RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 CSN1S1P47710 185 aa12.6□□□□□ -0.39
ATG9A-222ENST00000488833 UBE2L3P68036 154 aaKnown RBP12.6□□□□□ -0.39
ATG9A-222ENST00000488833 ICOSQ9Y6W8 199 aa12.6□□□□□ -0.39
ATG9A-222ENST00000488833 H2BFSP57053 126 aa12.59□□□□□ -0.39
ATG9A-222ENST00000488833 RANP62826 216 aaKnown RBP12.59□□□□□ -0.39
ATG9A-222ENST00000488833 IFITM3Q01628 133 aa12.59□□□□□ -0.39
ATG9A-222ENST00000488833 ZNF415Q09FC8 603 aa12.59□□□□□ -0.39
ATG9A-222ENST00000488833 FFAR4Q5NUL3 377 aa12.59□□□□□ -0.39
ATG9A-222ENST00000488833 PPP1R1CQ8WVI7 109 aa12.59□□□□□ -0.39
ATG9A-222ENST00000488833 TRBV7-9A0A0J9YWB2 115 aa12.58□□□□□ -0.4
ATG9A-222ENST00000488833 HSPB11Q9Y547 144 aa12.58□□□□□ -0.4
ATG9A-222ENST00000488833 RBAKDNA6NC62 111 aa12.57□□□□□ -0.4
ATG9A-222ENST00000488833 SSNA1O43805 119 aa12.57□□□□□ -0.4
ATG9A-222ENST00000488833 PET100P0DJ07 73 aa12.57□□□□□ -0.4
ATG9A-222ENST00000488833 BTF3P20290 206 aaKnown RBP12.57□□□□□ -0.4
ATG9A-222ENST00000488833 LINC00315P59091 139 aa12.57□□□□□ -0.4
ATG9A-222ENST00000488833 KHDC3LQ587J8 217 aa12.57□□□□□ -0.4
ATG9A-222ENST00000488833 MUC21Q5SSG8 566 aa12.57□□□□□ -0.4
ATG9A-222ENST00000488833 LYPD1Q8N2G4 141 aa12.57□□□□□ -0.4
ATG9A-222ENST00000488833 MAPKAPK5-AS1Q8N8E1 139 aa12.57□□□□□ -0.4
ATG9A-222ENST00000488833 SMIM3Q9BZL3 60 aa12.57□□□□□ -0.4
ATG9A-222ENST00000488833 PRO0255Q9UI72 69 aa12.57□□□□□ -0.4
ATG9A-222ENST00000488833 SIVA1O15304 175 aa12.56□□□□□ -0.4
ATG9A-222ENST00000488833 NXPH4O95158 308 aa12.56□□□□□ -0.4
ATG9A-222ENST00000488833 IFNA5P01569 189 aa12.56□□□□□ -0.4
ATG9A-222ENST00000488833 TAS2R45P59539 299 aa12.56□□□□□ -0.4
ATG9A-222ENST00000488833 ZNF266Q14584 549 aa12.56□□□□□ -0.4
ATG9A-222ENST00000488833 C8orf49Q96NF6 230 aa12.56□□□□□ -0.4
ATG9A-222ENST00000488833 MPC2O95563 127 aa12.55□□□□□ -0.4
ATG9A-222ENST00000488833 CRYBA4P53673 196 aa12.55□□□□□ -0.4
ATG9A-222ENST00000488833 KRTAP10-2P60368 255 aa12.55□□□□□ -0.4
ATG9A-222ENST00000488833 SLAQ13239 276 aa12.55□□□□□ -0.4
ATG9A-222ENST00000488833 SCGB1C1Q8TD33 95 aa12.55□□□□□ -0.4
ATG9A-222ENST00000488833 MARVELD1Q9BSK0 173 aa12.55□□□□□ -0.4
ATG9A-222ENST00000488833 HHLA3Q9XRX5 114 aa12.55□□□□□ -0.4
ATG9A-222ENST00000488833 DIRC3C9JPN6 131 aa12.54□□□□□ -0.4
ATG9A-222ENST00000488833 EIF3GO75821 320 aaKnown RBP eCLIP12.54□□□□□ -0.4
ATG9A-222ENST00000488833 RPL12P30050 165 aaKnown RBP12.54□□□□□ -0.4
ATG9A-222ENST00000488833 FHL2Q14192 279 aa12.54□□□□□ -0.4
ATG9A-222ENST00000488833 TMEM183BQ1AE95 376 aa12.54□□□□□ -0.4
ATG9A-222ENST00000488833 TMEM183AQ8IXX5 376 aa12.54□□□□□ -0.4
ATG9A-222ENST00000488833 HYLS1Q96M11 299 aa12.54□□□□□ -0.4
ATG9A-222ENST00000488833 PTTG2Q9NZH5 202 aa12.54□□□□□ -0.4
ATG9A-222ENST00000488833 MDFICQ9P1T7 246 aa12.54□□□□□ -0.4
ATG9A-222ENST00000488833 MBD2Q9UBB5 411 aa12.54□□□□□ -0.4
ATG9A-222ENST00000488833 RPH3ALQ9UNE2 315 aa12.54□□□□□ -0.4
ATG9A-222ENST00000488833 TRGV4A0A0C4DH28 118 aa12.53□□□□□ -0.4
ATG9A-222ENST00000488833 MRPL23Q16540 153 aaKnown RBP12.53□□□□□ -0.4
ATG9A-222ENST00000488833 Q6AWC8 147 aa12.53□□□□□ -0.4
ATG9A-222ENST00000488833 LENEPQ9Y5L5 61 aa12.53□□□□□ -0.4
ATG9A-222ENST00000488833 TRGV11A0A075B6L2 103 aa12.52□□□□□ -0.41
ATG9A-222ENST00000488833 SFTA3P0C7M3 94 aa12.52□□□□□ -0.41
ATG9A-222ENST00000488833 DEFA1P59665 94 aa12.52□□□□□ -0.41
ATG9A-222ENST00000488833 DEFA3P59666 94 aa12.52□□□□□ -0.41
ATG9A-222ENST00000488833 FAM159AQ6UWV7 190 aa12.52□□□□□ -0.41
ATG9A-222ENST00000488833 CMTM2Q8TAZ6 248 aa12.52□□□□□ -0.41
ATG9A-222ENST00000488833 OTORQ9NRC9 128 aa12.52□□□□□ -0.41
ATG9A-222ENST00000488833 NAGKQ9UJ70 344 aa12.52□□□□□ -0.41
ATG9A-222ENST00000488833 Q6ZRN7 208 aaPredicted RBP12.51□□□□□ -0.41
ATG9A-222ENST00000488833 NEGR1Q7Z3B1 354 aa12.51□□□□□ -0.41
ATG9A-222ENST00000488833 ZNF479Q96JC4 524 aa12.51□□□□□ -0.41
ATG9A-222ENST00000488833 SPXQ9BT56 116 aa12.51□□□□□ -0.41
ATG9A-222ENST00000488833 PGPA6NDG6 321 aa12.5□□□□□ -0.41
ATG9A-222ENST00000488833 A6NHS1 94 aa12.5□□□□□ -0.41
ATG9A-222ENST00000488833 SRIP30626 198 aa12.5□□□□□ -0.41
ATG9A-222ENST00000488833 ACOT6Q3I5F7 207 aaPredicted RBP12.5□□□□□ -0.41
ATG9A-222ENST00000488833 FAM74A1Q5RGS3 127 aa12.5□□□□□ -0.41
ATG9A-222ENST00000488833 LYPD5Q6UWN5 251 aa12.5□□□□□ -0.41
ATG9A-222ENST00000488833 OR10G4Q8NGN3 311 aa12.5□□□□□ -0.41
ATG9A-222ENST00000488833 PCNPQ8WW12 178 aaKnown RBP12.5□□□□□ -0.41
ATG9A-222ENST00000488833 TMED6Q8WW62 240 aa12.5□□□□□ -0.41
ATG9A-222ENST00000488833 WFDC1Q9HC57 220 aa12.5□□□□□ -0.41
ATG9A-222ENST00000488833 RAB2AP61019 212 aa12.49□□□□□ -0.41
ATG9A-222ENST00000488833 GOLT1AQ6ZVE7 132 aa12.49□□□□□ -0.41
ATG9A-222ENST00000488833 RASL10AQ92737 203 aa12.49□□□□□ -0.41
ATG9A-222ENST00000488833 A0A1W2PPV4 95 aa12.48□□□□□ -0.41
ATG9A-222ENST00000488833 K7EQD1 137 aa12.48□□□□□ -0.41
ATG9A-222ENST00000488833 GYPEP15421 78 aa12.48□□□□□ -0.41
ATG9A-222ENST00000488833 PQLC2Q6ZP29 291 aa12.48□□□□□ -0.41
ATG9A-222ENST00000488833 Q8N1X5 172 aa12.48□□□□□ -0.41
ATG9A-222ENST00000488833 F6UZH7 168 aa12.47□□□□□ -0.41
ATG9A-222ENST00000488833 EREGO14944 169 aa12.47□□□□□ -0.41
ATG9A-222ENST00000488833 ERVFC1-1P60608 527 aa12.47□□□□□ -0.41
ATG9A-222ENST00000488833 IQCF2Q8IXL9 164 aa12.47□□□□□ -0.41
ATG9A-222ENST00000488833 TNFRSF18Q9Y5U5 241 aa12.47□□□□□ -0.41
ATG9A-222ENST00000488833 LY96Q9Y6Y9 160 aa12.47□□□□□ -0.41
ATG9A-222ENST00000488833 TRAV8-1A0A0A6YYK1 113 aa12.46□□□□□ -0.41
ATG9A-222ENST00000488833 TRAV4A0A0B4J268 109 aa12.46□□□□□ -0.41
ATG9A-222ENST00000488833 TRAV21A0A0B4J279 112 aa12.46□□□□□ -0.41
ATG9A-222ENST00000488833 HMGB3O15347 200 aaKnown RBP12.46□□□□□ -0.41
ATG9A-222ENST00000488833 ORM1P02763 201 aa12.46□□□□□ -0.41
ATG9A-222ENST00000488833 GNG5P63218 68 aa12.46□□□□□ -0.41
ATG9A-222ENST00000488833 TDRG1Q3Y452 100 aa12.46□□□□□ -0.41
ATG9A-222ENST00000488833 SCRT2Q9NQ03 307 aa12.46□□□□□ -0.41
ATG9A-222ENST00000488833 TRAV9-2A0A087WT02 112 aa12.45□□□□□ -0.42
ATG9A-222ENST00000488833 IGHV3-16A0A0C4DH30 117 aa12.45□□□□□ -0.42
ATG9A-222ENST00000488833 M0R2P5 195 aa12.45□□□□□ -0.42
ATG9A-222ENST00000488833 GNRH2O43555 120 aa12.45□□□□□ -0.42
ATG9A-222ENST00000488833 NFE4Q86UQ8 179 aa12.45□□□□□ -0.42
ATG9A-222ENST00000488833 WFDC10BQ8IUB3 73 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms