RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 ZNF575Q86XF7 245 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 AMN1Q8IY45 258 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 C20orf173Q96LM9 149 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 MIEN1Q9BRT3 115 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 NPFFR1Q9GZQ6 430 aa8.42□□□□□ -1.06
HLA-DMB-260ENST00000477537 MYO9AB2RTY4 2548 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 PRRC2AP48634 2157 aaKnown RBP8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 ITPR3Q14573 2671 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 RNF223E7ERA6 249 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 TWIST1Q15672 202 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 LINC01559Q495D7 138 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 SPATA45Q537H7 98 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 C9orf47Q6ZRZ4 202 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 ATOH7Q8N100 152 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 D6R8Y8 96 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 EREGO14944 169 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 RAB4AP20338 218 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 HIST1H1AQ02539 215 aaPredicted RBP8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 LINC00173Q6ZV60 143 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 ZNF738Q8NE65 137 aa8.41□□□□□ -1.06
HLA-DMB-260ENST00000477537 TEX15Q9BXT5 2789 aa8.4□□□□□ -1.06
HLA-DMB-260ENST00000477537 LEPROTL1O95214 131 aa8.4□□□□□ -1.06
HLA-DMB-260ENST00000477537 LOXL1Q08397 574 aaPredicted RBP8.4□□□□□ -1.06
HLA-DMB-260ENST00000477537 MRPL51Q4U2R6 128 aaKnown RBP8.4□□□□□ -1.06
HLA-DMB-260ENST00000477537 DMRTA1Q5VZB9 504 aa8.4□□□□□ -1.06
HLA-DMB-260ENST00000477537 SPATA12Q7Z6I5 190 aa8.4□□□□□ -1.06
HLA-DMB-260ENST00000477537 GPHB5Q86YW7 130 aa8.4□□□□□ -1.06
HLA-DMB-260ENST00000477537 PRELID3AQ96N28 172 aa8.4□□□□□ -1.06
HLA-DMB-260ENST00000477537 TMEM70Q9BUB7 260 aa8.4□□□□□ -1.06
HLA-DMB-260ENST00000477537 U3KQK5 164 aa8.4□□□□□ -1.06
HLA-DMB-260ENST00000477537 RPL11P62913 178 aaKnown RBP8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 TM4SF20Q53R12 229 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 FA2HQ7L5A8 372 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 PRSS3P2Q8NHM4 247 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 C11orf21Q9P2W6 132 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 ZNF580Q9UK33 172 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 FLNAP21333 2647 aaKnown RBP8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 CR1P17927 2039 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 IGKV3D-20A0A0C4DH25 116 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 IGHV7-4-1A0A0J9YVY3 117 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 LOC389332A0A1B0GUA5 103 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 A0A1B0GV90 55 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 SOCS3O14543 225 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 OR5AL1P0C617 328 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 IGHV4-31P0DP07 118 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 FOXE3Q13461 319 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 CYB5R2Q6BCY4 276 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 ORMDL3Q8N138 153 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 SNHG12Q9BXW3 62 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 MSRB1Q9NZV6 116 aa8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 PEF1Q9UBV8 284 aaKnown RBP8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 TIMM8BQ9Y5J9 83 aaPredicted RBP8.39□□□□□ -1.07
HLA-DMB-260ENST00000477537 SMKR1H3BMG3 65 aa8.38□□□□□ -1.07
HLA-DMB-260ENST00000477537 IFI27P40305 119 aaPredicted RBP8.38□□□□□ -1.07
HLA-DMB-260ENST00000477537 MAJINQ3KP22 176 aa8.38□□□□□ -1.07
HLA-DMB-260ENST00000477537 LBHQ53QV2 105 aaPredicted RBP8.38□□□□□ -1.07
HLA-DMB-260ENST00000477537 RHPN1-AS1Q9BWJ2 59 aa8.38□□□□□ -1.07
HLA-DMB-260ENST00000477537 PPP1R14DQ9NXH3 145 aa8.38□□□□□ -1.07
HLA-DMB-260ENST00000477537 SELENOKQ9Y6D0 94 aa8.38□□□□□ -1.07
HLA-DMB-260ENST00000477537 CREBBPQ92793 2442 aa8.38□□□□□ -1.07
HLA-DMB-260ENST00000477537 TLN2Q9Y4G6 2542 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 OTOGQ6ZRI0 2925 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 IGKV3-7A0A075B6H7 116 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 SYS1-DBNDD2H3BUS1 97 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 M0R143 59 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 PSMB8P28062 276 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 CKS2P33552 79 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 DEFB113Q30KQ7 82 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 C10orf99Q6UWK7 81 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 Q6ZQT7 251 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 OR10J6PQ8NGY7 276 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 CNFNQ9BYD5 112 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 TMEM191AQ9H0A3 160 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 DAZ1Q9NQZ3 744 aaKnown RBP8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 BEX4Q9NWD9 120 aaPredicted RBP8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 SIGLEC8Q9NYZ4 499 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 ACANP16112 2415 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 TRAV9-2A0A087WT02 112 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 OVOL1O14753 267 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 NCR2O95944 276 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 DEFB1P60022 68 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 Q5PR19 223 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 PRR9Q5T870 116 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 MAP1LC3CQ9BXW4 147 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 SMPXQ9UHP9 88 aa8.37□□□□□ -1.07
HLA-DMB-260ENST00000477537 J3KRW8 73 aa8.36□□□□□ -1.07
HLA-DMB-260ENST00000477537 CRXO43186 299 aaPredicted RBP8.36□□□□□ -1.07
HLA-DMB-260ENST00000477537 FSHBP01225 129 aa8.36□□□□□ -1.07
HLA-DMB-260ENST00000477537 IGLC3P0DOY3 106 aa8.36□□□□□ -1.07
HLA-DMB-260ENST00000477537 EDN2P20800 178 aa8.36□□□□□ -1.07
HLA-DMB-260ENST00000477537 FAM106AQ4KMX7 169 aa8.36□□□□□ -1.07
HLA-DMB-260ENST00000477537 KLHDC1Q8N7A1 406 aa8.36□□□□□ -1.07
HLA-DMB-260ENST00000477537 RNF185Q96GF1 192 aa8.36□□□□□ -1.07
HLA-DMB-260ENST00000477537 LINC00477Q96M19 166 aa8.36□□□□□ -1.07
HLA-DMB-260ENST00000477537 VPREB3Q9UKI3 123 aa8.36□□□□□ -1.07
HLA-DMB-260ENST00000477537 LENEPQ9Y5L5 61 aa8.36□□□□□ -1.07
HLA-DMB-260ENST00000477537 C20orf202A1L168 122 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms