RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 MBNL2Q5VZF2 373 aaKnown RBP8.54□□□□□ -1.04
CHD6-208ENST00000480022 MRPL36Q9P0J6 103 aaKnown RBP8.54□□□□□ -1.04
CHD6-208ENST00000480022 TRBV20-1A0A075B6N2 111 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 TRAV40A0A0B4J280 105 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 LOC107984156A0A0G2JMH3 177 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 TTC32Q5I0X7 151 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 ARL17AQ8IVW1 177 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 MAP1LC3AQ9H492 121 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 CSDC2Q9Y534 153 aaKnown RBP8.53□□□□□ -1.04
CHD6-208ENST00000480022 CENPVL3A0A0U1RRI6 287 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 NCBP2LA6PVI3 153 aaKnown RBP8.53□□□□□ -1.04
CHD6-208ENST00000480022 SUB1P53999 127 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHD6-208ENST00000480022 C22orf34Q6ZV56 151 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 RPEQ96AT9 228 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 FBXL15Q9H469 300 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 INS-IGF2F8WCM5 200 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 IFITM1P13164 125 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 LYRM7Q5U5X0 104 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 EXOC3-AS1Q8N2X6 119 aa8.53□□□□□ -1.04
CHD6-208ENST00000480022 ADGRG4Q8IZF6 3080 aa8.52□□□□□ -1.05
CHD6-208ENST00000480022 A8MWV9 139 aa8.52□□□□□ -1.05
CHD6-208ENST00000480022 SNCGO76070 127 aa8.52□□□□□ -1.05
CHD6-208ENST00000480022 TMEM75Q8N9X5 138 aa8.52□□□□□ -1.05
CHD6-208ENST00000480022 KLF14Q8TD94 323 aaPredicted RBP8.52□□□□□ -1.05
CHD6-208ENST00000480022 LINC01546A6NGU7 62 aa8.52□□□□□ -1.05
CHD6-208ENST00000480022 LINC01548A6NM66 108 aa8.52□□□□□ -1.05
CHD6-208ENST00000480022 PRTN3P24158 256 aa8.52□□□□□ -1.05
CHD6-208ENST00000480022 CRIP1P50238 77 aa8.52□□□□□ -1.05
CHD6-208ENST00000480022 HIVEP3Q5T1R4 2406 aa8.52□□□□□ -1.05
CHD6-208ENST00000480022 INTS1Q8N201 2190 aaKnown RBP8.52□□□□□ -1.05
CHD6-208ENST00000480022 SLC25A15Q9Y619 301 aa8.52□□□□□ -1.05
CHD6-208ENST00000480022 LINC01549A6NIU2 74 aa8.51□□□□□ -1.05
CHD6-208ENST00000480022 C19orf84I3L1E1 186 aa8.51□□□□□ -1.05
CHD6-208ENST00000480022 WT1-ASQ06250 92 aa8.51□□□□□ -1.05
CHD6-208ENST00000480022 ZFP2Q6ZN57 461 aa8.51□□□□□ -1.05
CHD6-208ENST00000480022 AJUBAQ96IF1 538 aa8.51□□□□□ -1.05
CHD6-208ENST00000480022 SLC25A39Q9BZJ4 359 aaPredicted RBP8.51□□□□□ -1.05
CHD6-208ENST00000480022 RAB9BQ9NP90 201 aa8.51□□□□□ -1.05
CHD6-208ENST00000480022 MRPL35Q9NZE8 188 aaKnown RBP8.51□□□□□ -1.05
CHD6-208ENST00000480022 IGKV1D-17A0A075B6S4 117 aa8.51□□□□□ -1.05
CHD6-208ENST00000480022 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
CHD6-208ENST00000480022 E7EUB6 86 aa8.51□□□□□ -1.05
CHD6-208ENST00000480022 C17orf58Q2M2W7 97 aa8.51□□□□□ -1.05
CHD6-208ENST00000480022 SBSPONQ8IVN8 264 aa8.51□□□□□ -1.05
CHD6-208ENST00000480022 NXT2Q9NPJ8 142 aaKnown RBP8.51□□□□□ -1.05
CHD6-208ENST00000480022 TMSB15BA0A087X1C1 80 aa8.5□□□□□ -1.05
CHD6-208ENST00000480022 ASIPP42127 132 aa8.5□□□□□ -1.05
CHD6-208ENST00000480022 UBE2D3P61077 147 aa8.5□□□□□ -1.05
CHD6-208ENST00000480022 UBE2D2P62837 147 aa8.5□□□□□ -1.05
CHD6-208ENST00000480022 ANKRD29Q8N6D5 301 aa8.5□□□□□ -1.05
CHD6-208ENST00000480022 LINC01560Q8TB33 94 aa8.5□□□□□ -1.05
CHD6-208ENST00000480022 TRGV9Q99603 122 aa8.5□□□□□ -1.05
CHD6-208ENST00000480022 FLNCQ14315 2725 aa8.5□□□□□ -1.05
CHD6-208ENST00000480022 FCN3O75636 299 aa8.5□□□□□ -1.05
CHD6-208ENST00000480022 CGB3P0DN86 165 aa8.5□□□□□ -1.05
CHD6-208ENST00000480022 CGB7P0DN87 165 aa8.5□□□□□ -1.05
CHD6-208ENST00000480022 SFTA2Q6UW10 78 aa8.5□□□□□ -1.05
CHD6-208ENST00000480022 TRAV4A0A0B4J268 109 aa8.49□□□□□ -1.05
CHD6-208ENST00000480022 PF4P02776 101 aa8.49□□□□□ -1.05
CHD6-208ENST00000480022 Q6Q795 121 aa8.49□□□□□ -1.05
CHD6-208ENST00000480022 PPP1R27Q86WC6 154 aa8.49□□□□□ -1.05
CHD6-208ENST00000480022 ZNRF1Q8ND25 227 aa8.49□□□□□ -1.05
CHD6-208ENST00000480022 H3BVH4 76 aa8.49□□□□□ -1.05
CHD6-208ENST00000480022 TIMM8AO60220 97 aaPredicted RBP8.49□□□□□ -1.05
CHD6-208ENST00000480022 FAM159AQ6UWV7 190 aa8.49□□□□□ -1.05
CHD6-208ENST00000480022 MRAPQ8TCY5 172 aa8.49□□□□□ -1.05
CHD6-208ENST00000480022 TMEM14CQ9P0S9 112 aa8.49□□□□□ -1.05
CHD6-208ENST00000480022 HIGD1AQ9Y241 93 aa8.49□□□□□ -1.05
CHD6-208ENST00000480022 IGKV3-15P01624 115 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 MRPL23Q16540 153 aaKnown RBP8.48□□□□□ -1.05
CHD6-208ENST00000480022 MYO18BQ8IUG5 2567 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 TENM4Q6N022 2769 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 PLNP26678 52 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 TMEM190Q8WZ59 177 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 COL12A1Q99715 3063 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 PCNX1Q96RV3 2341 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 IGHV3OR15-7A0A075B7D8 119 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 CGB1A6NKQ9 187 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 TCL1BO95988 128 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 IGLV1-44P01699 117 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 IGHG4P01861 327 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 UBE2D1P51668 147 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 C10orf55Q5SWW7 151 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 C8orf49Q96NF6 230 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 RASL11BQ9BPW5 248 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 NAV3Q8IVL0 2385 aa8.48□□□□□ -1.05
CHD6-208ENST00000480022 TRAV8-2A0A0B4J237 113 aa8.47□□□□□ -1.05
CHD6-208ENST00000480022 IGHV1-18A0A0C4DH31 117 aa8.47□□□□□ -1.05
CHD6-208ENST00000480022 SMIM9A6NGZ8 99 aa8.47□□□□□ -1.05
CHD6-208ENST00000480022 M0R1B8 84 aa8.47□□□□□ -1.05
CHD6-208ENST00000480022 NDUFA3O95167 84 aa8.47□□□□□ -1.05
CHD6-208ENST00000480022 MEIG1Q5JSS6 88 aa8.47□□□□□ -1.05
CHD6-208ENST00000480022 RUSC1-AS1Q66K80 236 aa8.47□□□□□ -1.05
CHD6-208ENST00000480022 MYOZ3Q8TDC0 251 aa8.47□□□□□ -1.05
CHD6-208ENST00000480022 USP9XQ93008 2570 aaPredicted RBP8.47□□□□□ -1.05
CHD6-208ENST00000480022 SRRM5B3KS81 715 aa8.47□□□□□ -1.05
CHD6-208ENST00000480022 CECR9P0C854 216 aa8.47□□□□□ -1.05
CHD6-208ENST00000480022 CRLF1O75462 422 aa8.46□□□□□ -1.05
CHD6-208ENST00000480022 CRYGBP07316 175 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms