RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 CRYBG3Q68DQ2 2970 aa9.76□□□□□ -0.85
SHROOM3-208ENST00000486758 UNC79Q9P2D8 2635 aa9.75□□□□□ -0.85
SHROOM3-208ENST00000486758 HAX1O00165 279 aa9.75□□□□□ -0.85
SHROOM3-208ENST00000486758 LY6EQ16553 131 aa9.75□□□□□ -0.85
SHROOM3-208ENST00000486758 ZNF833PQ6ZTB9 187 aa9.75□□□□□ -0.85
SHROOM3-208ENST00000486758 TMEM158Q8WZ71 300 aa9.75□□□□□ -0.85
SHROOM3-208ENST00000486758 IGKCP01834 107 aa9.75□□□□□ -0.85
SHROOM3-208ENST00000486758 HLA-DMBP28068 263 aa9.75□□□□□ -0.85
SHROOM3-208ENST00000486758 TRAV26-2A0A0B4J265 109 aa9.75□□□□□ -0.85
SHROOM3-208ENST00000486758 PSMB2P49721 201 aa9.75□□□□□ -0.85
SHROOM3-208ENST00000486758 EMP1P54849 157 aa9.75□□□□□ -0.85
SHROOM3-208ENST00000486758 TRGV9Q99603 122 aa9.75□□□□□ -0.85
SHROOM3-208ENST00000486758 VKORC1Q9BQB6 163 aa9.75□□□□□ -0.85
SHROOM3-208ENST00000486758 G3V4G9 280 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 BUB1B-PAK6H3BSN5 160 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 CKS1BP61024 79 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 Q1RN00 199 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 ZNF48Q96MX3 618 aaPredicted RBP9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 M0R381 172 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 TMEM155Q4W5P6 130 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 NUP37Q8NFH4 326 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 OR11H12B2RN74 326 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 NPIPB6E9PJ23 425 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 CGB3P0DN86 165 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 CGB7P0DN87 165 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 GP9P14770 177 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 ATP5G2Q06055 141 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 POU2AF1Q16633 256 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 FAM104BQ5XKR9 115 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 OR11H1Q8NG94 326 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 OR11H2Q8NH07 326 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 ZNF492Q9P255 531 aa9.74□□□□□ -0.85
SHROOM3-208ENST00000486758 ERCC8Q13216 396 aa9.73□□□□□ -0.85
SHROOM3-208ENST00000486758 GAGE13Q4V321 117 aa9.73□□□□□ -0.85
SHROOM3-208ENST00000486758 IGFL3Q6UXB1 125 aa9.73□□□□□ -0.85
SHROOM3-208ENST00000486758 TMEM219Q86XT9 240 aa9.73□□□□□ -0.85
SHROOM3-208ENST00000486758 CT83Q5H943 113 aa9.73□□□□□ -0.85
SHROOM3-208ENST00000486758 SRSF8Q9BRL6 282 aaKnown RBP9.73□□□□□ -0.85
SHROOM3-208ENST00000486758 GFRA4Q9GZZ7 299 aa9.73□□□□□ -0.85
SHROOM3-208ENST00000486758 GAGE12HA6NDE8 117 aa9.73□□□□□ -0.85
SHROOM3-208ENST00000486758 DPM2O94777 84 aa9.73□□□□□ -0.85
SHROOM3-208ENST00000486758 TEX36Q5VZQ5 186 aa9.73□□□□□ -0.85
SHROOM3-208ENST00000486758 JMJD1CQ15652 2540 aa9.72□□□□□ -0.85
SHROOM3-208ENST00000486758 NBR2O15453 112 aa9.72□□□□□ -0.85
SHROOM3-208ENST00000486758 MFAP4P55083 255 aa9.72□□□□□ -0.85
SHROOM3-208ENST00000486758 ZNF843Q8N446 348 aa9.72□□□□□ -0.85
SHROOM3-208ENST00000486758 C19orf71A6NCJ1 209 aa9.72□□□□□ -0.85
SHROOM3-208ENST00000486758 EFNA4P52798 201 aa9.72□□□□□ -0.85
SHROOM3-208ENST00000486758 TRBV19A0A075B6N1 114 aa9.72□□□□□ -0.85
SHROOM3-208ENST00000486758 F5H697 171 aa9.72□□□□□ -0.85
SHROOM3-208ENST00000486758 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.72□□□□□ -0.85
SHROOM3-208ENST00000486758 MLST8Q9BVC4 326 aa9.72□□□□□ -0.85
SHROOM3-208ENST00000486758 C21orf62Q9NYP8 219 aa9.72□□□□□ -0.85
SHROOM3-208ENST00000486758 SHISA9B4DS77 424 aa9.71□□□□□ -0.85
SHROOM3-208ENST00000486758 RAB9AP51151 201 aa9.71□□□□□ -0.85
SHROOM3-208ENST00000486758 BEX4Q9NWD9 120 aaPredicted RBP9.71□□□□□ -0.85
SHROOM3-208ENST00000486758 IGKV2D-26A0A0A0MRZ7 120 aa9.71□□□□□ -0.85
SHROOM3-208ENST00000486758 CRXO43186 299 aaPredicted RBP9.71□□□□□ -0.85
SHROOM3-208ENST00000486758 LGALS9BQ3B8N2 356 aa9.71□□□□□ -0.85
SHROOM3-208ENST00000486758 C3orf36Q3SXR2 165 aa9.71□□□□□ -0.85
SHROOM3-208ENST00000486758 LGALS9CQ6DKI2 356 aa9.71□□□□□ -0.85
SHROOM3-208ENST00000486758 VGLL1Q99990 258 aa9.71□□□□□ -0.85
SHROOM3-208ENST00000486758 MRPL35Q9NZE8 188 aaKnown RBP9.71□□□□□ -0.85
SHROOM3-208ENST00000486758 IGHV3-11P01762 117 aa9.71□□□□□ -0.86
SHROOM3-208ENST00000486758 ODF1Q14990 250 aa9.71□□□□□ -0.86
SHROOM3-208ENST00000486758 TMEM30BQ3MIR4 351 aa9.71□□□□□ -0.86
SHROOM3-208ENST00000486758 Q6AWC8 147 aa9.71□□□□□ -0.86
SHROOM3-208ENST00000486758 CLEC19AQ6UXS0 136 aa9.71□□□□□ -0.86
SHROOM3-208ENST00000486758 RNF182Q8N6D2 247 aa9.71□□□□□ -0.86
SHROOM3-208ENST00000486758 PRSS22Q9GZN4 317 aa9.71□□□□□ -0.86
SHROOM3-208ENST00000486758 TNRC6BQ9UPQ9 1833 aaKnown RBP9.71□□□□□ -0.86
SHROOM3-208ENST00000486758 PSMB11A5LHX3 300 aa9.7□□□□□ -0.86
SHROOM3-208ENST00000486758 Q8NA96 180 aa9.7□□□□□ -0.86
SHROOM3-208ENST00000486758 BOD1L2Q8IYS8 172 aa9.7□□□□□ -0.86
SHROOM3-208ENST00000486758 GCN1Q92616 2671 aaKnown RBP9.7□□□□□ -0.86
SHROOM3-208ENST00000486758 TRBV25-1A0A075B6N4 114 aa9.7□□□□□ -0.86
SHROOM3-208ENST00000486758 K7ENP7 123 aa9.7□□□□□ -0.86
SHROOM3-208ENST00000486758 CEACAM4O75871 244 aa9.7□□□□□ -0.86
SHROOM3-208ENST00000486758 TNFRSF6BO95407 300 aa9.7□□□□□ -0.86
SHROOM3-208ENST00000486758 SMIM17P0DL12 118 aa9.7□□□□□ -0.86
SHROOM3-208ENST00000486758 PLA2G2AP14555 144 aa9.7□□□□□ -0.86
SHROOM3-208ENST00000486758 THAP8Q8NA92 274 aa9.7□□□□□ -0.86
SHROOM3-208ENST00000486758 EGR2P11161 476 aaPredicted RBP9.69□□□□□ -0.86
SHROOM3-208ENST00000486758 HTN1P15515 57 aa9.69□□□□□ -0.86
SHROOM3-208ENST00000486758 KLF12Q9Y4X4 402 aa9.69□□□□□ -0.86
SHROOM3-208ENST00000486758 NDPQ00604 133 aa9.69□□□□□ -0.86
SHROOM3-208ENST00000486758 PGPEP1Q9NXJ5 209 aa9.69□□□□□ -0.86
SHROOM3-208ENST00000486758 GAS8-AS1O95177 125 aa9.69□□□□□ -0.86
SHROOM3-208ENST00000486758 CD300EQ496F6 205 aaPredicted RBP9.69□□□□□ -0.86
SHROOM3-208ENST00000486758 SHISA2Q6UWI4 295 aa9.69□□□□□ -0.86
SHROOM3-208ENST00000486758 BRD3OSQ6XYD6 125 aa9.69□□□□□ -0.86
SHROOM3-208ENST00000486758 AGRNO00468 2067 aa9.69□□□□□ -0.86
SHROOM3-208ENST00000486758 TRAV26-1A0A087WT03 109 aa9.68□□□□□ -0.86
SHROOM3-208ENST00000486758 A0A1B0GW15 77 aa9.68□□□□□ -0.86
SHROOM3-208ENST00000486758 GLMPQ8WWB7 406 aa9.68□□□□□ -0.86
SHROOM3-208ENST00000486758 SCGB3A1Q96QR1 104 aa9.68□□□□□ -0.86
SHROOM3-208ENST00000486758 CRYBA4P53673 196 aa9.68□□□□□ -0.86
SHROOM3-208ENST00000486758 TMEM78Q5T7P6 136 aa9.68□□□□□ -0.86
SHROOM3-208ENST00000486758 RPS20P60866 119 aaKnown RBP9.68□□□□□ -0.86
SHROOM3-208ENST00000486758 ANXA2RQ3ZCQ2 193 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms