RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.65□□□□□ -1.02
COL27A1-204ENST00000477421 H3BUT2 72 aa8.65□□□□□ -1.02
COL27A1-204ENST00000477421 IGHV1-69P01742 117 aa8.65□□□□□ -1.02
COL27A1-204ENST00000477421 DEFB1P60022 68 aa8.65□□□□□ -1.02
COL27A1-204ENST00000477421 C1orf159Q96HA4 380 aa8.65□□□□□ -1.02
COL27A1-204ENST00000477421 MSRB1Q9NZV6 116 aa8.65□□□□□ -1.02
COL27A1-204ENST00000477421 TRBV7-1A0A0A6YYK4 115 aa8.65□□□□□ -1.03
COL27A1-204ENST00000477421 RNF223E7ERA6 249 aa8.65□□□□□ -1.03
COL27A1-204ENST00000477421 PRB1P04280 392 aa8.65□□□□□ -1.03
COL27A1-204ENST00000477421 EMP1P54849 157 aa8.65□□□□□ -1.03
COL27A1-204ENST00000477421 DYNAPQ8N1N2 210 aa8.65□□□□□ -1.03
COL27A1-204ENST00000477421 C20orf144Q9BQM9 153 aa8.65□□□□□ -1.03
COL27A1-204ENST00000477421 MSMBP08118 114 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 CTSGP08311 255 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 PSMB2P49721 201 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 BLCAPP62952 87 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 C8orf86Q6ZUL3 223 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 TMEM158Q8WZ71 300 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 IGHV3-73A0A0B4J1V6 119 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 EGR2P11161 476 aaPredicted RBP8.64□□□□□ -1.03
COL27A1-204ENST00000477421 SYNJ2BPP57105 145 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 NXT2Q9NPJ8 142 aaKnown RBP8.64□□□□□ -1.03
COL27A1-204ENST00000477421 BEX4Q9NWD9 120 aaPredicted RBP8.64□□□□□ -1.03
COL27A1-204ENST00000477421 TMEM14CQ9P0S9 112 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 A0A087WWL8 130 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 ATP5LO75964 103 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 PPBPP02775 128 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 FAM104BQ5XKR9 115 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 RNF152Q8N8N0 203 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 SYT8Q8NBV8 401 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 LINC00574Q9H8X3 128 aa8.64□□□□□ -1.03
COL27A1-204ENST00000477421 LINC01548A6NM66 108 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 IGLV2-8P01709 118 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 FABP2P12104 132 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 MRPL51Q4U2R6 128 aaKnown RBP8.63□□□□□ -1.03
COL27A1-204ENST00000477421 ST20Q9HBF5 79 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 DOPEY1Q5JWR5 2465 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 NPYP01303 97 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 GATA1P15976 413 aaPredicted RBP8.63□□□□□ -1.03
COL27A1-204ENST00000477421 SRSF2Q01130 221 aaKnown RBP8.63□□□□□ -1.03
COL27A1-204ENST00000477421 NHP2Q9NX24 153 aaKnown RBP8.63□□□□□ -1.03
COL27A1-204ENST00000477421 IGKV3OR2-268A0A0C4DH90 116 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 PSMB11A5LHX3 300 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 IGHV4-38-2P0DP08 117 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 CT83Q5H943 113 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 LDLRAD2Q5SZI1 272 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 GFRA4Q9GZZ7 299 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 IGLV11-55A0A075B6I3 123 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 DLEU1O43261 78 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 Q8N9W7 124 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 PRSS22Q9GZN4 317 aa8.63□□□□□ -1.03
COL27A1-204ENST00000477421 PRAC2D3DTV9 90 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 C9orf139Q6ZV77 190 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 SMIM12Q96EX1 92 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 FANCD2OSQ96PS1 177 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 CENPVL3A0A0U1RRI6 287 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 IGHV4-39P01824 125 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 ZC2HC1BQ5TFG8 222 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 AMMECR1LQ6DCA0 310 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 PIP4P2Q8N4L2 257 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 DUX3Q96PT4 197 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 AGPAT4-IT1Q9H0P7 198 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 SIGLEC8Q9NYZ4 499 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 J3QR89 54 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 FOXE3Q13461 319 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 CD300EQ496F6 205 aaPredicted RBP8.62□□□□□ -1.03
COL27A1-204ENST00000477421 TTC9CQ8N5M4 171 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 CITED1Q99966 193 aa8.62□□□□□ -1.03
COL27A1-204ENST00000477421 FAM231BA6NCW3 169 aa8.61□□□□□ -1.03
COL27A1-204ENST00000477421 SRSF1Q07955 248 aaKnown RBP eCLIP8.61□□□□□ -1.031e-12■□□□□ 11
COL27A1-204ENST00000477421 TEX43Q6ZNM6 134 aa8.61□□□□□ -1.03
COL27A1-204ENST00000477421 PEF1Q9UBV8 284 aaKnown RBP8.61□□□□□ -1.03
COL27A1-204ENST00000477421 IGHV3-64A0A075B6Q5 118 aa8.61□□□□□ -1.03
COL27A1-204ENST00000477421 IGHV4-30-2A0A087WSY4 118 aa8.61□□□□□ -1.03
COL27A1-204ENST00000477421 APOMO95445 188 aa8.61□□□□□ -1.03
COL27A1-204ENST00000477421 CRYGCP07315 174 aa8.61□□□□□ -1.03
COL27A1-204ENST00000477421 NPSP0C0P6 89 aa8.61□□□□□ -1.03
COL27A1-204ENST00000477421 K7ERU9 68 aa8.61□□□□□ -1.03
COL27A1-204ENST00000477421 NEGR1Q7Z3B1 354 aa8.61□□□□□ -1.03
COL27A1-204ENST00000477421 TRAV12-2A0A075B6T6 113 aa8.6□□□□□ -1.03
COL27A1-204ENST00000477421 OVOL1O14753 267 aa8.6□□□□□ -1.03
COL27A1-204ENST00000477421 DPM2O94777 84 aa8.6□□□□□ -1.03
COL27A1-204ENST00000477421 GDF5OSQ5U4N7 250 aa8.6□□□□□ -1.03
COL27A1-204ENST00000477421 DAZ1Q9NQZ3 744 aaKnown RBP8.6□□□□□ -1.03
COL27A1-204ENST00000477421 C19orf84I3L1E1 186 aa8.6□□□□□ -1.03
COL27A1-204ENST00000477421 RAX2Q96IS3 184 aa8.6□□□□□ -1.03
COL27A1-204ENST00000477421 LINC00477Q96M19 166 aa8.6□□□□□ -1.03
COL27A1-204ENST00000477421 LINC01587Q99440 93 aa8.6□□□□□ -1.03
COL27A1-204ENST00000477421 IGKV3D-20A0A0C4DH25 116 aa8.6□□□□□ -1.03
COL27A1-204ENST00000477421 IGKCP01834 107 aa8.6□□□□□ -1.03
COL27A1-204ENST00000477421 ADGRG4Q8IZF6 3080 aa8.6□□□□□ -1.03
COL27A1-204ENST00000477421 CFAP47Q6ZTR5 3102 aa8.6□□□□□ -1.03
COL27A1-204ENST00000477421 PLP1P60201 277 aa8.59□□□□□ -1.03
COL27A1-204ENST00000477421 OR2K2Q8NGT1 345 aa8.59□□□□□ -1.03
COL27A1-204ENST00000477421 ADAMTS20P59510 1910 aa8.59□□□□□ -1.03
COL27A1-204ENST00000477421 SMIM13P0DJ93 91 aa8.59□□□□□ -1.03
COL27A1-204ENST00000477421 LAGE3Q14657 143 aa8.59□□□□□ -1.03
COL27A1-204ENST00000477421 SPINK13Q1W4C9 94 aa8.59□□□□□ -1.03
COL27A1-204ENST00000477421 PCSK5Q92824 1860 aa8.59□□□□□ -1.03
COL27A1-204ENST00000477421 TET2Q6N021 2002 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms