RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 CSPG4Q6UVK1 2322 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 MRGPRG-AS1Q2M3A8 158 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 C3orf36Q3SXR2 165 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 CASC2Q6XLA1 102 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 OPRPNQ99935 248 aaPredicted RBP3.35□□□□□ -1.87
SCN2A-205ENST00000480032 FGF22Q9HCT0 170 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 DEFB127Q9H1M4 99 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 DEPPQ9NTK1 212 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 PRR14LQ5THK1 2151 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 IGLV3-12A0A075B6K2 115 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 NUP98P52948 1817 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 ZNF561-AS1K7EIQ3 104 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 SH2D6Q7Z4S9 175 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 RITA1Q96K30 269 aa3.35□□□□□ -1.87
SCN2A-205ENST00000480032 TNCP24821 2201 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 BTAF1O14981 1849 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 COL11A1P12107 1806 aaPredicted RBP3.34□□□□□ -1.87
SCN2A-205ENST00000480032 IGHV3-64DA0A0J9YX35 117 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 SCRG1O75711 98 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 HTN1P15515 57 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 ZNF726P1Q15940 193 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 NYNRINQ9P2P1 1898 aaKnown RBP3.34□□□□□ -1.87
SCN2A-205ENST00000480032 TRAV8-3A0A0A6YYJ7 113 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 CD27P26842 260 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 J3QLI3 93 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 IGFBP6P24592 240 aaPredicted RBP3.34□□□□□ -1.87
SCN2A-205ENST00000480032 NFE4Q86UQ8 179 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 TOMM6Q96B49 74 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 JMJD8Q96S16 334 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 LOC101059948A0A1B0GTJ6 334 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 IGHV3-33P01772 117 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 PIGYQ3MUY2 71 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 ATP11AUNQ6ZP68 121 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 C18orf15Q96N68 181 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 CCL13Q99616 98 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 LOC389332A0A1B0GUA5 103 aa3.34□□□□□ -1.87
SCN2A-205ENST00000480032 SPG11Q96JI7 2443 aa3.34□□□□□ -1.88
SCN2A-205ENST00000480032 PKDREJQ9NTG1 2253 aa3.34□□□□□ -1.88
SCN2A-205ENST00000480032 H7C423 109 aa3.34□□□□□ -1.88
SCN2A-205ENST00000480032 OXLD1Q5BKU9 147 aa3.34□□□□□ -1.88
SCN2A-205ENST00000480032 ITGB4P16144 1822 aa3.34□□□□□ -1.88
SCN2A-205ENST00000480032 I3L3M4 83 aa3.34□□□□□ -1.88
SCN2A-205ENST00000480032 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.34□□□□□ -1.88
SCN2A-205ENST00000480032 LTBP1Q14766 1721 aa3.34□□□□□ -1.88
SCN2A-205ENST00000480032 TRAV40A0A0B4J280 105 aa3.34□□□□□ -1.88
SCN2A-205ENST00000480032 SRRM4A7MD48 611 aaKnown RBP3.34□□□□□ -1.88
SCN2A-205ENST00000480032 TFF3Q07654 80 aa3.34□□□□□ -1.88
SCN2A-205ENST00000480032 MIR17HGQ75NE6 70 aa3.34□□□□□ -1.88
SCN2A-205ENST00000480032 IGHV4-34P06331 123 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 DEFB109BQ30KR1 87 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 FOXQ1Q9C009 403 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 ZNF22P17026 224 aaPredicted RBP3.33□□□□□ -1.88
SCN2A-205ENST00000480032 LRRK1Q38SD2 2015 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 FSTL3O95633 263 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 COX6B1P14854 86 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 WFDC8Q8IUA0 241 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 GREB1LQ9C091 1923 aaPredicted RBP3.33□□□□□ -1.88
SCN2A-205ENST00000480032 KIAA1671Q9BY89 1806 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 IGHV3-9P01782 118 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 CTSGP08311 255 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 CELA3BP08861 270 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 RPS27P42677 84 aaKnown RBP3.33□□□□□ -1.88
SCN2A-205ENST00000480032 LYZL1Q6UWQ5 148 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 EMC6Q9BV81 110 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 CDIP1Q9H305 208 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 TMEM202A6NGA9 273 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 DEFB108BQ8NET1 73 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 XAGE1AQ9HD64 81 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 UBR3Q6ZT12 1888 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 ATP5J2P56134 94 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 NSUN5P1Q3KNT7 163 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 ZNF134P52741 427 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 FOXF2Q12947 444 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 STHQ8IWL8 128 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 ODF3Q96PU9 254 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 NACAE9PAV3 2078 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 MIAQ16674 131 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 CDPF1Q6NVV7 123 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 TDRD15B5MCY1 1934 aaKnown RBP3.33□□□□□ -1.88
SCN2A-205ENST00000480032 TICRRQ7Z2Z1 1910 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 STPG1Q5TH74 334 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 LINC00173Q6ZV60 143 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 TMEM61Q8N0U2 210 aa3.33□□□□□ -1.88
SCN2A-205ENST00000480032 F8WEM9 126 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 CCL24O00175 119 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 H7C2G1 150 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 IGKV1D-33P01593 117 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 IGKV1-33P01594 117 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 RALGAPA2Q2PPJ7 1873 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 GFRALQ6UXV0 394 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 ARRDC1-AS1Q9H2J1 176 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 ZNF71Q9NQZ8 489 aaPredicted RBP3.32□□□□□ -1.88
SCN2A-205ENST00000480032 HOXB4P17483 251 aaPredicted RBP3.32□□□□□ -1.88
SCN2A-205ENST00000480032 TET1Q8NFU7 2136 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 DOCK7Q96N67 2140 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 NDUFA4L2Q9NRX3 87 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 TRAV4A0A0B4J268 109 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 GUSBP11Q6P575 273 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 CELA1Q9UNI1 258 aa3.32□□□□□ -1.88
SCN2A-205ENST00000480032 IGKV3-7A0A075B6H7 116 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms