RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 AKR1C3P42330 323 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 PPT1P50897 306 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 PMS2P11Q13670 270 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 IL17DQ8TAD2 202 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 MUC7Q8TAX7 377 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 PCNPQ8WW12 178 aaKnown RBP7.94□□□□□ -1.14
UBE4B-210ENST00000488228 HIST1H2BAQ96A08 127 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 C20orf144Q9BQM9 153 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 TREM1Q9NP99 234 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 PSG8Q9UQ74 426 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 SMIM9A6NGZ8 99 aa7.93□□□□□ -1.14
UBE4B-210ENST00000488228 IFNA1P01562 189 aa7.93□□□□□ -1.14
UBE4B-210ENST00000488228 NMBP08949 121 aa7.93□□□□□ -1.14
UBE4B-210ENST00000488228 BCL2P10415 239 aa7.93□□□□□ -1.14
UBE4B-210ENST00000488228 TAS2R60P59551 318 aa7.93□□□□□ -1.14
UBE4B-210ENST00000488228 NANOS2P60321 138 aaKnown RBP7.93□□□□□ -1.14
UBE4B-210ENST00000488228 ZFAND6Q6FIF0 208 aa7.93□□□□□ -1.14
UBE4B-210ENST00000488228 ZNF767PQ75MW2 155 aa7.93□□□□□ -1.14
UBE4B-210ENST00000488228 TCEAL7Q9BRU2 100 aa7.93□□□□□ -1.14
UBE4B-210ENST00000488228 NDFIP1Q9BT67 221 aa7.93□□□□□ -1.14
UBE4B-210ENST00000488228 LENEPQ9Y5L5 61 aa7.93□□□□□ -1.14
UBE4B-210ENST00000488228 PLAC8L1A1L4L8 177 aa7.92□□□□□ -1.14
UBE4B-210ENST00000488228 ZNF324O75467 553 aaPredicted RBP7.92□□□□□ -1.14
UBE4B-210ENST00000488228 UBE2G1P62253 170 aa7.92□□□□□ -1.14
UBE4B-210ENST00000488228 BLOC1S1P78537 153 aa7.92□□□□□ -1.14
UBE4B-210ENST00000488228 MUC21Q5SSG8 566 aa7.92□□□□□ -1.14
UBE4B-210ENST00000488228 TEX261Q6UWH6 196 aa7.92□□□□□ -1.14
UBE4B-210ENST00000488228 RNASE8Q8TDE3 154 aaKnown RBP7.92□□□□□ -1.14
UBE4B-210ENST00000488228 C2CD4CQ8TF44 421 aa7.92□□□□□ -1.14
UBE4B-210ENST00000488228 NAGKQ9UJ70 344 aa7.92□□□□□ -1.14
UBE4B-210ENST00000488228 RGS13O14921 159 aa7.91□□□□□ -1.14
UBE4B-210ENST00000488228 GCGP01275 180 aa7.91□□□□□ -1.14
UBE4B-210ENST00000488228 ZNF80P51504 273 aaPredicted RBP7.91□□□□□ -1.14
UBE4B-210ENST00000488228 MEF2BQ02080 365 aaPredicted RBP7.91□□□□□ -1.14
UBE4B-210ENST00000488228 FAM222AQ5U5X8 452 aa7.91□□□□□ -1.14
UBE4B-210ENST00000488228 Q6AWC8 147 aa7.91□□□□□ -1.14
UBE4B-210ENST00000488228 NHLRC2Q8NBF2 726 aa7.91□□□□□ -1.14
UBE4B-210ENST00000488228 ZNF680Q8NEM1 530 aa7.91□□□□□ -1.14
UBE4B-210ENST00000488228 C11orf45Q8TAV5 145 aa7.91□□□□□ -1.14
UBE4B-210ENST00000488228 TMEM263Q8WUH6 116 aaKnown RBP7.91□□□□□ -1.14
UBE4B-210ENST00000488228 C16orf74Q96GX8 76 aa7.91□□□□□ -1.14
UBE4B-210ENST00000488228 FMC1Q96HJ9 113 aa7.91□□□□□ -1.14
UBE4B-210ENST00000488228 PYGO2Q9BRQ0 406 aa7.91□□□□□ -1.14
UBE4B-210ENST00000488228 DERL1Q9BUN8 251 aa7.91□□□□□ -1.14
UBE4B-210ENST00000488228 TP53TG3Q9ULZ0 132 aa7.91□□□□□ -1.14
UBE4B-210ENST00000488228 IGHV1OR15-1A0A075B7D0 117 aa7.9□□□□□ -1.14
UBE4B-210ENST00000488228 TMEM189A5PLL7 270 aa7.9□□□□□ -1.14
UBE4B-210ENST00000488228 CXorf65A6NEN9 183 aa7.9□□□□□ -1.14
UBE4B-210ENST00000488228 FBLL1A6NHQ2 334 aaKnown RBP7.9□□□□□ -1.14
UBE4B-210ENST00000488228 CBY3A6NI87 242 aa7.9□□□□□ -1.14
UBE4B-210ENST00000488228 TMEM183BQ1AE95 376 aa7.9□□□□□ -1.14
UBE4B-210ENST00000488228 EIF4E3Q8N5X7 224 aaKnown RBP7.9□□□□□ -1.14
UBE4B-210ENST00000488228 LYPD6BQ8NI32 183 aa7.9□□□□□ -1.14
UBE4B-210ENST00000488228 C11orf52Q96A22 123 aa7.9□□□□□ -1.14
UBE4B-210ENST00000488228 ZC2HC1AQ96GY0 325 aa7.9□□□□□ -1.14
UBE4B-210ENST00000488228 DKK2Q9UBU2 259 aa7.9□□□□□ -1.14
UBE4B-210ENST00000488228 KLF12Q9Y4X4 402 aa7.9□□□□□ -1.14
UBE4B-210ENST00000488228 PLECQ15149 4684 aaKnown RBP7.9□□□□□ -1.15
UBE4B-210ENST00000488228 ALMS1Q8TCU4 4167 aa7.89□□□□□ -1.15
UBE4B-210ENST00000488228 LTAP01374 205 aa7.89□□□□□ -1.15
UBE4B-210ENST00000488228 RPL35P42766 123 aaKnown RBP7.89□□□□□ -1.15
UBE4B-210ENST00000488228 SMUG1Q53HV7 270 aa7.89□□□□□ -1.15
UBE4B-210ENST00000488228 TOR2AQ5JU69 321 aa7.89□□□□□ -1.15
UBE4B-210ENST00000488228 SAPCD1Q5SSQ6 148 aa7.89□□□□□ -1.15
UBE4B-210ENST00000488228 Q6ZTC4 211 aa7.89□□□□□ -1.15
UBE4B-210ENST00000488228 C11orf72Q8NBR9 251 aa7.89□□□□□ -1.15
UBE4B-210ENST00000488228 FAM210AQ96ND0 272 aa7.89□□□□□ -1.15
UBE4B-210ENST00000488228 LINC00467Q9BRT7 94 aa7.89□□□□□ -1.15
UBE4B-210ENST00000488228 C11orf21Q9P2W6 132 aa7.89□□□□□ -1.15
UBE4B-210ENST00000488228 VAX2Q9UIW0 290 aa7.89□□□□□ -1.15
UBE4B-210ENST00000488228 TRAV21A0A0B4J279 112 aa7.88□□□□□ -1.15
UBE4B-210ENST00000488228 TRBV6-1A0A0K0K1D8 114 aa7.88□□□□□ -1.15
UBE4B-210ENST00000488228 PFN1P07737 140 aaKnown RBP7.88□□□□□ -1.15
UBE4B-210ENST00000488228 C12orf74Q32Q52 190 aa7.88□□□□□ -1.15
UBE4B-210ENST00000488228 ANXA2RQ3ZCQ2 193 aa7.88□□□□□ -1.15
UBE4B-210ENST00000488228 ZNF493Q6ZR52 646 aa7.88□□□□□ -1.15
UBE4B-210ENST00000488228 TMEM183AQ8IXX5 376 aa7.88□□□□□ -1.15
UBE4B-210ENST00000488228 TXNDC17Q9BRA2 123 aa7.88□□□□□ -1.15
UBE4B-210ENST00000488228 NOP10Q9NPE3 64 aaKnown RBP7.88□□□□□ -1.15
UBE4B-210ENST00000488228 GSN-AS1Q9NRJ2 163 aa7.88□□□□□ -1.15
UBE4B-210ENST00000488228 NACAE9PAV3 2078 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 RBFOX3A6NFN3 312 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 SNURFLB1AK76 121 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 C3orf84H3BNL1 204 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 PDE6DO43924 150 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 SH2D1AO60880 128 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 TYMSP04818 313 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 SPART-AS1P0CW21 52 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 TAGLN2P37802 199 aaKnown RBP7.87□□□□□ -1.15
UBE4B-210ENST00000488228 CENPWQ5EE01 88 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 ZNF506Q5JVG8 444 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 CASC10Q5T4H9 136 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 FAM159AQ6UWV7 190 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 ZFP30Q9Y2G7 519 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 TMA7Q9Y2S6 64 aaKnown RBP7.87□□□□□ -1.15
UBE4B-210ENST00000488228 MUC4Q99102 2169 aa7.87□□□□□ -1.15
UBE4B-210ENST00000488228 TEX48A0A1B0GUV7 120 aa7.86□□□□□ -1.15
UBE4B-210ENST00000488228 RAB19A4D1S5 217 aa7.86□□□□□ -1.15
UBE4B-210ENST00000488228 LYRM9A8MSI8 78 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 263.8 ms