RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 CDPF1Q6NVV7 123 aa8.98□□□□□ -0.97
HMG20B-211ENST00000486028 CEMP1Q6PRD7 247 aaPredicted RBP8.98□□□□□ -0.97
HMG20B-211ENST00000486028 PQLC2Q6ZP29 291 aa8.98□□□□□ -0.97
HMG20B-211ENST00000486028 LYPD1Q8N2G4 141 aa8.98□□□□□ -0.97
HMG20B-211ENST00000486028 ZNF503Q96F45 646 aa8.98□□□□□ -0.97
HMG20B-211ENST00000486028 EIF5A2Q9GZV4 153 aaKnown RBP8.98□□□□□ -0.97
HMG20B-211ENST00000486028 NIT2Q9NQR4 276 aa8.98□□□□□ -0.97
HMG20B-211ENST00000486028 TRAV12-2A0A075B6T6 113 aa8.97□□□□□ -0.97
HMG20B-211ENST00000486028 A0A087WWC5 75 aa8.97□□□□□ -0.97
HMG20B-211ENST00000486028 NPIPB6E9PJ23 425 aa8.97□□□□□ -0.97
HMG20B-211ENST00000486028 CRXO43186 299 aaPredicted RBP8.97□□□□□ -0.97
HMG20B-211ENST00000486028 GATCO43716 136 aaKnown RBP8.97□□□□□ -0.97
HMG20B-211ENST00000486028 HOXA5P20719 270 aa8.97□□□□□ -0.97
HMG20B-211ENST00000486028 LEPP41159 167 aa8.97□□□□□ -0.97
HMG20B-211ENST00000486028 CDKN1BP46527 198 aa8.97□□□□□ -0.97
HMG20B-211ENST00000486028 CSN1S1P47710 185 aa8.97□□□□□ -0.97
HMG20B-211ENST00000486028 NANOS2P60321 138 aaKnown RBP8.97□□□□□ -0.97
HMG20B-211ENST00000486028 RANP62826 216 aaKnown RBP8.97□□□□□ -0.97
HMG20B-211ENST00000486028 RRN3P1Q2M238 152 aa8.97□□□□□ -0.97
HMG20B-211ENST00000486028 RPP25LQ8N5L8 163 aaKnown RBP8.97□□□□□ -0.97
HMG20B-211ENST00000486028 PHLDA1Q8WV24 401 aaPredicted RBP8.97□□□□□ -0.97
HMG20B-211ENST00000486028 LINC00477Q96M19 166 aa8.97□□□□□ -0.97
HMG20B-211ENST00000486028 ODF3Q96PU9 254 aa8.97□□□□□ -0.97
HMG20B-211ENST00000486028 SH3BGRL3Q9H299 93 aa8.97□□□□□ -0.97
HMG20B-211ENST00000486028 KLK5Q9Y337 293 aaPredicted RBP8.97□□□□□ -0.97
HMG20B-211ENST00000486028 CT45A10P0DMU9 189 aa8.96□□□□□ -0.98
HMG20B-211ENST00000486028 CDC34P49427 236 aaPredicted RBP8.96□□□□□ -0.98
HMG20B-211ENST00000486028 SOHLH1Q5JUK2 328 aa8.96□□□□□ -0.98
HMG20B-211ENST00000486028 TMEM256Q8N2U0 113 aa8.96□□□□□ -0.98
HMG20B-211ENST00000486028 LINC01587Q99440 93 aa8.96□□□□□ -0.98
HMG20B-211ENST00000486028 ACTR3CQ9C0K3 210 aaPredicted RBP8.96□□□□□ -0.98
HMG20B-211ENST00000486028 Q9H3A6 140 aa8.96□□□□□ -0.98
HMG20B-211ENST00000486028 CSMD3Q7Z407 3707 aa8.96□□□□□ -0.98
HMG20B-211ENST00000486028 LOC102723971A0A1B0GUV8 181 aa8.95□□□□□ -0.98
HMG20B-211ENST00000486028 RBFOX3A6NFN3 312 aa8.95□□□□□ -0.98
HMG20B-211ENST00000486028 HMGB3O15347 200 aaKnown RBP8.95□□□□□ -0.98
HMG20B-211ENST00000486028 SRP19P09132 144 aaKnown RBP8.95□□□□□ -0.98
HMG20B-211ENST00000486028 SPART-AS1P0CW21 52 aa8.95□□□□□ -0.98
HMG20B-211ENST00000486028 EMP1P54849 157 aa8.95□□□□□ -0.98
HMG20B-211ENST00000486028 ERCC8Q13216 396 aa8.95□□□□□ -0.98
HMG20B-211ENST00000486028 DNLZQ5SXM8 178 aa8.95□□□□□ -0.98
HMG20B-211ENST00000486028 DPPA3Q6W0C5 159 aa8.95□□□□□ -0.98
HMG20B-211ENST00000486028 LINC00469Q8N7U9 141 aa8.95□□□□□ -0.98
HMG20B-211ENST00000486028 FAM213BQ8TBF2 198 aa8.95□□□□□ -0.98
HMG20B-211ENST00000486028 RAB24Q969Q5 203 aa8.95□□□□□ -0.98
HMG20B-211ENST00000486028 C20orf144Q9BQM9 153 aa8.95□□□□□ -0.98
HMG20B-211ENST00000486028 AGPAT4-IT1Q9H0P7 198 aa8.95□□□□□ -0.98
HMG20B-211ENST00000486028 IGKV2-40A0A087WW87 121 aaPredicted RBP8.94□□□□□ -0.98
HMG20B-211ENST00000486028 ZNF705GA8MUZ8 300 aaPredicted RBP8.94□□□□□ -0.98
HMG20B-211ENST00000486028 ZNF561-AS1K7EIQ3 104 aa8.94□□□□□ -0.98
HMG20B-211ENST00000486028 IGKV2D-40P01614 121 aaPredicted RBP8.94□□□□□ -0.98
HMG20B-211ENST00000486028 ARL14EPLP0DKL9 152 aa8.94□□□□□ -0.98
HMG20B-211ENST00000486028 TAS2R60P59551 318 aa8.94□□□□□ -0.98
HMG20B-211ENST00000486028 ZNF506Q5JVG8 444 aa8.94□□□□□ -0.98
HMG20B-211ENST00000486028 AKR1C8PQ5T2L2 129 aa8.94□□□□□ -0.98
HMG20B-211ENST00000486028 TMEM78Q5T7P6 136 aa8.94□□□□□ -0.98
HMG20B-211ENST00000486028 C9orf47Q6ZRZ4 202 aa8.94□□□□□ -0.98
HMG20B-211ENST00000486028 ISOC2Q96AB3 205 aa8.94□□□□□ -0.98
HMG20B-211ENST00000486028 OTORQ9NRC9 128 aa8.94□□□□□ -0.98
HMG20B-211ENST00000486028 KMT2CQ8NEZ4 4911 aaKnown RBP8.93□□□□□ -0.98
HMG20B-211ENST00000486028 TEX48A0A1B0GUV7 120 aa8.93□□□□□ -0.98
HMG20B-211ENST00000486028 PGPA6NDG6 321 aa8.93□□□□□ -0.98
HMG20B-211ENST00000486028 C11orf94C9JXX5 98 aa8.93□□□□□ -0.98
HMG20B-211ENST00000486028 H7BYZ3 331 aa8.93□□□□□ -0.98
HMG20B-211ENST00000486028 CXorf1O96002 111 aa8.93□□□□□ -0.98
HMG20B-211ENST00000486028 STAG3L2P0CL84 134 aa8.93□□□□□ -0.98
HMG20B-211ENST00000486028 STAG3L3P0CL85 134 aa8.93□□□□□ -0.98
HMG20B-211ENST00000486028 GFI1BQ5VTD9 330 aa8.93□□□□□ -0.98
HMG20B-211ENST00000486028 CMTM2Q8TAZ6 248 aa8.93□□□□□ -0.98
HMG20B-211ENST00000486028 VGLL1Q99990 258 aa8.93□□□□□ -0.98
HMG20B-211ENST00000486028 STARD9Q9P2P6 4700 aa8.93□□□□□ -0.98
HMG20B-211ENST00000486028 TRAV1-1A0A0B4J248 108 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 RBAKDNA6NC62 111 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 B4DEV8 164 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 FAM229AH3BQW9 127 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 J3KRW8 73 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 SLC25A5P05141 298 aaKnown RBP8.92□□□□□ -0.98
HMG20B-211ENST00000486028 HTN1P15515 57 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 GCHFRP30047 84 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 FHITP49789 147 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 ZNF138P52744 262 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 KIR3DS1Q14943 382 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 C12orf74Q32Q52 190 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 TVP23CQ96ET8 276 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 TMEM167BQ9NRX6 74 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 DKK2Q9UBU2 259 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 CELA1Q9UNI1 258 aa8.92□□□□□ -0.98
HMG20B-211ENST00000486028 YTHDF2Q9Y5A9 579 aaKnown RBP8.92□□□□□ -0.98
HMG20B-211ENST00000486028 TRAV10A0A0B4J240 114 aa8.91□□□□□ -0.98
HMG20B-211ENST00000486028 TRAV12-3A0A0B4J271 114 aa8.91□□□□□ -0.98
HMG20B-211ENST00000486028 LCE6AA0A183 80 aa8.91□□□□□ -0.98
HMG20B-211ENST00000486028 DIRC3C9JPN6 131 aa8.91□□□□□ -0.98
HMG20B-211ENST00000486028 PRM2P04554 102 aa8.91□□□□□ -0.98
HMG20B-211ENST00000486028 TAGLN2P37802 199 aaKnown RBP8.91□□□□□ -0.98
HMG20B-211ENST00000486028 CCL20P78556 96 aa8.91□□□□□ -0.98
HMG20B-211ENST00000486028 FAM222AQ5U5X8 452 aa8.91□□□□□ -0.98
HMG20B-211ENST00000486028 Q6ZTC4 211 aa8.91□□□□□ -0.98
HMG20B-211ENST00000486028 ARL6IP6Q8N6S5 226 aa8.91□□□□□ -0.98
HMG20B-211ENST00000486028 FAM19A4Q96LR4 140 aa8.91□□□□□ -0.98
HMG20B-211ENST00000486028 NIPSNAP3BQ9BS92 247 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms