RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 AAMDCQ9H7C9 122 aa8.39□□□□□ -1.07
VPS16-208ENST00000487461 H0YIZ8 118 aa8.38□□□□□ -1.07
VPS16-208ENST00000487461 NMBP08949 121 aa8.38□□□□□ -1.07
VPS16-208ENST00000487461 GIPP09681 153 aaPredicted RBP8.38□□□□□ -1.07
VPS16-208ENST00000487461 TCL1AP56279 114 aa8.38□□□□□ -1.07
VPS16-208ENST00000487461 OR51M1Q9H341 326 aa8.38□□□□□ -1.07
VPS16-208ENST00000487461 OR5AC2Q9NZP5 309 aa8.38□□□□□ -1.07
VPS16-208ENST00000487461 ZNF492Q9P255 531 aa8.38□□□□□ -1.07
VPS16-208ENST00000487461 HSPB11Q9Y547 144 aa8.38□□□□□ -1.07
VPS16-208ENST00000487461 IGHV1OR15-1A0A075B7D0 117 aa8.37□□□□□ -1.07
VPS16-208ENST00000487461 E5RGE8 158 aa8.37□□□□□ -1.07
VPS16-208ENST00000487461 SSNA1O43805 119 aa8.37□□□□□ -1.07
VPS16-208ENST00000487461 IGHV3-53P01767 116 aa8.37□□□□□ -1.07
VPS16-208ENST00000487461 OR10J4P0C629 311 aa8.37□□□□□ -1.07
VPS16-208ENST00000487461 BTF3P20290 206 aaKnown RBP8.37□□□□□ -1.07
VPS16-208ENST00000487461 IBA57Q5T440 356 aaKnown RBP8.37□□□□□ -1.07
VPS16-208ENST00000487461 TMEM78Q5T7P6 136 aa8.37□□□□□ -1.07
VPS16-208ENST00000487461 FXYD5Q96DB9 178 aa8.37□□□□□ -1.07
VPS16-208ENST00000487461 PAXXQ9BUH6 204 aa8.37□□□□□ -1.07
VPS16-208ENST00000487461 SLC25A31Q9H0C2 315 aa8.37□□□□□ -1.07
VPS16-208ENST00000487461 MRPL16Q9NX20 251 aaKnown RBP8.37□□□□□ -1.07
VPS16-208ENST00000487461 DNAH5Q8TE73 4624 aa8.37□□□□□ -1.07
VPS16-208ENST00000487461 LINC00862A6NCI5 91 aa8.36□□□□□ -1.07
VPS16-208ENST00000487461 PAX4O43316 350 aa8.36□□□□□ -1.07
VPS16-208ENST00000487461 ZNF138P52744 262 aa8.36□□□□□ -1.07
VPS16-208ENST00000487461 LINC00315P59091 139 aa8.36□□□□□ -1.07
VPS16-208ENST00000487461 LRRC37A5PQ49AS3 106 aa8.36□□□□□ -1.07
VPS16-208ENST00000487461 PHYHIPLQ96FC7 376 aa8.36□□□□□ -1.07
VPS16-208ENST00000487461 NMES1Q9C002 83 aa8.36□□□□□ -1.07
VPS16-208ENST00000487461 WDR61Q9GZS3 305 aaKnown RBP8.36□□□□□ -1.07
VPS16-208ENST00000487461 HMSDA8MTL9 139 aa8.35□□□□□ -1.07
VPS16-208ENST00000487461 SIVA1O15304 175 aa8.35□□□□□ -1.07
VPS16-208ENST00000487461 FHL2Q14192 279 aa8.35□□□□□ -1.07
VPS16-208ENST00000487461 LGALSLQ3ZCW2 172 aaPredicted RBP8.35□□□□□ -1.07
VPS16-208ENST00000487461 TEX261Q6UWH6 196 aa8.35□□□□□ -1.07
VPS16-208ENST00000487461 Q6ZRN7 208 aaPredicted RBP8.35□□□□□ -1.07
VPS16-208ENST00000487461 Q8N1X5 172 aa8.35□□□□□ -1.07
VPS16-208ENST00000487461 OR11H4Q8NGC9 324 aa8.35□□□□□ -1.07
VPS16-208ENST00000487461 Q8TAT8 98 aa8.35□□□□□ -1.07
VPS16-208ENST00000487461 HHLA3Q9XRX5 114 aa8.35□□□□□ -1.07
VPS16-208ENST00000487461 ICOSQ9Y6W8 199 aa8.35□□□□□ -1.07
VPS16-208ENST00000487461 TRBV7-9A0A0J9YWB2 115 aa8.34□□□□□ -1.07
VPS16-208ENST00000487461 SMLR1H3BR10 107 aa8.34□□□□□ -1.07
VPS16-208ENST00000487461 NXPH4O95158 308 aa8.34□□□□□ -1.07
VPS16-208ENST00000487461 IFNA7P01567 189 aa8.34□□□□□ -1.07
VPS16-208ENST00000487461 CRYBA4P53673 196 aa8.34□□□□□ -1.07
VPS16-208ENST00000487461 RANP62826 216 aaKnown RBP8.34□□□□□ -1.07
VPS16-208ENST00000487461 LYPD5Q6UWN5 251 aa8.34□□□□□ -1.07
VPS16-208ENST00000487461 C8orf49Q96NF6 230 aa8.34□□□□□ -1.07
VPS16-208ENST00000487461 ARPC5LQ9BPX5 153 aa8.34□□□□□ -1.07
VPS16-208ENST00000487461 MRPL32Q9BYC8 188 aaKnown RBP8.34□□□□□ -1.07
VPS16-208ENST00000487461 SCRT2Q9NQ03 307 aa8.34□□□□□ -1.07
VPS16-208ENST00000487461 MDFICQ9P1T7 246 aa8.34□□□□□ -1.07
VPS16-208ENST00000487461 PRO0255Q9UI72 69 aa8.34□□□□□ -1.07
VPS16-208ENST00000487461 TNFRSF18Q9Y5U5 241 aa8.34□□□□□ -1.07
VPS16-208ENST00000487461 APOBP04114 4563 aaKnown RBP8.34□□□□□ -1.07
VPS16-208ENST00000487461 RBAKDNA6NC62 111 aa8.33□□□□□ -1.08
VPS16-208ENST00000487461 G3V3Q6 166 aa8.33□□□□□ -1.08
VPS16-208ENST00000487461 OR7C2O60412 319 aa8.33□□□□□ -1.08
VPS16-208ENST00000487461 CSN1S1P47710 185 aa8.33□□□□□ -1.08
VPS16-208ENST00000487461 CYCSP99999 105 aaKnown RBP8.33□□□□□ -1.08
VPS16-208ENST00000487461 SLAQ13239 276 aa8.33□□□□□ -1.08
VPS16-208ENST00000487461 ZNF266Q14584 549 aa8.33□□□□□ -1.08
VPS16-208ENST00000487461 MUC21Q5SSG8 566 aa8.33□□□□□ -1.08
VPS16-208ENST00000487461 OR2T35Q8NGX2 323 aa8.33□□□□□ -1.08
VPS16-208ENST00000487461 KCNIP2Q9NS61 270 aa8.33□□□□□ -1.08
VPS16-208ENST00000487461 C17orf112F2Z3M2 114 aa8.32□□□□□ -1.08
VPS16-208ENST00000487461 FUSP35637 526 aaKnown RBP eCLIP8.32□□□□□ -1.08
VPS16-208ENST00000487461 H2BFSP57053 126 aa8.32□□□□□ -1.08
VPS16-208ENST00000487461 ZNF415Q09FC8 603 aa8.32□□□□□ -1.08
VPS16-208ENST00000487461 MRPL23Q16540 153 aaKnown RBP8.32□□□□□ -1.08
VPS16-208ENST00000487461 CLLU1Q5K131 121 aa8.32□□□□□ -1.08
VPS16-208ENST00000487461 LYPD1Q8N2G4 141 aa8.32□□□□□ -1.08
VPS16-208ENST00000487461 DIRC3C9JPN6 131 aa8.31□□□□□ -1.08
VPS16-208ENST00000487461 EIF3GO75821 320 aaKnown RBP eCLIP8.31□□□□□ -1.08
VPS16-208ENST00000487461 SFTA3P0C7M3 94 aa8.31□□□□□ -1.08
VPS16-208ENST00000487461 FFAR4Q5NUL3 377 aa8.31□□□□□ -1.08
VPS16-208ENST00000487461 Q6AWC8 147 aa8.31□□□□□ -1.08
VPS16-208ENST00000487461 IQCF2Q8IXL9 164 aa8.31□□□□□ -1.08
VPS16-208ENST00000487461 PPP1R1CQ8WVI7 109 aa8.31□□□□□ -1.08
VPS16-208ENST00000487461 ZNF479Q96JC4 524 aa8.31□□□□□ -1.08
VPS16-208ENST00000487461 ATP5SQ99766 215 aa8.31□□□□□ -1.08
VPS16-208ENST00000487461 MED9Q9NWA0 146 aa8.31□□□□□ -1.08
VPS16-208ENST00000487461 TRGV4A0A0C4DH28 118 aa8.3□□□□□ -1.08
VPS16-208ENST00000487461 UBE2L3P68036 154 aaKnown RBP8.3□□□□□ -1.08
VPS16-208ENST00000487461 TMEM183BQ1AE95 376 aa8.3□□□□□ -1.08
VPS16-208ENST00000487461 NEGR1Q7Z3B1 354 aa8.3□□□□□ -1.08
VPS16-208ENST00000487461 TMEM183AQ8IXX5 376 aa8.3□□□□□ -1.08
VPS16-208ENST00000487461 RASL10AQ92737 203 aa8.3□□□□□ -1.08
VPS16-208ENST00000487461 SMIM3Q9BZL3 60 aa8.3□□□□□ -1.08
VPS16-208ENST00000487461 PGPEP1Q9NXJ5 209 aa8.3□□□□□ -1.08
VPS16-208ENST00000487461 LENEPQ9Y5L5 61 aa8.3□□□□□ -1.08
VPS16-208ENST00000487461 PGPA6NDG6 321 aa8.29□□□□□ -1.08
VPS16-208ENST00000487461 K7EQD1 137 aa8.29□□□□□ -1.08
VPS16-208ENST00000487461 GNRH2O43555 120 aa8.29□□□□□ -1.08
VPS16-208ENST00000487461 MPC2O95563 127 aa8.29□□□□□ -1.08
VPS16-208ENST00000487461 RAB14P61106 215 aa8.29□□□□□ -1.08
VPS16-208ENST00000487461 OR10G4Q8NGN3 311 aa8.29□□□□□ -1.08
VPS16-208ENST00000487461 SCGB1C1Q8TD33 95 aa8.29□□□□□ -1.08
VPS16-208ENST00000487461 SPXQ9BT56 116 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms