RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 EFNA4P52798 201 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 TMEM30BQ3MIR4 351 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 LINC01620Q4KN68 170 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 TMEM155Q4W5P6 130 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 ZNF497Q6ZNH5 498 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 SDIM1Q6ZPB5 146 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 RNF144BQ7Z419 303 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 GTSCR1Q86UQ5 136 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 NDUFA11Q86Y39 141 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 ORMDL3Q8N138 153 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 C3orf56Q8N813 242 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 NABP1Q96AH0 204 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 FAM19A4Q96LR4 140 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 DCTN5Q9BTE1 182 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 CALYQ9NYX4 217 aa3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 KLK5Q9Y337 293 aaPredicted RBP3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 AMMECR1Q9Y4X0 333 aaPredicted RBP3.38□□□□□ -1.87
PIKFYVE-209ENST00000477200 SPTBP11277 2137 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 PTPRSQ13332 1948 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 TRAV12-1A0A0B4J245 112 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 IGKV1-8A0A0C4DH67 115 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 A0A1W2PQD3 144 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 C4orf51C9J302 202 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 PRSS46E5RG02 174 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 H0YIG0 161 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 M0R135 149 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 UPK2O00526 184 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 OXTP01178 125 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 IGKV1D-16P01601 117 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 CT62P0C5K7 136 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 GP1BBP13224 206 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 LIFP15018 202 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 SLC25A16P16260 332 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 ATP5EP56381 51 aaPredicted RBP3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 RPL18AQ02543 176 aaKnown RBP3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 ZC2HC1BQ5TFG8 222 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 MIC13Q5XKP0 118 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 ZFP2Q6ZN57 461 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 MDS2Q8NDY4 140 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 BORCS8Q96FH0 119 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 FMC1Q96HJ9 113 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 UPK3BQ9BT76 320 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 RTL8AQ9BWD3 113 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 DPH3P1Q9H4G8 78 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 DEPPQ9NTK1 212 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 PRO1854Q9UHT4 67 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 FREM3P0C091 2139 aa3.37□□□□□ -1.87
PIKFYVE-209ENST00000477200 PTPRBP23467 1997 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 PHF3Q92576 2039 aaKnown RBP3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 TMSB15BA0A087X1C1 80 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 A0A0B4J2C4 111 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 TRGV8A0A0C4DH27 118 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 hADV29S1A0JD25 119 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 MRPS12O15235 138 aaKnown RBP3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 BCE1O60756 84 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 FCGR3BO75015 233 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 IGHG2P01859 326 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 CDAP32320 146 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 IFI27P40305 119 aaPredicted RBP3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 CCL11P51671 97 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 ZNF138P52744 262 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 DLX1P56177 255 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 BRWD1-AS2P59051 145 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 HERVK_113P61574 105 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 SRSF9Q13242 221 aaKnown RBP eCLIP3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 STHQ8IWL8 128 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 LINC00311Q8N616 119 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 SPTSSAQ969W0 71 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 PGLYRP4Q96LB8 373 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 METTL26Q96S19 204 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 PEMTQ9UBM1 199 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 GOLGA4Q13439 2230 aaKnown RBP3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 SCN10AQ9Y5Y9 1956 aa3.36□□□□□ -1.87
PIKFYVE-209ENST00000477200 PCDH15Q96QU1 1955 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 IGKV1-6A0A0C4DH72 117 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 TRBV30A0A0K0K1B3 111 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 C5orf63A6NC05 138 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 CCL16O15467 120 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 SPINT2O43291 252 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 NGFP01138 241 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 PRSS1P07477 247 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 FKBP2P26885 142 aaKnown RBP3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 MYCNOSP40205 109 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 FGF12P61328 243 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 PCBD1P61457 104 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 IGLV3-21P80748 117 aaPredicted RBP3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 LPAL2Q16609 132 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 PIGYQ3MUY2 71 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 ZNF542PQ5EBM4 170 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 FAM104BQ5XKR9 115 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 C2orf82Q6UX34 121 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 MIR17HGQ75NE6 70 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 MDP1Q86V88 176 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 MAPKAPK5-AS1Q8N8E1 139 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 Q8N8P6 123 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 DAND5Q8N907 189 aa3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 TSACCQ96A04 125 aaPredicted RBP3.35□□□□□ -1.87
PIKFYVE-209ENST00000477200 DSCR8Q96T75 97 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms