RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 E7EQ34 232 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 H3BMG7 143 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 M0QZK8 103 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 LY6G6CO95867 125 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 SLC25A4P12235 298 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 CRYGSP22914 178 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 RPS3P23396 243 aaKnown RBP eCLIP0.18□□□□□ -2.38
LTN1-206ENST00000486427 KDELR1P24390 212 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 C10orf99Q6UWK7 81 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 IZUMO2Q6UXV1 221 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 MORN4Q8NDC4 146 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 CIB3Q96Q77 187 aaPredicted RBP0.18□□□□□ -2.38
LTN1-206ENST00000486427 COMMD3Q9UBI1 195 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 AFDNP55196 1824 aaKnown RBP0.17□□□□□ -2.38
LTN1-206ENST00000486427 A0A1B0GV72 72 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 LOC107986453A0A1B0GWG9 222 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 A0A1W2PPB8 328 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 A0A1W2PRS3 328 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 BBIP1A8MTZ0 92 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 KIR3DP1A8MWS1 328 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 PGRMC1O00264 195 aaKnown RBP0.17□□□□□ -2.38
LTN1-206ENST00000486427 CDC42EP2O14613 210 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 SULT1C4O75897 302 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 IFNA21P01568 189 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 IGKCP01834 107 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 SAA1P0DJI8 122 aaPredicted RBP0.17□□□□□ -2.38
LTN1-206ENST00000486427 CAV3P56539 151 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 SNRPD3P62318 126 aaKnown RBP0.17□□□□□ -2.38
LTN1-206ENST00000486427 BLCAPP62952 87 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 TMEM128Q5BJH2 165 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 GLYATL3Q5SZD4 288 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 TCTEX1D1Q8N7M0 179 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 TMEM229BQ8NBD8 167 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 OR51A4Q8NGJ6 313 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 BRK1Q8WUW1 75 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 LINC00208Q96KT6 92 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 CCDC115Q96NT0 180 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 LXNQ9BS40 222 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 CENPHQ9H3R5 247 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 MPC1Q9Y5U8 109 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 V9GYQ6 96 aa0.17□□□□□ -2.38
LTN1-206ENST00000486427 TNCP24821 2201 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.16□□□□□ -2.38
LTN1-206ENST00000486427 NBDYA0A0U1RRE5 68 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 LOC101927531A0A1B0GV80 90 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 ARL5CA6NH57 179 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 EDF1O60869 148 aaKnown RBP0.16□□□□□ -2.38
LTN1-206ENST00000486427 PFDN1O60925 122 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 FAM107AO95990 144 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 NEFHP12036 1026 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 TFAMQ00059 246 aaKnown RBP0.16□□□□□ -2.38
LTN1-206ENST00000486427 ZNF56Q15929 161 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 SAMD13Q5VXD3 122 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 XAF1Q6GPH4 301 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 C3orf62Q6ZUJ4 267 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 NAT14Q8WUY8 206 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 AP1S3Q96PC3 154 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 CACNA1EQ15878 2313 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 HELZP42694 1942 aaKnown RBP0.16□□□□□ -2.38
LTN1-206ENST00000486427 A2MP01023 1474 aa0.16□□□□□ -2.38
LTN1-206ENST00000486427 NAV2Q8IVL1 2488 aa0.15□□□□□ -2.38
LTN1-206ENST00000486427 KIDINS220Q9ULH0 1771 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 PRORSD1PA6NEY8 169 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 HBDP02042 147 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 TCRAP04437 139 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 SLC25A5P05141 298 aaKnown RBP0.15□□□□□ -2.39
LTN1-206ENST00000486427 GYPBP06028 91 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 IL7P13232 177 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 EVI2AP22794 236 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 S100GP29377 79 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 RPL22P35268 128 aaKnown RBP0.15□□□□□ -2.39
LTN1-206ENST00000486427 SRP9P49458 86 aaKnown RBP0.15□□□□□ -2.39
LTN1-206ENST00000486427 GTF2A1P52655 376 aaPredicted RBP0.15□□□□□ -2.39
LTN1-206ENST00000486427 DNAJB13P59910 316 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 FXYD3Q14802 87 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 ASB16-AS1Q495Z4 193 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 LYPD5Q6UWN5 251 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 TOMM20LQ6UXN7 152 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 C5orf56Q8N8D9 126 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 OR9Q1Q8NGQ5 310 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 OTOSQ8NHW6 89 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 TSKUQ8WUA8 353 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 MRPL36Q9P0J6 103 aaKnown RBP0.15□□□□□ -2.39
LTN1-206ENST00000486427 NDUFAF1Q9Y375 327 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 WDR97A6NE52 1622 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 LRP5O75197 1615 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 FAT4Q6V0I7 4981 aa0.15□□□□□ -2.39
LTN1-206ENST00000486427 RREB1Q92766 1687 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 SYNE1Q8NF91 8797 aaKnown RBP0.14□□□□□ -2.39
LTN1-206ENST00000486427 DLEC1Q9Y238 1755 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 TMEM30CPA0ZSE6 113 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 TMEM189A5PLL7 270 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 IFITM5A6NNB3 132 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 IQCJQ1A5X6 159 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 CCSMST1Q4G0I0 132 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 Q5XG85 94 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 SMIM15Q7Z3B0 74 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 DEFB132Q7Z7B7 95 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 TMEM35BQ8NCS4 154 aa0.14□□□□□ -2.39
LTN1-206ENST00000486427 OR8J3Q8NGG0 315 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms