RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SPATA45Q537H7 98 aa1.14□□□□□ -2.23
SMC4-215ENST00000484799 Q5XG85 94 aa1.14□□□□□ -2.23
SMC4-215ENST00000484799 ZCCHC23Q6ZST2 131 aa1.14□□□□□ -2.23
SMC4-215ENST00000484799 FKBP11Q9NYL4 201 aa1.14□□□□□ -2.23
SMC4-215ENST00000484799 KIAA1549LQ6ZVL6 1849 aa1.14□□□□□ -2.23
SMC4-215ENST00000484799 CASP8AP2Q9UKL3 1982 aa1.14□□□□□ -2.23
SMC4-215ENST00000484799 ROS1P08922 2347 aa1.14□□□□□ -2.23
SMC4-215ENST00000484799 NCOA6Q14686 2063 aaPredicted RBP1.13□□□□□ -2.23
SMC4-215ENST00000484799 BBIP1A8MTZ0 92 aa1.13□□□□□ -2.23
SMC4-215ENST00000484799 SMIM24O75264 130 aa1.13□□□□□ -2.23
SMC4-215ENST00000484799 KLF7O75840 302 aaPredicted RBP1.13□□□□□ -2.23
SMC4-215ENST00000484799 CKS2P33552 79 aa1.13□□□□□ -2.23
SMC4-215ENST00000484799 NEDD8Q15843 81 aa1.13□□□□□ -2.23
SMC4-215ENST00000484799 TCTEX1D1Q8N7M0 179 aa1.13□□□□□ -2.23
SMC4-215ENST00000484799 WFDC10AQ9H1F0 79 aa1.13□□□□□ -2.23
SMC4-215ENST00000484799 GSKIPQ9P0R6 139 aa1.13□□□□□ -2.23
SMC4-215ENST00000484799 ASCC3Q8N3C0 2202 aaKnown RBP1.13□□□□□ -2.23
SMC4-215ENST00000484799 FANCMQ8IYD8 2048 aa1.13□□□□□ -2.23
SMC4-215ENST00000484799 VIRMAQ69YN4 1812 aaKnown RBP1.12□□□□□ -2.23
SMC4-215ENST00000484799 COL1A1P02452 1464 aaPredicted RBP1.12□□□□□ -2.23
SMC4-215ENST00000484799 CEP152O94986 1710 aa1.12□□□□□ -2.23
SMC4-215ENST00000484799 SNRNP200O75643 2136 aaKnown RBP1.12□□□□□ -2.23
SMC4-215ENST00000484799 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.12□□□□□ -2.23
SMC4-215ENST00000484799 NCR3O14931 201 aa1.12□□□□□ -2.23
SMC4-215ENST00000484799 ARPC5O15511 151 aa1.12□□□□□ -2.23
SMC4-215ENST00000484799 TCRAP04437 139 aa1.12□□□□□ -2.23
SMC4-215ENST00000484799 SLC25A5P05141 298 aaKnown RBP1.12□□□□□ -2.23
SMC4-215ENST00000484799 OR10AC1Q8NH08 325 aa1.12□□□□□ -2.23
SMC4-215ENST00000484799 MAFIPQ8WZ33 124 aa1.12□□□□□ -2.23
SMC4-215ENST00000484799 SMIM7Q9BQ49 75 aa1.12□□□□□ -2.23
SMC4-215ENST00000484799 METTL1Q9UBP6 276 aaKnown RBP1.12□□□□□ -2.23
SMC4-215ENST00000484799 BOKQ9UMX3 212 aaPredicted RBP1.12□□□□□ -2.23
SMC4-215ENST00000484799 E9PCH4 1651 aa1.12□□□□□ -2.23
SMC4-215ENST00000484799 FGD6Q6ZV73 1430 aa1.12□□□□□ -2.23
SMC4-215ENST00000484799 MYH1P12882 1939 aa1.11□□□□□ -2.23
SMC4-215ENST00000484799 A0A1B0GW64 132 aa1.11□□□□□ -2.23
SMC4-215ENST00000484799 YPEL1O60688 119 aa1.11□□□□□ -2.23
SMC4-215ENST00000484799 EDF1O60869 148 aaKnown RBP1.11□□□□□ -2.23
SMC4-215ENST00000484799 IGHV3-30P01768 117 aa1.11□□□□□ -2.23
SMC4-215ENST00000484799 MT-ND4LP03901 98 aa1.11□□□□□ -2.23
SMC4-215ENST00000484799 IGHV3-30-5P0DP03 117 aa1.11□□□□□ -2.23
SMC4-215ENST00000484799 SMCO1Q147U7 214 aa1.11□□□□□ -2.23
SMC4-215ENST00000484799 TMEM244Q5VVB8 128 aa1.11□□□□□ -2.23
SMC4-215ENST00000484799 LINC00575Q6W349 94 aa1.11□□□□□ -2.23
SMC4-215ENST00000484799 C3orf62Q6ZUJ4 267 aa1.11□□□□□ -2.23
SMC4-215ENST00000484799 C5orf17Q8NAS9 161 aa1.11□□□□□ -2.23
SMC4-215ENST00000484799 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.11□□□□□ -2.23
SMC4-215ENST00000484799 PTPRDP23468 1912 aa1.11□□□□□ -2.23
SMC4-215ENST00000484799 OVOS2A0A0J9YW53 1432 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 OVOS2Q6IE36 1432 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 A0A1W2PPB8 328 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 A0A1W2PRS3 328 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 A6NN06 94 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 KIR3DP1A8MWS1 328 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 PDE6GP18545 87 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 KRTAP10-4P60372 401 aaPredicted RBP1.1□□□□□ -2.23
SMC4-215ENST00000484799 CKS1BP61024 79 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 PCBD1P61457 104 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 TMEM91Q6ZNR0 172 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 MMGT1Q8N4V1 131 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 OR8J3Q8NGG0 315 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 OTOSQ8NHW6 89 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 WDR97A6NE52 1622 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 ZGRF1Q86YA3 2104 aa1.1□□□□□ -2.23
SMC4-215ENST00000484799 KDM5CP41229 1560 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 ARHGAP31Q2M1Z3 1444 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 PHRF1Q9P1Y6 1649 aaKnown RBP1.09□□□□□ -2.23
SMC4-215ENST00000484799 TRAV23DV6A0A075B6W5 121 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 IGHV1-24A0A0C4DH33 117 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 LOC107984156A0A0G2JMH3 177 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 ZNF727A8MUV8 499 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 IGLV3-1P01715 115 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 GYPBP06028 91 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 HLA-DRB4P13762 266 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 KDELR1P24390 212 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 S100A12P80511 92 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 PLGLB1Q02325 96 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 ARL17AQ8IVW1 177 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 C10orf111Q8N326 155 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 LPAR5Q9H1C0 372 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 BANF2Q9H503 90 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 HLA-DRB4X5D2U9 266 aa1.09□□□□□ -2.23
SMC4-215ENST00000484799 ANK1P16157 1881 aa1.09□□□□□ -2.24
SMC4-215ENST00000484799 NINQ8N4C6 2090 aa1.09□□□□□ -2.24
SMC4-215ENST00000484799 RBP4P02753 201 aa1.08□□□□□ -2.24
SMC4-215ENST00000484799 EVI2AP22794 236 aa1.08□□□□□ -2.24
SMC4-215ENST00000484799 AKR1D1P51857 326 aa1.08□□□□□ -2.24
SMC4-215ENST00000484799 OCIAD2Q56VL3 154 aa1.08□□□□□ -2.24
SMC4-215ENST00000484799 IDO2Q6ZQW0 420 aa1.08□□□□□ -2.24
SMC4-215ENST00000484799 SBSPONQ8IVN8 264 aa1.08□□□□□ -2.24
SMC4-215ENST00000484799 SLC35B3Q9H1N7 401 aa1.08□□□□□ -2.24
SMC4-215ENST00000484799 MED12Q93074 2177 aa1.08□□□□□ -2.24
SMC4-215ENST00000484799 TET1Q8NFU7 2136 aa1.07□□□□□ -2.24
SMC4-215ENST00000484799 UHRF1BP1LA0JNW5 1464 aa1.07□□□□□ -2.24
SMC4-215ENST00000484799 CD14P08571 375 aa1.07□□□□□ -2.24
SMC4-215ENST00000484799 EFNA4P52798 201 aa1.07□□□□□ -2.24
SMC4-215ENST00000484799 ARPC4P59998 168 aa1.07□□□□□ -2.24
SMC4-215ENST00000484799 SNRPD3P62318 126 aaKnown RBP1.07□□□□□ -2.24
SMC4-215ENST00000484799 COPZ2Q9P299 210 aa1.07□□□□□ -2.24
SMC4-215ENST00000484799 PAIP2BQ9ULR5 123 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms