RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 Q5PR19 223 aa16.05■□□□□ 0.16
COL13A1-208ENST00000479733 SFTA2Q6UW10 78 aa16.05■□□□□ 0.16
COL13A1-208ENST00000479733 NDPQ00604 133 aa16.04■□□□□ 0.16
COL13A1-208ENST00000479733 Q8N8P6 123 aa16.04■□□□□ 0.16
COL13A1-208ENST00000479733 IGLV11-55A0A075B6I3 123 aa16.04■□□□□ 0.16
COL13A1-208ENST00000479733 SHISA9B4DS77 424 aa16.04■□□□□ 0.16
COL13A1-208ENST00000479733 LY6LH3BQJ8 138 aa16.04■□□□□ 0.16
COL13A1-208ENST00000479733 J3QR89 54 aa16.04■□□□□ 0.16
COL13A1-208ENST00000479733 Q6ZQT7 251 aa16.04■□□□□ 0.16
COL13A1-208ENST00000479733 TTC9CQ8N5M4 171 aa16.04■□□□□ 0.16
COL13A1-208ENST00000479733 LY6HO94772 140 aa16.03■□□□□ 0.16
COL13A1-208ENST00000479733 CCDC144NLQ6NUI1 221 aa16.03■□□□□ 0.16
COL13A1-208ENST00000479733 GAGE13Q4V321 117 aa16.03■□□□□ 0.16
COL13A1-208ENST00000479733 SRSF8Q9BRL6 282 aaKnown RBP16.03■□□□□ 0.16
COL13A1-208ENST00000479733 OTOGLQ3ZCN5 2332 aa16.03■□□□□ 0.16
COL13A1-208ENST00000479733 COX8CQ7Z4L0 72 aa16.02■□□□□ 0.16
COL13A1-208ENST00000479733 WFDC12Q8WWY7 111 aa16.02■□□□□ 0.16
COL13A1-208ENST00000479733 C11orf21Q9P2W6 132 aa16.02■□□□□ 0.16
COL13A1-208ENST00000479733 IGHV3-49A0A0A0MS15 119 aa16.02■□□□□ 0.15
COL13A1-208ENST00000479733 TMEM190Q8WZ59 177 aa16.02■□□□□ 0.15
COL13A1-208ENST00000479733 SMPXQ9UHP9 88 aa16.02■□□□□ 0.15
COL13A1-208ENST00000479733 IGKV3D-20A0A0C4DH25 116 aa16.01■□□□□ 0.15
COL13A1-208ENST00000479733 SPRY2O43597 315 aa16.01■□□□□ 0.15
COL13A1-208ENST00000479733 RNF5Q99942 180 aa16.01■□□□□ 0.15
COL13A1-208ENST00000479733 CTSGP08311 255 aa16.01■□□□□ 0.15
COL13A1-208ENST00000479733 LAGE3Q14657 143 aa16.01■□□□□ 0.15
COL13A1-208ENST00000479733 CYSLTR1Q9Y271 337 aa16.01■□□□□ 0.15
COL13A1-208ENST00000479733 RIF1Q5UIP0 2472 aaKnown RBP16.01■□□□□ 0.15
COL13A1-208ENST00000479733 IGLV2-18A0A075B6J9 118 aa16.01■□□□□ 0.15
COL13A1-208ENST00000479733 C5orf64Q2M2E5 130 aa16.01■□□□□ 0.15
COL13A1-208ENST00000479733 DPM3Q9P2X0 92 aa16.01■□□□□ 0.15
COL13A1-208ENST00000479733 A0A1B0GWB2 263 aa16■□□□□ 0.15
COL13A1-208ENST00000479733 CNFNQ9BYD5 112 aa16■□□□□ 0.15
COL13A1-208ENST00000479733 LINC01546A6NGU7 62 aa16■□□□□ 0.15
COL13A1-208ENST00000479733 PSMG4Q5JS54 123 aa16■□□□□ 0.15
COL13A1-208ENST00000479733 CLUHP3Q96NS8 147 aa16■□□□□ 0.15
COL13A1-208ENST00000479733 NBASA2RRP1 2371 aa16■□□□□ 0.15
COL13A1-208ENST00000479733 BSNQ9UPA5 3926 aa16■□□□□ 0.15
COL13A1-208ENST00000479733 IGFL3Q6UXB1 125 aa15.99■□□□□ 0.15
COL13A1-208ENST00000479733 J3KRW8 73 aa15.98■□□□□ 0.15
COL13A1-208ENST00000479733 ATP6V0BQ99437 205 aa15.98■□□□□ 0.15
COL13A1-208ENST00000479733 A0A087WX48 190 aa15.98■□□□□ 0.15
COL13A1-208ENST00000479733 RRN3P1Q2M238 152 aa15.98■□□□□ 0.15
COL13A1-208ENST00000479733 PSMG3-AS1Q96PY0 264 aa15.98■□□□□ 0.15
COL13A1-208ENST00000479733 A0A1B0GV72 72 aa15.97■□□□□ 0.15
COL13A1-208ENST00000479733 SRSF1Q07955 248 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL13A1-208ENST00000479733 LINC01559Q495D7 138 aa15.97■□□□□ 0.15
COL13A1-208ENST00000479733 SPANXN1Q5VSR9 72 aa15.97■□□□□ 0.15
COL13A1-208ENST00000479733 C20orf78Q9BR46 151 aa15.97■□□□□ 0.15
COL13A1-208ENST00000479733 SPTBN1Q01082 2364 aaKnown RBP15.97■□□□□ 0.15
COL13A1-208ENST00000479733 NRACQ8N912 160 aa15.97■□□□□ 0.15
COL13A1-208ENST00000479733 SCGB1A1P11684 91 aa15.96■□□□□ 0.15
COL13A1-208ENST00000479733 RAB9AP51151 201 aa15.96■□□□□ 0.15
COL13A1-208ENST00000479733 AGPAT4-IT1Q9H0P7 198 aa15.96■□□□□ 0.15
COL13A1-208ENST00000479733 NDUFS8O00217 210 aa15.95■□□□□ 0.14
COL13A1-208ENST00000479733 SCGB2A2Q13296 93 aa15.95■□□□□ 0.14
COL13A1-208ENST00000479733 SPATA25Q9BR10 227 aa15.95■□□□□ 0.14
COL13A1-208ENST00000479733 SPTA1P02549 2419 aa15.95■□□□□ 0.14
COL13A1-208ENST00000479733 OR11H12B2RN74 326 aa15.95■□□□□ 0.14
COL13A1-208ENST00000479733 NPBQ8NG41 125 aa15.95■□□□□ 0.14
COL13A1-208ENST00000479733 OR11H1Q8NG94 326 aa15.95■□□□□ 0.14
COL13A1-208ENST00000479733 OR11H2Q8NH07 326 aa15.95■□□□□ 0.14
COL13A1-208ENST00000479733 APOMO95445 188 aa15.94■□□□□ 0.14
COL13A1-208ENST00000479733 CKS1BP61024 79 aa15.94■□□□□ 0.14
COL13A1-208ENST00000479733 DEFB104AQ8WTQ1 72 aa15.94■□□□□ 0.14
COL13A1-208ENST00000479733 PGPEP1Q9NXJ5 209 aa15.94■□□□□ 0.14
COL13A1-208ENST00000479733 PRO0461Q9UI25 63 aa15.94■□□□□ 0.14
COL13A1-208ENST00000479733 ANKHD1Q8IWZ3 2542 aaKnown RBP15.94■□□□□ 0.14
COL13A1-208ENST00000479733 TRBV7-3A0A075B6L6 115 aa15.93■□□□□ 0.14
COL13A1-208ENST00000479733 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.93■□□□□ 0.14
COL13A1-208ENST00000479733 H3BVH4 76 aa15.93■□□□□ 0.14
COL13A1-208ENST00000479733 PLNP26678 52 aa15.93■□□□□ 0.14
COL13A1-208ENST00000479733 TAL2Q16559 108 aa15.93■□□□□ 0.14
COL13A1-208ENST00000479733 PIP4P1Q86T03 277 aa15.93■□□□□ 0.14
COL13A1-208ENST00000479733 MRPL16Q9NX20 251 aaKnown RBP15.93■□□□□ 0.14
COL13A1-208ENST00000479733 MYMXA0A1B0GTQ4 84 aa15.92■□□□□ 0.14
COL13A1-208ENST00000479733 HOXA3O43365 443 aaPredicted RBP15.92■□□□□ 0.14
COL13A1-208ENST00000479733 CLEC3BP05452 202 aa15.92■□□□□ 0.14
COL13A1-208ENST00000479733 SVIPQ8NHG7 77 aa15.92■□□□□ 0.14
COL13A1-208ENST00000479733 LINC01560Q8TB33 94 aa15.92■□□□□ 0.14
COL13A1-208ENST00000479733 SCGB3A1Q96QR1 104 aa15.92■□□□□ 0.14
COL13A1-208ENST00000479733 LOC107984156A0A0G2JMH3 177 aa15.91■□□□□ 0.14
COL13A1-208ENST00000479733 B9A039 149 aa15.91■□□□□ 0.14
COL13A1-208ENST00000479733 H7C1H1 209 aa15.91■□□□□ 0.14
COL13A1-208ENST00000479733 SRSF2Q01130 221 aaKnown RBP15.91■□□□□ 0.14
COL13A1-208ENST00000479733 ARL17AQ8IVW1 177 aa15.91■□□□□ 0.14
COL13A1-208ENST00000479733 IGHV7-4-1A0A0J9YVY3 117 aa15.91■□□□□ 0.14
COL13A1-208ENST00000479733 ECSCRQ19T08 205 aa15.91■□□□□ 0.14
COL13A1-208ENST00000479733 C15orf32Q32M92 178 aa15.91■□□□□ 0.14
COL13A1-208ENST00000479733 MORN3Q6PF18 240 aaPredicted RBP15.91■□□□□ 0.14
COL13A1-208ENST00000479733 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.91■□□□□ 0.14
COL13A1-208ENST00000479733 ZNF502Q8TBZ5 544 aa15.91■□□□□ 0.14
COL13A1-208ENST00000479733 F8VRH5 84 aa15.91■□□□□ 0.14
COL13A1-208ENST00000479733 ZNF672Q499Z4 452 aaPredicted RBP15.91■□□□□ 0.14
COL13A1-208ENST00000479733 TMEM78Q5T7P6 136 aa15.91■□□□□ 0.14
COL13A1-208ENST00000479733 ZNF48Q96MX3 618 aaPredicted RBP15.91■□□□□ 0.14
COL13A1-208ENST00000479733 VKORC1Q9BQB6 163 aa15.91■□□□□ 0.14
COL13A1-208ENST00000479733 CD3EP07766 207 aa15.9■□□□□ 0.14
COL13A1-208ENST00000479733 HLA-DRB4P13762 266 aa15.9■□□□□ 0.14
COL13A1-208ENST00000479733 ZNF418Q8TF45 676 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms