RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 HMGB3O15347 200 aaKnown RBP11.98□□□□□ -0.49
ECHDC1-216ENST00000479525 FUSP35637 526 aaKnown RBP eCLIP11.98□□□□□ -0.49
ECHDC1-216ENST00000479525 ZNF138P52744 262 aa11.98□□□□□ -0.49
ECHDC1-216ENST00000479525 ANXA2RQ3ZCQ2 193 aa11.98□□□□□ -0.49
ECHDC1-216ENST00000479525 ARPC5LQ9BPX5 153 aa11.98□□□□□ -0.49
ECHDC1-216ENST00000479525 MARVELD1Q9BSK0 173 aa11.98□□□□□ -0.49
ECHDC1-216ENST00000479525 SFTA3P0C7M3 94 aa11.97□□□□□ -0.49
ECHDC1-216ENST00000479525 RPL12P30050 165 aaKnown RBP11.97□□□□□ -0.49
ECHDC1-216ENST00000479525 CYCSP99999 105 aaKnown RBP11.97□□□□□ -0.49
ECHDC1-216ENST00000479525 MRPS16Q9Y3D3 137 aaKnown RBP11.97□□□□□ -0.49
ECHDC1-216ENST00000479525 APOBP04114 4563 aaKnown RBP11.97□□□□□ -0.49
ECHDC1-216ENST00000479525 SPATA12Q7Z6I5 190 aa11.96□□□□□ -0.49
ECHDC1-216ENST00000479525 C8orf49Q96NF6 230 aa11.96□□□□□ -0.49
ECHDC1-216ENST00000479525 LINC00467Q9BRT7 94 aa11.96□□□□□ -0.49
ECHDC1-216ENST00000479525 KCNIP2Q9NS61 270 aa11.96□□□□□ -0.49
ECHDC1-216ENST00000479525 MDFICQ9P1T7 246 aa11.96□□□□□ -0.49
ECHDC1-216ENST00000479525 NAGKQ9UJ70 344 aa11.96□□□□□ -0.49
ECHDC1-216ENST00000479525 TNFRSF18Q9Y5U5 241 aa11.96□□□□□ -0.49
ECHDC1-216ENST00000479525 PAX4O43316 350 aa11.95□□□□□ -0.5
ECHDC1-216ENST00000479525 RAB2AP61019 212 aa11.95□□□□□ -0.5
ECHDC1-216ENST00000479525 SCGB1C1Q8TD33 95 aa11.95□□□□□ -0.5
ECHDC1-216ENST00000479525 DIRC3C9JPN6 131 aa11.94□□□□□ -0.5
ECHDC1-216ENST00000479525 F6UZH7 168 aa11.94□□□□□ -0.5
ECHDC1-216ENST00000479525 IFNA5P01569 189 aa11.94□□□□□ -0.5
ECHDC1-216ENST00000479525 CSN1S1P47710 185 aa11.94□□□□□ -0.5
ECHDC1-216ENST00000479525 KRTAP10-2P60368 255 aa11.94□□□□□ -0.5
ECHDC1-216ENST00000479525 GNG5P63218 68 aa11.94□□□□□ -0.5
ECHDC1-216ENST00000479525 ZNF415Q09FC8 603 aa11.94□□□□□ -0.5
ECHDC1-216ENST00000479525 TMEM183BQ1AE95 376 aa11.94□□□□□ -0.5
ECHDC1-216ENST00000479525 TMEM183AQ8IXX5 376 aa11.94□□□□□ -0.5
ECHDC1-216ENST00000479525 ST6GAL2Q96JF0 529 aa11.94□□□□□ -0.5
ECHDC1-216ENST00000479525 SGK494Q96LW2 274 aa11.94□□□□□ -0.5
ECHDC1-216ENST00000479525 UPK3BQ9BT76 320 aa11.94□□□□□ -0.5
ECHDC1-216ENST00000479525 TRAV8-1A0A0A6YYK1 113 aa11.93□□□□□ -0.5
ECHDC1-216ENST00000479525 PGPA6NDG6 321 aa11.93□□□□□ -0.5
ECHDC1-216ENST00000479525 LINC00315P59091 139 aa11.93□□□□□ -0.5
ECHDC1-216ENST00000479525 KHDC3LQ587J8 217 aa11.93□□□□□ -0.5
ECHDC1-216ENST00000479525 IBA57Q5T440 356 aaKnown RBP11.93□□□□□ -0.5
ECHDC1-216ENST00000479525 H3BNG1 76 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 FHL2Q14192 279 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 ZNF479Q96JC4 524 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 ALG5Q9Y673 324 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 ICOSQ9Y6W8 199 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 GNRH2O43555 120 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 NXPH4O95158 308 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 CRYBA4P53673 196 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 DEFA1P59665 94 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 DEFA3P59666 94 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 ZNF266Q14584 549 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 TTC32Q5I0X7 151 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 GOLT1AQ6ZVE7 132 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 C18orf15Q96N68 181 aa11.92□□□□□ -0.5
ECHDC1-216ENST00000479525 TRGV4A0A0C4DH28 118 aa11.91□□□□□ -0.5
ECHDC1-216ENST00000479525 NMBP08949 121 aa11.91□□□□□ -0.5
ECHDC1-216ENST00000479525 PET100P0DJ07 73 aa11.91□□□□□ -0.5
ECHDC1-216ENST00000479525 TVP23CQ96ET8 276 aa11.91□□□□□ -0.5
ECHDC1-216ENST00000479525 RBAKDNA6NC62 111 aa11.9□□□□□ -0.5
ECHDC1-216ENST00000479525 SIVA1O15304 175 aa11.9□□□□□ -0.5
ECHDC1-216ENST00000479525 TAS2R45P59539 299 aa11.9□□□□□ -0.5
ECHDC1-216ENST00000479525 PRO0255Q9UI72 69 aa11.9□□□□□ -0.5
ECHDC1-216ENST00000479525 HHLA3Q9XRX5 114 aa11.9□□□□□ -0.5
ECHDC1-216ENST00000479525 LOC100131303A0A0U1RQF7 123 aa11.89□□□□□ -0.51
ECHDC1-216ENST00000479525 ACOT6Q3I5F7 207 aaPredicted RBP11.89□□□□□ -0.51
ECHDC1-216ENST00000479525 Q6AWC8 147 aa11.89□□□□□ -0.51
ECHDC1-216ENST00000479525 FAM159AQ6UWV7 190 aa11.89□□□□□ -0.51
ECHDC1-216ENST00000479525 LYPD1Q8N2G4 141 aa11.89□□□□□ -0.51
ECHDC1-216ENST00000479525 MAPKAPK5-AS1Q8N8E1 139 aa11.89□□□□□ -0.51
ECHDC1-216ENST00000479525 HSD17B11Q8NBQ5 300 aa11.89□□□□□ -0.51
ECHDC1-216ENST00000479525 CMTM2Q8TAZ6 248 aa11.89□□□□□ -0.51
ECHDC1-216ENST00000479525 BATF3Q9NR55 127 aa11.89□□□□□ -0.51
ECHDC1-216ENST00000479525 OTORQ9NRC9 128 aa11.89□□□□□ -0.51
ECHDC1-216ENST00000479525 IGHV3-16A0A0C4DH30 117 aa11.88□□□□□ -0.51
ECHDC1-216ENST00000479525 A0A1W2PPV4 95 aa11.88□□□□□ -0.51
ECHDC1-216ENST00000479525 LYPD5Q6UWN5 251 aa11.88□□□□□ -0.51
ECHDC1-216ENST00000479525 OR10G4Q8NGN3 311 aa11.88□□□□□ -0.51
ECHDC1-216ENST00000479525 OR10G9Q8NGN4 311 aa11.88□□□□□ -0.51
ECHDC1-216ENST00000479525 OR10G7Q8NGN6 311 aa11.88□□□□□ -0.51
ECHDC1-216ENST00000479525 ARL14EPLP0DKL9 152 aa11.87□□□□□ -0.51
ECHDC1-216ENST00000479525 Q5BKY6 102 aa11.87□□□□□ -0.51
ECHDC1-216ENST00000479525 Q6ZRN7 208 aaPredicted RBP11.87□□□□□ -0.51
ECHDC1-216ENST00000479525 K7EQD1 137 aa11.86□□□□□ -0.51
ECHDC1-216ENST00000479525 TYMSP04818 313 aa11.86□□□□□ -0.51
ECHDC1-216ENST00000479525 GYPEP15421 78 aa11.86□□□□□ -0.51
ECHDC1-216ENST00000479525 WFDC10BQ8IUB3 73 aa11.86□□□□□ -0.51
ECHDC1-216ENST00000479525 SH3BGRL3Q9H299 93 aa11.86□□□□□ -0.51
ECHDC1-216ENST00000479525 TRGV11A0A075B6L2 103 aa11.85□□□□□ -0.51
ECHDC1-216ENST00000479525 TRBV7-9A0A0J9YWB2 115 aa11.85□□□□□ -0.51
ECHDC1-216ENST00000479525 A0A1W2PPQ1 181 aa11.85□□□□□ -0.51
ECHDC1-216ENST00000479525 DNAH10OSP0CZ25 163 aa11.85□□□□□ -0.51
ECHDC1-216ENST00000479525 CDC34P49427 236 aaPredicted RBP11.85□□□□□ -0.51
ECHDC1-216ENST00000479525 TMEM75Q8N9X5 138 aa11.85□□□□□ -0.51
ECHDC1-216ENST00000479525 TREM1Q9NP99 234 aa11.85□□□□□ -0.51
ECHDC1-216ENST00000479525 ZNF80P51504 273 aaPredicted RBP11.84□□□□□ -0.51
ECHDC1-216ENST00000479525 MRPL23Q16540 153 aaKnown RBP11.84□□□□□ -0.51
ECHDC1-216ENST00000479525 PQLC2Q6ZP29 291 aa11.84□□□□□ -0.51
ECHDC1-216ENST00000479525 ATP6V0CP27449 155 aa11.83□□□□□ -0.52
ECHDC1-216ENST00000479525 SRIP30626 198 aa11.83□□□□□ -0.52
ECHDC1-216ENST00000479525 FAM74A1Q5RGS3 127 aa11.83□□□□□ -0.52
ECHDC1-216ENST00000479525 NEGR1Q7Z3B1 354 aa11.83□□□□□ -0.52
ECHDC1-216ENST00000479525 C11orf21Q9P2W6 132 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms