.5□□□□□ -0.41
HDAC6-231ENST00000488905 LYPD1Q8N2G4 141 aa12.5□□□□□ -0.41
HDAC6-231ENST00000488905 RASL10AQ92737 203 aa12.5□□□□□ -0.41
HDAC6-231ENST00000488905 TRGV11A0A075B6L2 103 aa12.49□□□□□ -0.41
HDAC6-231ENST00000488905 H0YIZ8 118 aa12.49□□□□□ -0.41
HDAC6-231ENST00000488905 K7EP13 123 aa12.49□□□□□ -0.41
HDAC6-231ENST00000488905 GYPEP15421 78 aa12.49□□□□□ -0.41
HDAC6-231ENST00000488905 XGP55808 180 aa12.49□□□□□ -0.41
HDAC6-231ENST00000488905 TMEM183BQ1AE95 376 aa12.49□□□□□ -0.41
HDAC6-231ENST00000488905 IQCF2Q8IXL9 164 aa12.49□□□□□ -0.41
HDAC6-231ENST00000488905 TMEM183AQ8IXX5 376 aa12.49□□□□□ -0.41
HDAC6-231ENST00000488905 SPXQ9BT56 116 aa12.49□□□□□ -0.41
HDAC6-231ENST00000488905 MSRB1Q9NZV6 116 aa12.49□□□□□ -0.41
HDAC6-231ENST00000488905 NDUFA13Q9P0J0 144 aa12.49□□□□□ -0.41
HDAC6-231ENST00000488905 LENEPQ9Y5L5 61 aa12.49□□□□□ -0.41
HDAC6-231ENST00000488905 DIRC3C9JPN6 131 aa12.48□□□□□ -0.41
HDAC6-231ENST00000488905 ORM1P02763 201 aa12.48□□□□□ -0.41
HDAC6-231ENST00000488905 KHDC3LQ587J8 217 aa12.48□□□□□ -0.41
HDAC6-231ENST00000488905 FAM159AQ6UWV7 190 aa12.48□□□□□ -0.41
HDAC6-231ENST00000488905 ATP5SQ99766 215 aa12.48□□□□□ -0.41
HDAC6-231ENST00000488905 EVI2AP22794 236 aa12.47□□□□□ -0.41
HDAC6-231ENST00000488905 ENKURQ8TC29 256 aa12.47□□□□□ -0.41
HDAC6-231ENST00000488905 TXNDC17Q9BRA2 123 aa12.47□□□□□ -0.41
HDAC6-231ENST00000488905 TRAV4A0A0B4J268 109 aa12.46□□□□□ -0.41
HDAC6-231ENST00000488905 C9JCJ5 164 aa12.46□□□□□ -0.41
HDAC6-231ENST00000488905 IFNA5P01569 189 aa12.46□□□□□ -0.41
HDAC6-231ENST00000488905 KRTAP10-1P60331 282 aa12.46□□□□□ -0.41
HDAC6-231ENST00000488905 FFAR4Q5NUL3 377 aa12.46□□□□□ -0.41
HDAC6-231ENST00000488905 TMED6Q8WW62 240 aa12.46□□□□□ -0.41
HDAC6-231ENST00000488905 NAGKQ9UJ70 344 aa12.46□□□□□ -0.41
HDAC6-231ENST00000488905 DNAH8Q96JB1 4490 aa12.45□□□□□ -0.42
HDAC6-231ENST00000488905 TAS2R45P59539 299 aa12.45□□□□□ -0.42
HDAC6-231ENST00000488905 CYCSP99999 105 aaKnown RBP12.45□□□□□ -0.42
HDAC6-231ENST00000488905 TDRG1Q3Y452 100 aa12.45□□□□□ -0.42
HDAC6-231ENST00000488905 Q5VSD8 79 aa12.45□□□□□ -0.42
HDAC6-231ENST00000488905 CRYGDP07320 174 aa12.44□□□□□ -0.42
HDAC6-231ENST00000488905 INAFM2P0DMQ5 153 aa12.44□□□□□ -0.42
HDAC6-231ENST00000488905 LINC00299Q6ZSB3 139 aa12.44□□□□□ -0.42
HDAC6-231ENST00000488905 C10orf126Q8N4M7 172 aa12.44□□□□□ -0.42
HDAC6-231ENST00000488905 PPP1R1CQ8WVI7 109 aa12.44□□□□□ -0.42
HDAC6-231ENST00000488905 HYLS1Q96M11 299 aa12.44□□□□□ -0.42
HDAC6-231ENST00000488905 OTORQ9NRC9 128 aa12.44□□□□□ -0.42
HDAC6-231ENST00000488905 RPH3ALQ9UNE2 315 aa12.44□□□□□ -0.42
HDAC6-231ENST00000488905 HSPB11Q9Y547 144 aa12.44□□□□□ -0.42
HDAC6-231ENST00000488905 SRRM2Q9UQ35 2752 aaKnown RBP12.43□□□□□ -0.42
HDAC6-231ENST00000488905 M0R2P5 195 aa12.43□□□□□ -0.42
HDAC6-231ENST00000488905 H2BFSP57053 126 aa12.43□□□□□ -0.42
HDAC6-231ENST00000488905 OR4C5Q8NGB2 326 aa12.43□□□□□ -0.42
HDAC6-231ENST00000488905 S100ZQ8WXG8 99 aa12.43□□□□□ -0.42
HDAC6-231ENST00000488905 FRZBQ92765 325 aa12.43□□□□□ -0.42
HDAC6-231ENST00000488905 FLG2Q5D862 2391 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-231ENST00000488905 IGHV3-16A0A0C4DH30 117 aa12.42□□□□□ -0.42
HDAC6-231ENST00000488905 LOC100131303A0A0U1RQF7 123 aa12.42□□□□□ -0.42
HDAC6-231ENST00000488905 EIF3GO75821 320 aaKnown RBP eCLIP12.42□□□□□ -0.42
HDAC6-231ENST00000488905 CMTM2Q8TAZ6 248 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms