RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 RPL19P84098 196 aaKnown RBP-0.24□□□□□ -2.45
VPS50-217ENST00000485140 KLKP1Q107X0 134 aa-0.24□□□□□ -2.45
VPS50-217ENST00000485140 Q5XG85 94 aa-0.24□□□□□ -2.45
VPS50-217ENST00000485140 TMED4Q7Z7H5 227 aa-0.24□□□□□ -2.45
VPS50-217ENST00000485140 CLEC2BQ92478 149 aa-0.24□□□□□ -2.45
VPS50-217ENST00000485140 BIN3Q9NQY0 253 aa-0.24□□□□□ -2.45
VPS50-217ENST00000485140 TMEM14BQ9NUH8 114 aa-0.24□□□□□ -2.45
VPS50-217ENST00000485140 MED11Q9P086 117 aa-0.24□□□□□ -2.45
VPS50-217ENST00000485140 F8P00451 2351 aa-0.24□□□□□ -2.45
VPS50-217ENST00000485140 TRAPPC8Q9Y2L5 1435 aa-0.24□□□□□ -2.45
VPS50-217ENST00000485140 ADGBQ8N7X0 1667 aa-0.24□□□□□ -2.45
VPS50-217ENST00000485140 ANK1P16157 1881 aa-0.24□□□□□ -2.45
VPS50-217ENST00000485140 LOC107986453A0A1B0GWG9 222 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 TMEM30CPA0ZSE6 113 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 IFITM5A6NNB3 132 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 CSN2P05814 226 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 MAXP61244 160 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 AP3S1Q92572 193 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 DMAC1Q96GE9 116 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 PRELID3AQ96N28 172 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 OTORQ9NRC9 128 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 STOML2Q9UJZ1 356 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 MPC1Q9Y5U8 109 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 NUBP2Q9Y5Y2 271 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 TRPM7Q96QT4 1865 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 NINQ8N4C6 2090 aa-0.25□□□□□ -2.45
VPS50-217ENST00000485140 ABCA2Q9BZC7 2435 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 A0A096LNT2 108 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 TMEM189A5PLL7 270 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 BCL2P10415 239 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 GLRXP35754 106 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 ETV6P41212 452 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 LSM3P62310 102 aaKnown RBP-0.26□□□□□ -2.45
VPS50-217ENST00000485140 GNG3P63215 75 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 LTC4SQ16873 150 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 IDO2Q6ZQW0 420 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 FAM24BQ8N5W8 94 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 DYDC1Q8WWB3 177 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 PRR15LQ9BU68 103 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 LRTM1Q9HBL6 345 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 MYO7AQ13402 2215 aa-0.26□□□□□ -2.45
VPS50-217ENST00000485140 AFDNP55196 1824 aaKnown RBP-0.27□□□□□ -2.45
VPS50-217ENST00000485140 FGD6Q6ZV73 1430 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.27□□□□□ -2.45
VPS50-217ENST00000485140 A0A0G2JMM0 328 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 MFSD11O43934 449 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 SDC4P31431 198 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 SDC2P34741 201 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 GTF2A1P52655 376 aaPredicted RBP-0.27□□□□□ -2.45
VPS50-217ENST00000485140 COX6A2Q02221 97 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 ESPL1Q14674 2120 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 LYPD5Q6UWN5 251 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 STX19Q8N4C7 294 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 PPP1R1CQ8WVI7 109 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 DSCR8Q96T75 97 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 SMIM7Q9BQ49 75 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 ATG5Q9H1Y0 275 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 LAMTOR2Q9Y2Q5 125 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 MYH2Q9UKX2 1941 aa-0.27□□□□□ -2.45
VPS50-217ENST00000485140 SPAG17Q6Q759 2223 aa-0.28□□□□□ -2.45
VPS50-217ENST00000485140 YTHDC2Q9H6S0 1430 aaKnown RBP-0.28□□□□□ -2.45
VPS50-217ENST00000485140 TRDV1A0A1B0GX56 115 aa-0.28□□□□□ -2.45
VPS50-217ENST00000485140 EDF1O60869 148 aaKnown RBP-0.28□□□□□ -2.45
VPS50-217ENST00000485140 PFDN1O60925 122 aa-0.28□□□□□ -2.45
VPS50-217ENST00000485140 E2F6O75461 281 aa-0.28□□□□□ -2.45
VPS50-217ENST00000485140 MPC1LP0DKB6 136 aa-0.28□□□□□ -2.45
VPS50-217ENST00000485140 SRP9P49458 86 aaKnown RBP-0.28□□□□□ -2.45
VPS50-217ENST00000485140 RHOHQ15669 191 aa-0.28□□□□□ -2.45
VPS50-217ENST00000485140 TAF9BQ9HBM6 251 aa-0.28□□□□□ -2.45
VPS50-217ENST00000485140 COA4Q9NYJ1 87 aa-0.28□□□□□ -2.45
VPS50-217ENST00000485140 COMMD3Q9UBI1 195 aa-0.28□□□□□ -2.45
VPS50-217ENST00000485140 USP54Q70EL1 1684 aa-0.28□□□□□ -2.45
VPS50-217ENST00000485140 DLC1Q96QB1 1528 aa-0.28□□□□□ -2.45
VPS50-217ENST00000485140 TANC1Q9C0D5 1861 aa-0.29□□□□□ -2.46
VPS50-217ENST00000485140 AHCTF1Q8WYP5 2266 aa-0.29□□□□□ -2.46
VPS50-217ENST00000485140 C10orf142B7Z368 130 aa-0.29□□□□□ -2.46
VPS50-217ENST00000485140 F2Z2F3 143 aa-0.29□□□□□ -2.46
VPS50-217ENST00000485140 LINC00305Q7Z4B0 112 aa-0.29□□□□□ -2.46
VPS50-217ENST00000485140 SMIM20Q8N5G0 67 aa-0.29□□□□□ -2.46
VPS50-217ENST00000485140 UFC1Q9Y3C8 167 aa-0.29□□□□□ -2.46
VPS50-217ENST00000485140 CHD9Q3L8U1 2897 aa-0.29□□□□□ -2.46
VPS50-217ENST00000485140 WNK2Q9Y3S1 2297 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 TRBV27A0A0K0K1C4 114 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 GABARAPH6UMI1 98 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 IGKCP01834 107 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 APOC1P02654 83 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 IFITM1P13164 125 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 IL7P13232 177 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 TAS2R41P59536 307 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 IQCJQ1A5X6 159 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 KRTAP6-1Q3LI64 71 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 UNQ5815/PRO19632Q6UWF5 114 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 CARD19Q96LW7 228 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 LXNQ9BS40 222 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 FKBP11Q9NYL4 201 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 CDK12Q9NYV4 1490 aaPredicted RBP-0.3□□□□□ -2.46
VPS50-217ENST00000485140 ABCA1O95477 2261 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.3□□□□□ -2.46
VPS50-217ENST00000485140 TANC2Q9HCD6 1990 aa-0.3□□□□□ -2.46
VPS50-217ENST00000485140 TECPR2O15040 1411 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms