RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 CARD19Q96LW7 228 aa12.1□□□□□ -0.47
RXRA-203ENST00000484822 UBE2E2Q96LR5 201 aa12.09□□□□□ -0.47
RXRA-203ENST00000484822 NDUFS7O75251 213 aa12.09□□□□□ -0.47
RXRA-203ENST00000484822 COA6Q5JTJ3 125 aaKnown RBP12.09□□□□□ -0.47
RXRA-203ENST00000484822 BRD3OSQ6XYD6 125 aa12.09□□□□□ -0.47
RXRA-203ENST00000484822 TRPT1Q86TN4 253 aaKnown RBP12.09□□□□□ -0.47
RXRA-203ENST00000484822 HELZP42694 1942 aaKnown RBP12.09□□□□□ -0.47
RXRA-203ENST00000484822 SDHAF1A6NFY7 115 aa12.09□□□□□ -0.47
RXRA-203ENST00000484822 MSMBP08118 114 aa12.09□□□□□ -0.47
RXRA-203ENST00000484822 PRR25Q96S07 402 aa12.09□□□□□ -0.47
RXRA-203ENST00000484822 YLPM1P49750 1951 aaKnown RBP12.08□□□□□ -0.47
RXRA-203ENST00000484822 TRACP01848 142 aa12.08□□□□□ -0.48
RXRA-203ENST00000484822 HAMPP81172 84 aa12.08□□□□□ -0.48
RXRA-203ENST00000484822 ZC2HC1AQ96GY0 325 aa12.08□□□□□ -0.48
RXRA-203ENST00000484822 ZNF747Q9BV97 191 aa12.08□□□□□ -0.48
RXRA-203ENST00000484822 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.08□□□□□ -0.48
RXRA-203ENST00000484822 GAGE5Q13069 117 aa12.08□□□□□ -0.48
RXRA-203ENST00000484822 GAGE6Q13070 117 aa12.08□□□□□ -0.48
RXRA-203ENST00000484822 OVOL3O00110 214 aa12.08□□□□□ -0.48
RXRA-203ENST00000484822 MRAPQ8TCY5 172 aa12.08□□□□□ -0.48
RXRA-203ENST00000484822 TMEM141Q96I45 108 aa12.08□□□□□ -0.48
RXRA-203ENST00000484822 NDUFA12Q9UI09 145 aa12.08□□□□□ -0.48
RXRA-203ENST00000484822 PCNX1Q96RV3 2341 aa12.07□□□□□ -0.48
RXRA-203ENST00000484822 RNF223E7ERA6 249 aa12.07□□□□□ -0.48
RXRA-203ENST00000484822 H3BUX3 64 aa12.07□□□□□ -0.48
RXRA-203ENST00000484822 PFN2P35080 140 aa12.07□□□□□ -0.48
RXRA-203ENST00000484822 Q96MF0 132 aa12.07□□□□□ -0.48
RXRA-203ENST00000484822 TAL2Q16559 108 aa12.07□□□□□ -0.48
RXRA-203ENST00000484822 SIVA1O15304 175 aa12.07□□□□□ -0.48
RXRA-203ENST00000484822 PCNX2A6NKB5 2137 aa12.07□□□□□ -0.48
RXRA-203ENST00000484822 SMIM20Q8N5G0 67 aa12.07□□□□□ -0.48
RXRA-203ENST00000484822 LY6HO94772 140 aa12.06□□□□□ -0.48
RXRA-203ENST00000484822 CRYBA4P53673 196 aa12.06□□□□□ -0.48
RXRA-203ENST00000484822 PRR30Q53SZ7 412 aaPredicted RBP12.06□□□□□ -0.48
RXRA-203ENST00000484822 IGF2-ASQ6U949 168 aa12.06□□□□□ -0.48
RXRA-203ENST00000484822 SMIM2Q9BVW6 85 aa12.06□□□□□ -0.48
RXRA-203ENST00000484822 TRAV12-1A0A0B4J245 112 aa12.05□□□□□ -0.48
RXRA-203ENST00000484822 NDUFB8O95169 186 aa12.05□□□□□ -0.48
RXRA-203ENST00000484822 WT1-ASQ06250 92 aa12.05□□□□□ -0.48
RXRA-203ENST00000484822 UTF1Q5T230 341 aa12.05□□□□□ -0.48
RXRA-203ENST00000484822 UBL5Q9BZL1 73 aa12.05□□□□□ -0.48
RXRA-203ENST00000484822 TMEM126AQ9H061 195 aa12.05□□□□□ -0.48
RXRA-203ENST00000484822 LMO1P25800 156 aa12.05□□□□□ -0.48
RXRA-203ENST00000484822 MUC6Q6W4X9 2439 aa12.05□□□□□ -0.48
RXRA-203ENST00000484822 ZFHX2Q9C0A1 2572 aaPredicted RBP12.05□□□□□ -0.48
RXRA-203ENST00000484822 J3QQQ9 107 aa12.05□□□□□ -0.48
RXRA-203ENST00000484822 HLA-DMBP28068 263 aa12.05□□□□□ -0.48
RXRA-203ENST00000484822 ANKRD29Q8N6D5 301 aa12.05□□□□□ -0.48
RXRA-203ENST00000484822 PYGO2Q9BRQ0 406 aa12.05□□□□□ -0.48
RXRA-203ENST00000484822 FAM223BA6NKX1 122 aa12.04□□□□□ -0.48
RXRA-203ENST00000484822 FAM223AQ8IWN6 122 aa12.04□□□□□ -0.48
RXRA-203ENST00000484822 FXYD5Q96DB9 178 aa12.04□□□□□ -0.48
RXRA-203ENST00000484822 IGHV3-16A0A0C4DH30 117 aa12.04□□□□□ -0.48
RXRA-203ENST00000484822 KLHL30-AS1Q8NEE0 82 aa12.04□□□□□ -0.48
RXRA-203ENST00000484822 PRO3102Q9H379 93 aa12.04□□□□□ -0.48
RXRA-203ENST00000484822 FAM120AOSQ5T036 256 aa12.04□□□□□ -0.48
RXRA-203ENST00000484822 CHD3Q12873 2000 aaKnown RBP12.03□□□□□ -0.48
RXRA-203ENST00000484822 PSCAO43653 123 aa12.03□□□□□ -0.48
RXRA-203ENST00000484822 RPL35AP18077 110 aaKnown RBP12.03□□□□□ -0.48
RXRA-203ENST00000484822 LINC00173Q6ZV60 143 aa12.03□□□□□ -0.48
RXRA-203ENST00000484822 KLK9Q9UKQ9 250 aa12.03□□□□□ -0.48
RXRA-203ENST00000484822 SPINK13Q1W4C9 94 aa12.03□□□□□ -0.48
RXRA-203ENST00000484822 BPESC1Q9GZL8 116 aa12.03□□□□□ -0.48
RXRA-203ENST00000484822 DAZ1Q9NQZ3 744 aaKnown RBP12.03□□□□□ -0.48
RXRA-203ENST00000484822 PLA2G2EQ9NZK7 142 aa12.03□□□□□ -0.48
RXRA-203ENST00000484822 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
RXRA-203ENST00000484822 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
RXRA-203ENST00000484822 I3L3M4 83 aa12.03□□□□□ -0.48
RXRA-203ENST00000484822 COL8A2P25067 703 aa12.03□□□□□ -0.48
RXRA-203ENST00000484822 DUX4L9Q6RFH8 374 aaPredicted RBP12.03□□□□□ -0.48
RXRA-203ENST00000484822 WDR86Q86TI4 376 aa12.02□□□□□ -0.48
RXRA-203ENST00000484822 SYNJ2BPP57105 145 aa12.02□□□□□ -0.49
RXRA-203ENST00000484822 TPSG1Q9NRR2 321 aa12.02□□□□□ -0.49
RXRA-203ENST00000484822 E7EQL1 145 aa12.02□□□□□ -0.49
RXRA-203ENST00000484822 PRR20EP86478 221 aa12.02□□□□□ -0.49
RXRA-203ENST00000484822 PRR20CP86479 221 aa12.02□□□□□ -0.49
RXRA-203ENST00000484822 PRR20DP86480 221 aa12.02□□□□□ -0.49
RXRA-203ENST00000484822 PRR20BP86481 221 aa12.02□□□□□ -0.49
RXRA-203ENST00000484822 PRR20AP86496 221 aa12.02□□□□□ -0.49
RXRA-203ENST00000484822 RSPO1Q2MKA7 263 aaPredicted RBP12.02□□□□□ -0.49
RXRA-203ENST00000484822 IGHV3-38A0A0C4DH36 116 aa12.01□□□□□ -0.49
RXRA-203ENST00000484822 DEFB131AP59861 70 aa12.01□□□□□ -0.49
RXRA-203ENST00000484822 K7EMI3 77 aa12.01□□□□□ -0.49
RXRA-203ENST00000484822 NXPH4O95158 308 aa12.01□□□□□ -0.49
RXRA-203ENST00000484822 ZNF134P52741 427 aa12.01□□□□□ -0.49
RXRA-203ENST00000484822 KLF5Q13887 457 aaPredicted RBP12.01□□□□□ -0.49
RXRA-203ENST00000484822 ANKRD39Q53RE8 183 aa12.01□□□□□ -0.49
RXRA-203ENST00000484822 F8WEM9 126 aa12.01□□□□□ -0.49
RXRA-203ENST00000484822 SS18Q15532 418 aa12.01□□□□□ -0.49
RXRA-203ENST00000484822 TRBV25-1A0A075B6N4 114 aa12.01□□□□□ -0.49
RXRA-203ENST00000484822 TECTAO75443 2155 aa12□□□□□ -0.49
RXRA-203ENST00000484822 ATP6V0E1O15342 81 aa12□□□□□ -0.49
RXRA-203ENST00000484822 CFC1BP0CG36 223 aa12□□□□□ -0.49
RXRA-203ENST00000484822 CFC1P0CG37 223 aa12□□□□□ -0.49
RXRA-203ENST00000484822 DEFB130BP0DP73 79 aa12□□□□□ -0.49
RXRA-203ENST00000484822 DEFB130AP0DP74 79 aa12□□□□□ -0.49
RXRA-203ENST00000484822 DYSFO75923 2080 aa12□□□□□ -0.49
RXRA-203ENST00000484822 IGLL5B9A064 214 aa12□□□□□ -0.49
RXRA-203ENST00000484822 IGLC1P0CG04 106 aa12□□□□□ -0.49
RXRA-203ENST00000484822 Q6ZR03 302 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 198.3 ms