RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 NEU1Q99519 415 aa11.41□□□□□ -0.58
COPS3-207ENST00000477299 KLF12Q9Y4X4 402 aa11.41□□□□□ -0.58
COPS3-207ENST00000477299 SERTM2A0A1B0GWG4 89 aa11.4□□□□□ -0.58
COPS3-207ENST00000477299 K7EQM0 130 aa11.4□□□□□ -0.58
COPS3-207ENST00000477299 EMP1P54849 157 aa11.4□□□□□ -0.58
COPS3-207ENST00000477299 Q86TA4 180 aa11.4□□□□□ -0.58
COPS3-207ENST00000477299 NHLRC2Q8NBF2 726 aa11.4□□□□□ -0.58
COPS3-207ENST00000477299 TP53TG3Q9ULZ0 132 aa11.4□□□□□ -0.58
COPS3-207ENST00000477299 CELA1Q9UNI1 258 aa11.4□□□□□ -0.58
COPS3-207ENST00000477299 LENEPQ9Y5L5 61 aa11.4□□□□□ -0.58
COPS3-207ENST00000477299 TRBV7-9A0A0J9YWB2 115 aa11.39□□□□□ -0.59
COPS3-207ENST00000477299 PLAC8L1A1L4L8 177 aa11.39□□□□□ -0.59
COPS3-207ENST00000477299 RBFOX3A6NFN3 312 aa11.39□□□□□ -0.59
COPS3-207ENST00000477299 MIFP14174 115 aa11.39□□□□□ -0.59
COPS3-207ENST00000477299 AKR1C3P42330 323 aa11.39□□□□□ -0.59
COPS3-207ENST00000477299 MEF2BQ02080 365 aaPredicted RBP11.39□□□□□ -0.59
COPS3-207ENST00000477299 MUC21Q5SSG8 566 aa11.39□□□□□ -0.59
COPS3-207ENST00000477299 C11orf21Q9P2W6 132 aa11.39□□□□□ -0.59
COPS3-207ENST00000477299 VAX2Q9UIW0 290 aa11.39□□□□□ -0.59
COPS3-207ENST00000477299 RAB19A4D1S5 217 aa11.38□□□□□ -0.59
COPS3-207ENST00000477299 H7BYZ3 331 aa11.38□□□□□ -0.59
COPS3-207ENST00000477299 IFNA1P01562 189 aa11.38□□□□□ -0.59
COPS3-207ENST00000477299 CRIP1P50238 77 aa11.38□□□□□ -0.59
COPS3-207ENST00000477299 TMEM183BQ1AE95 376 aa11.38□□□□□ -0.59
COPS3-207ENST00000477299 RRN3P1Q2M238 152 aa11.38□□□□□ -0.59
COPS3-207ENST00000477299 ZNF767PQ75MW2 155 aa11.38□□□□□ -0.59
COPS3-207ENST00000477299 NIPSNAP3BQ9BS92 247 aa11.38□□□□□ -0.59
COPS3-207ENST00000477299 SMIM9A6NGZ8 99 aa11.37□□□□□ -0.59
COPS3-207ENST00000477299 GCGP01275 180 aa11.37□□□□□ -0.59
COPS3-207ENST00000477299 TAS2R60P59551 318 aa11.37□□□□□ -0.59
COPS3-207ENST00000477299 NANOS2P60321 138 aaKnown RBP11.37□□□□□ -0.59
COPS3-207ENST00000477299 SRSF3P84103 164 aaKnown RBP11.37□□□□□ -0.59
COPS3-207ENST00000477299 TOR2AQ5JU69 321 aa11.37□□□□□ -0.59
COPS3-207ENST00000477299 Q6AWC8 147 aa11.37□□□□□ -0.59
COPS3-207ENST00000477299 TMEM256Q8N2U0 113 aa11.37□□□□□ -0.59
COPS3-207ENST00000477299 C11orf52Q96A22 123 aa11.37□□□□□ -0.59
COPS3-207ENST00000477299 ZC2HC1AQ96GY0 325 aa11.37□□□□□ -0.59
COPS3-207ENST00000477299 FMC1Q96HJ9 113 aa11.37□□□□□ -0.59
COPS3-207ENST00000477299 C20orf144Q9BQM9 153 aa11.37□□□□□ -0.59
COPS3-207ENST00000477299 LTAP01374 205 aa11.36□□□□□ -0.59
COPS3-207ENST00000477299 RPL35P42766 123 aaKnown RBP11.36□□□□□ -0.59
COPS3-207ENST00000477299 UBE2G1P62253 170 aa11.36□□□□□ -0.59
COPS3-207ENST00000477299 ZNF506Q5JVG8 444 aa11.36□□□□□ -0.59
COPS3-207ENST00000477299 IL17DQ8TAD2 202 aa11.36□□□□□ -0.59
COPS3-207ENST00000477299 FAM210AQ96ND0 272 aa11.36□□□□□ -0.59
COPS3-207ENST00000477299 WWC2-AS2Q96NR7 200 aa11.36□□□□□ -0.59
COPS3-207ENST00000477299 TCEAL7Q9BRU2 100 aa11.36□□□□□ -0.59
COPS3-207ENST00000477299 C11orf68Q9H3H3 251 aaKnown RBP11.36□□□□□ -0.59
COPS3-207ENST00000477299 MED9Q9NWA0 146 aa11.36□□□□□ -0.59
COPS3-207ENST00000477299 IGHV1OR15-1A0A075B7D0 117 aa11.35□□□□□ -0.59
COPS3-207ENST00000477299 TRBV6-1A0A0K0K1D8 114 aa11.35□□□□□ -0.59
COPS3-207ENST00000477299 PGPEP1LA6NFU8 196 aa11.35□□□□□ -0.59
COPS3-207ENST00000477299 GNRH2O43555 120 aa11.35□□□□□ -0.59
COPS3-207ENST00000477299 SMUG1Q53HV7 270 aa11.35□□□□□ -0.59
COPS3-207ENST00000477299 SAPCD1Q5SSQ6 148 aa11.35□□□□□ -0.59
COPS3-207ENST00000477299 RNASE8Q8TDE3 154 aaKnown RBP11.35□□□□□ -0.59
COPS3-207ENST00000477299 NDFIP1Q9BT67 221 aa11.35□□□□□ -0.59
COPS3-207ENST00000477299 NAGKQ9UJ70 344 aa11.35□□□□□ -0.59
COPS3-207ENST00000477299 TRBV20OR9-2A0A075B6H5 130 aa11.34□□□□□ -0.59
COPS3-207ENST00000477299 FBLL1A6NHQ2 334 aaKnown RBP11.34□□□□□ -0.59
COPS3-207ENST00000477299 C9JQL5 133 aa11.34□□□□□ -0.59
COPS3-207ENST00000477299 RGS13O14921 159 aa11.34□□□□□ -0.59
COPS3-207ENST00000477299 IGLV2-8P01709 118 aa11.34□□□□□ -0.59
COPS3-207ENST00000477299 ANXA2RQ3ZCQ2 193 aa11.34□□□□□ -0.59
COPS3-207ENST00000477299 EIF4E3Q8N5X7 224 aaKnown RBP11.34□□□□□ -0.59
COPS3-207ENST00000477299 TXNDC17Q9BRA2 123 aa11.34□□□□□ -0.59
COPS3-207ENST00000477299 PYGO2Q9BRQ0 406 aa11.34□□□□□ -0.59
COPS3-207ENST00000477299 EIF5A2Q9GZV4 153 aaKnown RBP11.34□□□□□ -0.59
COPS3-207ENST00000477299 CSMD3Q7Z407 3707 aa11.34□□□□□ -0.59
COPS3-207ENST00000477299 MUC4Q99102 2169 aa11.33□□□□□ -0.6
COPS3-207ENST00000477299 CBY3A6NI87 242 aa11.33□□□□□ -0.6
COPS3-207ENST00000477299 PDE6DO43924 150 aa11.33□□□□□ -0.6
COPS3-207ENST00000477299 FAM222AQ5U5X8 452 aa11.33□□□□□ -0.6
COPS3-207ENST00000477299 BAGE2Q86Y30 109 aa11.33□□□□□ -0.6
COPS3-207ENST00000477299 C11orf72Q8NBR9 251 aa11.33□□□□□ -0.6
COPS3-207ENST00000477299 MLST8Q9BVC4 326 aa11.33□□□□□ -0.6
COPS3-207ENST00000477299 GSN-AS1Q9NRJ2 163 aa11.33□□□□□ -0.6
COPS3-207ENST00000477299 MDFICQ9P1T7 246 aa11.33□□□□□ -0.6
COPS3-207ENST00000477299 DKK2Q9UBU2 259 aa11.33□□□□□ -0.6
COPS3-207ENST00000477299 ZFP30Q9Y2G7 519 aa11.33□□□□□ -0.6
COPS3-207ENST00000477299 TRAV21A0A0B4J279 112 aa11.32□□□□□ -0.6
COPS3-207ENST00000477299 SRP19P09132 144 aaKnown RBP11.32□□□□□ -0.6
COPS3-207ENST00000477299 C12orf74Q32Q52 190 aa11.32□□□□□ -0.6
COPS3-207ENST00000477299 CENPWQ5EE01 88 aa11.32□□□□□ -0.6
COPS3-207ENST00000477299 ZFAND6Q6FIF0 208 aa11.32□□□□□ -0.6
COPS3-207ENST00000477299 ZNF575Q86XF7 245 aa11.32□□□□□ -0.6
COPS3-207ENST00000477299 TMEM183AQ8IXX5 376 aa11.32□□□□□ -0.6
COPS3-207ENST00000477299 C11orf45Q8TAV5 145 aa11.32□□□□□ -0.6
COPS3-207ENST00000477299 TMEM263Q8WUH6 116 aaKnown RBP11.32□□□□□ -0.6
COPS3-207ENST00000477299 LINC00467Q9BRT7 94 aa11.32□□□□□ -0.6
COPS3-207ENST00000477299 NOP10Q9NPE3 64 aaKnown RBP11.32□□□□□ -0.6
COPS3-207ENST00000477299 IGKV3D-20A0A0C4DH25 116 aa11.31□□□□□ -0.6
COPS3-207ENST00000477299 CXorf65A6NEN9 183 aa11.31□□□□□ -0.6
COPS3-207ENST00000477299 SH2D1AO60880 128 aa11.31□□□□□ -0.6
COPS3-207ENST00000477299 S100A9P06702 114 aaKnown RBP11.31□□□□□ -0.6
COPS3-207ENST00000477299 PFN1P07737 140 aaKnown RBP11.31□□□□□ -0.6
COPS3-207ENST00000477299 CEBPGP53567 150 aa11.31□□□□□ -0.6
COPS3-207ENST00000477299 COX8CQ7Z4L0 72 aa11.31□□□□□ -0.6
COPS3-207ENST00000477299 C16orf74Q96GX8 76 aa11.31□□□□□ -0.6
COPS3-207ENST00000477299 TYMSP04818 313 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms