RNA–Protein interactions for RNA: ENST00000477215.5

SYCP1-205, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-205ENST00000477215 SMG6Q86US8 1419 aaKnown RBP-1.17□□□□□ -2.6
SYCP1-205ENST00000477215 KNL1Q8NG31 2342 aa-1.17□□□□□ -2.6
SYCP1-205ENST00000477215 LAMB1P07942 1786 aa-1.18□□□□□ -2.6
SYCP1-205ENST00000477215 MYLKQ15746 1914 aa-1.18□□□□□ -2.6
SYCP1-205ENST00000477215 H0YAA0 97 aa-1.18□□□□□ -2.6
SYCP1-205ENST00000477215 TAX1BP3O14907 124 aa-1.18□□□□□ -2.6
SYCP1-205ENST00000477215 PDE6DO43924 150 aa-1.18□□□□□ -2.6
SYCP1-205ENST00000477215 PDE6GP18545 87 aa-1.18□□□□□ -2.6
SYCP1-205ENST00000477215 Q5VSD8 79 aa-1.18□□□□□ -2.6
SYCP1-205ENST00000477215 POPDC3Q9HBV1 291 aa-1.18□□□□□ -2.6
SYCP1-205ENST00000477215 USF3Q68DE3 2245 aa-1.18□□□□□ -2.6
SYCP1-205ENST00000477215 GOLGB1Q14789 3259 aaKnown RBP-1.19□□□□□ -2.6
SYCP1-205ENST00000477215 A0A087WUJ7 227 aa-1.19□□□□□ -2.6
SYCP1-205ENST00000477215 IGHV3-33P01772 117 aa-1.19□□□□□ -2.6
SYCP1-205ENST00000477215 ZNF56Q15929 161 aa-1.19□□□□□ -2.6
SYCP1-205ENST00000477215 COL24A1Q17RW2 1714 aa-1.19□□□□□ -2.6
SYCP1-205ENST00000477215 C5orf17Q8NAS9 161 aa-1.19□□□□□ -2.6
SYCP1-205ENST00000477215 A6NN06 94 aa-1.2□□□□□ -2.6
SYCP1-205ENST00000477215 TMEM256-PLSCR3K7ERE1 68 aa-1.2□□□□□ -2.6
SYCP1-205ENST00000477215 HAND1O96004 215 aa-1.2□□□□□ -2.6
SYCP1-205ENST00000477215 TPM3P06753 285 aa-1.2□□□□□ -2.6
SYCP1-205ENST00000477215 ASIPP42127 132 aa-1.2□□□□□ -2.6
SYCP1-205ENST00000477215 OMPP47874 163 aa-1.2□□□□□ -2.6
SYCP1-205ENST00000477215 SERPINB9P50453 376 aa-1.2□□□□□ -2.6
SYCP1-205ENST00000477215 KRTAP19-5Q3LI72 72 aa-1.2□□□□□ -2.6
SYCP1-205ENST00000477215 XAF1Q6GPH4 301 aa-1.2□□□□□ -2.6
SYCP1-205ENST00000477215 ZNF714Q96N38 554 aa-1.2□□□□□ -2.6
SYCP1-205ENST00000477215 TRIM4Q9C037 500 aa-1.2□□□□□ -2.6
SYCP1-205ENST00000477215 ATP6V1DQ9Y5K8 247 aa-1.2□□□□□ -2.6
SYCP1-205ENST00000477215 CEP250Q9BV73 2442 aa-1.21□□□□□ -2.6
SYCP1-205ENST00000477215 A0A0J9YY99 117 aa-1.21□□□□□ -2.6
SYCP1-205ENST00000477215 hDV103S1A0JD37 113 aa-1.21□□□□□ -2.6
SYCP1-205ENST00000477215 FAM25EA8MYX2 175 aa-1.21□□□□□ -2.6
SYCP1-205ENST00000477215 M0R036 132 aa-1.21□□□□□ -2.6
SYCP1-205ENST00000477215 GGCTO75223 188 aaKnown RBP-1.21□□□□□ -2.6
SYCP1-205ENST00000477215 ERP29P30040 261 aaKnown RBP-1.21□□□□□ -2.6
SYCP1-205ENST00000477215 DYNLT3P51808 116 aa-1.21□□□□□ -2.6
SYCP1-205ENST00000477215 MAGOHP61326 146 aaKnown RBP-1.21□□□□□ -2.6
SYCP1-205ENST00000477215 MIR22HGQ0VDD5 57 aa-1.21□□□□□ -2.6
SYCP1-205ENST00000477215 ASXL1Q8IXJ9 1541 aa-1.21□□□□□ -2.6
SYCP1-205ENST00000477215 RPS3P23396 243 aaKnown RBP eCLIP-1.22□□□□□ -2.6
SYCP1-205ENST00000477215 FOXI2Q6ZQN5 318 aa-1.22□□□□□ -2.6
SYCP1-205ENST00000477215 ZHX1-C8orf76Q96EF9 292 aa-1.22□□□□□ -2.6
SYCP1-205ENST00000477215 ARL5BQ96KC2 179 aa-1.22□□□□□ -2.6
SYCP1-205ENST00000477215 LINC00208Q96KT6 92 aa-1.22□□□□□ -2.6
SYCP1-205ENST00000477215 PRELID3BQ9Y3B1 194 aa-1.22□□□□□ -2.6
SYCP1-205ENST00000477215 TRAV4A0A0B4J268 109 aa-1.23□□□□□ -2.61
SYCP1-205ENST00000477215 TNFP01375 233 aa-1.23□□□□□ -2.61
SYCP1-205ENST00000477215 TPM4P67936 248 aa-1.23□□□□□ -2.61
SYCP1-205ENST00000477215 AESQ08117 197 aa-1.23□□□□□ -2.61
SYCP1-205ENST00000477215 IMUPQ9GZP8 106 aa-1.23□□□□□ -2.61
SYCP1-205ENST00000477215 LAMC3Q9Y6N6 1575 aa-1.23□□□□□ -2.61
SYCP1-205ENST00000477215 F5P12259 2224 aa-1.23□□□□□ -2.61
SYCP1-205ENST00000477215 FMN2Q9NZ56 1722 aa-1.23□□□□□ -2.61
SYCP1-205ENST00000477215 DUXBA0A1W2PPF3 345 aa-1.24□□□□□ -2.61
SYCP1-205ENST00000477215 A0A1W2PRS3 328 aa-1.24□□□□□ -2.61
SYCP1-205ENST00000477215 IMPG1Q17R60 797 aa-1.24□□□□□ -2.61
SYCP1-205ENST00000477215 KRTAP19-2Q3LHN2 52 aa-1.24□□□□□ -2.61
SYCP1-205ENST00000477215 TEX37Q96LM6 180 aa-1.24□□□□□ -2.61
SYCP1-205ENST00000477215 LINC00846Q9NV44 126 aa-1.24□□□□□ -2.61
SYCP1-205ENST00000477215 NAT8BQ9UHF3 227 aa-1.24□□□□□ -2.61
SYCP1-205ENST00000477215 M0QX08 132 aa-1.25□□□□□ -2.61
SYCP1-205ENST00000477215 EVI2AP22794 236 aa-1.25□□□□□ -2.61
SYCP1-205ENST00000477215 ATP5G3P48201 142 aa-1.25□□□□□ -2.61
SYCP1-205ENST00000477215 MAP3K5Q99683 1374 aa-1.25□□□□□ -2.61
SYCP1-205ENST00000477215 DOCK4Q8N1I0 1966 aa-1.26□□□□□ -2.61
SYCP1-205ENST00000477215 MYL6P60660 151 aa-1.26□□□□□ -2.61
SYCP1-205ENST00000477215 H3F3AP84243 136 aa-1.26□□□□□ -2.61
SYCP1-205ENST00000477215 KLRD1Q13241 179 aa-1.26□□□□□ -2.61
SYCP1-205ENST00000477215 LLPHQ9BRT6 129 aaKnown RBP-1.26□□□□□ -2.61
SYCP1-205ENST00000477215 PARD6GQ9BYG4 376 aaPredicted RBP-1.26□□□□□ -2.61
SYCP1-205ENST00000477215 PIK3C2GO75747 1445 aa-1.26□□□□□ -2.61
SYCP1-205ENST00000477215 CDC42BPGQ6DT37 1551 aa-1.26□□□□□ -2.61
SYCP1-205ENST00000477215 NUP98P52948 1817 aa-1.26□□□□□ -2.61
SYCP1-205ENST00000477215 TRBV19A0A075B6N1 114 aa-1.27□□□□□ -2.61
SYCP1-205ENST00000477215 K7EQZ3 153 aa-1.27□□□□□ -2.61
SYCP1-205ENST00000477215 EDDM3AQ14507 147 aa-1.27□□□□□ -2.61
SYCP1-205ENST00000477215 VMA21Q3ZAQ7 101 aa-1.27□□□□□ -2.61
SYCP1-205ENST00000477215 TRAPPC5Q8IUR0 188 aa-1.27□□□□□ -2.61
SYCP1-205ENST00000477215 OTUD6BQ8N6M0 293 aa-1.27□□□□□ -2.61
SYCP1-205ENST00000477215 CACYBPQ9HB71 228 aaKnown RBP-1.27□□□□□ -2.61
SYCP1-205ENST00000477215 ENY2Q9NPA8 101 aa-1.27□□□□□ -2.61
SYCP1-205ENST00000477215 KIF1BO60333 1816 aa-1.28□□□□□ -2.61
SYCP1-205ENST00000477215 COL4A6Q14031 1691 aa-1.28□□□□□ -2.61
SYCP1-205ENST00000477215 IFNA7P01567 189 aa-1.28□□□□□ -2.61
SYCP1-205ENST00000477215 IGHV3-30P01768 117 aa-1.28□□□□□ -2.61
SYCP1-205ENST00000477215 IGHV3-30-5P0DP03 117 aa-1.28□□□□□ -2.61
SYCP1-205ENST00000477215 HIST1H3AP68431 136 aa-1.28□□□□□ -2.61
SYCP1-205ENST00000477215 DIAPH2-AS1Q14236 149 aa-1.28□□□□□ -2.61
SYCP1-205ENST00000477215 NEDD8Q15843 81 aa-1.28□□□□□ -2.61
SYCP1-205ENST00000477215 GNPDA2Q8TDQ7 276 aa-1.28□□□□□ -2.61
SYCP1-205ENST00000477215 TSC2P49815 1807 aa-1.29□□□□□ -2.62
SYCP1-205ENST00000477215 SYNJ1O43426 1573 aa-1.29□□□□□ -2.62
SYCP1-205ENST00000477215 CEP164Q9UPV0 1460 aa-1.29□□□□□ -2.62
SYCP1-205ENST00000477215 LYRM1O43325 122 aa-1.29□□□□□ -2.62
SYCP1-205ENST00000477215 CFDP00746 253 aaPredicted RBP-1.29□□□□□ -2.62
SYCP1-205ENST00000477215 COX6A2Q02221 97 aa-1.29□□□□□ -2.62
SYCP1-205ENST00000477215 GOLT1AQ6ZVE7 132 aa-1.29□□□□□ -2.62
SYCP1-205ENST00000477215 IFT20Q8IY31 132 aa-1.29□□□□□ -2.62
SYCP1-205ENST00000477215 CCDC42Q96M95 316 aa-1.29□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms