RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 RPL18AQ02543 176 aaKnown RBP14.75□□□□□ -0.05
VARS2-209ENST00000477288 Q0VG73 95 aa14.75□□□□□ -0.05
VARS2-209ENST00000477288 ELANEP08246 267 aa14.75□□□□□ -0.05
VARS2-209ENST00000477288 ZNF134P52741 427 aa14.75□□□□□ -0.05
VARS2-209ENST00000477288 SLAQ13239 276 aa14.75□□□□□ -0.05
VARS2-209ENST00000477288 DEFB112Q30KQ8 113 aa14.75□□□□□ -0.05
VARS2-209ENST00000477288 HERVK_113P63121 156 aa14.75□□□□□ -0.05
VARS2-209ENST00000477288 LRRK1Q38SD2 2015 aa14.74□□□□□ -0.05
VARS2-209ENST00000477288 WDR86Q86TI4 376 aa14.74□□□□□ -0.05
VARS2-209ENST00000477288 DIAPH2-AS1Q14236 149 aa14.74□□□□□ -0.05
VARS2-209ENST00000477288 LY6G6EA0A0G2JKS1 128 aa14.74□□□□□ -0.05
VARS2-209ENST00000477288 U3KQA8 63 aa14.74□□□□□ -0.05
VARS2-209ENST00000477288 FANCMQ8IYD8 2048 aa14.73□□□□□ -0.05
VARS2-209ENST00000477288 IGHV4-59P01825 116 aa14.73□□□□□ -0.05
VARS2-209ENST00000477288 NDUFS6O75380 124 aaKnown RBP14.73□□□□□ -0.05
VARS2-209ENST00000477288 LYL1P12980 280 aa14.73□□□□□ -0.05
VARS2-209ENST00000477288 TTC28Q96AY4 2481 aa14.73□□□□□ -0.05
VARS2-209ENST00000477288 CFHR4Q92496 578 aa14.73□□□□□ -0.05
VARS2-209ENST00000477288 MRPL35Q9NZE8 188 aaKnown RBP14.73□□□□□ -0.05
VARS2-209ENST00000477288 TRACP01848 142 aa14.72□□□□□ -0.05
VARS2-209ENST00000477288 NBL1P41271 181 aa14.72□□□□□ -0.05
VARS2-209ENST00000477288 PPDPFLQ8WWR9 84 aa14.72□□□□□ -0.05
VARS2-209ENST00000477288 ZNF503-AS2A6NEH8 195 aa14.72□□□□□ -0.05
VARS2-209ENST00000477288 OR11H6Q8NGC7 330 aa14.72□□□□□ -0.05
VARS2-209ENST00000477288 YLPM1P49750 1951 aaKnown RBP14.72□□□□□ -0.05
VARS2-209ENST00000477288 C9orf118A6NHY6 69 aa14.72□□□□□ -0.05
VARS2-209ENST00000477288 CCL24O00175 119 aa14.72□□□□□ -0.05
VARS2-209ENST00000477288 ADCYAP1P18509 176 aa14.72□□□□□ -0.05
VARS2-209ENST00000477288 PROK2Q9HC23 129 aa14.72□□□□□ -0.05
VARS2-209ENST00000477288 SIGLEC8Q9NYZ4 499 aa14.72□□□□□ -0.05
VARS2-209ENST00000477288 ABCA4P78363 2273 aa14.72□□□□□ -0.05
VARS2-209ENST00000477288 WIPF3A6NGB9 483 aa14.71□□□□□ -0.05
VARS2-209ENST00000477288 DEFB136Q30KP8 78 aa14.71□□□□□ -0.05
VARS2-209ENST00000477288 PLA2G2CQ5R387 149 aa14.71□□□□□ -0.05
VARS2-209ENST00000477288 NPYP01303 97 aa14.71□□□□□ -0.05
VARS2-209ENST00000477288 VPREB3Q9UKI3 123 aa14.71□□□□□ -0.05
VARS2-209ENST00000477288 HEATR1Q9H583 2144 aaKnown RBP14.71□□□□□ -0.05
VARS2-209ENST00000477288 HOXB4P17483 251 aaPredicted RBP14.71□□□□□ -0.05
VARS2-209ENST00000477288 ZC2HC1AQ96GY0 325 aa14.71□□□□□ -0.05
VARS2-209ENST00000477288 MGAMO43451 1857 aa14.71□□□□□ -0.05
VARS2-209ENST00000477288 PRO1854Q9UHT4 67 aa14.71□□□□□ -0.05
VARS2-209ENST00000477288 FAM215AQ9Y5M1 114 aa14.71□□□□□ -0.05
VARS2-209ENST00000477288 LINC00311Q8N616 119 aa14.71□□□□□ -0.06
VARS2-209ENST00000477288 PRSS33Q8NF86 280 aa14.71□□□□□ -0.06
VARS2-209ENST00000477288 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.7□□□□□ -0.06
VARS2-209ENST00000477288 IGKV2-29A2NJV5 120 aaPredicted RBP14.7□□□□□ -0.06
VARS2-209ENST00000477288 NDUFS7O75251 213 aa14.7□□□□□ -0.06
VARS2-209ENST00000477288 MAJINQ3KP22 176 aa14.7□□□□□ -0.06
VARS2-209ENST00000477288 C5orf47Q569G3 176 aa14.7□□□□□ -0.06
VARS2-209ENST00000477288 U3KQE9 123 aa14.7□□□□□ -0.06
VARS2-209ENST00000477288 K7ERJ3 54 aa14.7□□□□□ -0.06
VARS2-209ENST00000477288 F6UB75 175 aa14.7□□□□□ -0.06
VARS2-209ENST00000477288 WT1-ASQ06250 92 aa14.7□□□□□ -0.06
VARS2-209ENST00000477288 RHOHQ15669 191 aa14.7□□□□□ -0.06
VARS2-209ENST00000477288 MRPL53Q96EL3 112 aaKnown RBP14.7□□□□□ -0.06
VARS2-209ENST00000477288 ARFGEF3Q5TH69 2177 aa14.7□□□□□ -0.06
VARS2-209ENST00000477288 CEND1Q8N111 149 aa14.69□□□□□ -0.06
VARS2-209ENST00000477288 PRB2P02812 416 aaPredicted RBP14.69□□□□□ -0.06
VARS2-209ENST00000477288 MRPL52Q86TS9 123 aaKnown RBP14.69□□□□□ -0.06
VARS2-209ENST00000477288 J3QQQ9 107 aa14.69□□□□□ -0.06
VARS2-209ENST00000477288 IGHV4-28A0A0C4DH34 117 aa14.69□□□□□ -0.06
VARS2-209ENST00000477288 GNRH2O43555 120 aa14.69□□□□□ -0.06
VARS2-209ENST00000477288 IFITM1P13164 125 aa14.69□□□□□ -0.06
VARS2-209ENST00000477288 TEX48A0A1B0GUV7 120 aa14.69□□□□□ -0.06
VARS2-209ENST00000477288 BUB3O43684 328 aa14.69□□□□□ -0.06
VARS2-209ENST00000477288 ETDBQ3ZM63 59 aa14.68□□□□□ -0.06
VARS2-209ENST00000477288 BOD1L2Q8IYS8 172 aa14.68□□□□□ -0.06
VARS2-209ENST00000477288 WDR81Q562E7 1941 aa14.68□□□□□ -0.06
VARS2-209ENST00000477288 SHISA9B4DS77 424 aa14.68□□□□□ -0.06
VARS2-209ENST00000477288 VOPP1Q96AW1 172 aa14.68□□□□□ -0.06
VARS2-209ENST00000477288 CITED1Q99966 193 aa14.68□□□□□ -0.06
VARS2-209ENST00000477288 NCOR1P1Q9H4R4 102 aa14.68□□□□□ -0.06
VARS2-209ENST00000477288 IGHV2-5P01817 119 aa14.68□□□□□ -0.06
VARS2-209ENST00000477288 GRNP28799 593 aaKnown RBP14.68□□□□□ -0.06
VARS2-209ENST00000477288 DEFB113Q30KQ7 82 aa14.68□□□□□ -0.06
VARS2-209ENST00000477288 WNK2Q9Y3S1 2297 aa14.67□□□□□ -0.06
VARS2-209ENST00000477288 EGR2P11161 476 aaPredicted RBP14.67□□□□□ -0.06
VARS2-209ENST00000477288 TMEM14CQ9P0S9 112 aa14.67□□□□□ -0.06
VARS2-209ENST00000477288 IGLV1-44P01699 117 aa14.67□□□□□ -0.06
VARS2-209ENST00000477288 FHL1Q13642 323 aa14.67□□□□□ -0.06
VARS2-209ENST00000477288 FOXI2Q6ZQN5 318 aa14.67□□□□□ -0.06
VARS2-209ENST00000477288 HLA-DMBP28068 263 aa14.67□□□□□ -0.06
VARS2-209ENST00000477288 C9JQL5 133 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 CRYBA4P53673 196 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 TIMM17AQ99595 171 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 ABCA1O95477 2261 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 GBF1Q92538 1859 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 SMIM27A0A1W2PRY6 76 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 C9orf66Q5T8R8 295 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 C15orf53Q8NAA6 179 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 V9GYV3 84 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 CHKB-CPT1BH3BT56 60 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 TP53BP1Q12888 1972 aaPredicted RBP14.66□□□□□ -0.06
VARS2-209ENST00000477288 APRG1Q8IVJ8 170 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 C1orf43Q9BWL3 253 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 ETDCA0A1B0GVM5 59 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 C15orf65H3BRN8 121 aa14.66□□□□□ -0.06
VARS2-209ENST00000477288 ZNF407Q9C0G0 2248 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 IGLC2P0DOY2 106 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 IGLC3P0DOY3 106 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms