RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 GP9P14770 177 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 H3BUX3 64 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 TRACP01848 142 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 LINC01620Q4KN68 170 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 PIP4P2Q8N4L2 257 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 CARD19Q96LW7 228 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 AGPAT4-IT1Q9H0P7 198 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 OTOGLQ3ZCN5 2332 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 TMEM89A2RUT3 159 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 IGHV3-23P01764 117 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 P0C879 139 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 GTF3C1Q12789 2109 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 C8orf86Q6ZUL3 223 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 ZC2HC1AQ96GY0 325 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 EDA2RQ9HAV5 297 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 ZNF581Q9P0T4 197 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 C16orf54Q6UWD8 224 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 TRGV1A0A0A0MS02 117 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 E9PLD3 99 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 TCTEX1D4Q5JR98 221 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 TMEM243Q9BU79 118 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 SCN8AQ9UQD0 1980 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 DKK1O94907 266 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 COLQQ9Y215 455 aaPredicted RBP4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 FANCMQ8IYD8 2048 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 WDR86Q86TI4 376 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 FAM167A-AS1Q96KT0 104 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 LINC00574Q9H8X3 128 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 PKIGQ9Y2B9 76 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 TAX1BP3O14907 124 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 FSTL3O95633 263 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 RNF114Q9Y508 228 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 PTPN13Q12923 2485 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 COL11A1P12107 1806 aaPredicted RBP4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 C2orf70A6NJV1 201 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 K7EN84 100 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 FAM120AOSQ5T036 256 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 PCNX2A6NKB5 2137 aa4.87□□□□□ -1.63
PRPF4B-205ENST00000480058 SMKR1H3BMG3 65 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 ANKRD39Q53RE8 183 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 ARID2Q68CP9 1835 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 A0A1B0GXF2 115 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 K7EMT4 169 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 SYNJ2BPP57105 145 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 LINC00643Q86TS7 51 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 TM2D2Q9BX73 214 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 SCRT2Q9NQ03 307 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 SAA4P35542 130 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 SH2D6Q7Z4S9 175 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 PLXNB2O15031 1838 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 A0A0G2JMZ2 1700 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 LRRC37A2A6NM11 1700 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 TRAV13-1A0A0B4J241 112 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 RNASE8Q8TDE3 154 aaKnown RBP4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 MBD6Q96DN6 1003 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 IGF2BP2-AS1Q96M15 143 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 A0A0J9YXY3 114 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 COL11A2P13942 1736 aaPredicted RBP4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 C19orf71A6NCJ1 209 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 J3KT08 172 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 ZNF134P52741 427 aa4.86□□□□□ -1.63
PRPF4B-205ENST00000480058 ZNF462Q96JM2 2506 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 TLN1Q9Y490 2541 aaKnown RBP4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 IGHV7-4-1A0A0J9YVY3 117 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 IGHV1-69P01742 117 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 IGF2-ASQ6U949 168 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 FOXI1Q12951 378 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 ANXA2RQ3ZCQ2 193 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 BRCA1P38398 1863 aaKnown RBP4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 MUC6Q6W4X9 2439 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 TNCP24821 2201 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 DOCK11Q5JSL3 2073 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 A0A0U1RRA0 63 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 C11orf53Q8IXP5 236 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 PLA2G2EQ9NZK7 142 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 CHD5Q8TDI0 1954 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 E7EQL1 145 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 ATP6V0E1O15342 81 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 AMTNQ6UX39 209 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 SIPA1L1O43166 1804 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 TRBV10-2A0A0K0K1G8 114 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 CXCL5P42830 114 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 RBMY1FQ15415 496 aaKnown RBP4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 IGFL2Q6UWQ7 119 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 DKK2Q9UBU2 259 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 SCN5AQ14524 2016 aa4.85□□□□□ -1.63
PRPF4B-205ENST00000480058 LHBP01229 141 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 TCF15Q12870 199 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 ATP5EP2Q5VTU8 51 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 NPBQ8NG41 125 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 MYO16Q9Y6X6 1858 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 A0A0B4J2C4 111 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 hADV29S1A0JD25 119 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 CGB3P0DN86 165 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 CGB7P0DN87 165 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 CD24P25063 80 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 DEFB131AP59861 70 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 SLC25A29Q8N8R3 303 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 IMUPQ9GZP8 106 aa4.84□□□□□ -1.63
PRPF4B-205ENST00000480058 IGLV11-55A0A075B6I3 123 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms