RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 H3BUA1 57 aa12.63□□□□□ -0.39
TMEM53-208ENST00000476724 TRGV3P03979 118 aa12.63□□□□□ -0.39
TMEM53-208ENST00000476724 ZNF25P17030 456 aaPredicted RBP12.63□□□□□ -0.39
TMEM53-208ENST00000476724 IFI27P40305 119 aaPredicted RBP12.63□□□□□ -0.39
TMEM53-208ENST00000476724 ZNF575Q86XF7 245 aa12.63□□□□□ -0.39
TMEM53-208ENST00000476724 RNF182Q8N6D2 247 aa12.63□□□□□ -0.39
TMEM53-208ENST00000476724 MS4A6AQ9H2W1 248 aa12.63□□□□□ -0.39
TMEM53-208ENST00000476724 SIGLEC8Q9NYZ4 499 aa12.63□□□□□ -0.39
TMEM53-208ENST00000476724 HELZ2Q9BYK8 2649 aaKnown RBP12.62□□□□□ -0.39
TMEM53-208ENST00000476724 NAV2Q8IVL1 2488 aa12.62□□□□□ -0.39
TMEM53-208ENST00000476724 IGHV3-66A0A0C4DH42 116 aa12.62□□□□□ -0.39
TMEM53-208ENST00000476724 PPBPP02775 128 aa12.62□□□□□ -0.39
TMEM53-208ENST00000476724 CKS2P33552 79 aa12.62□□□□□ -0.39
TMEM53-208ENST00000476724 TMEM78Q5T7P6 136 aa12.62□□□□□ -0.39
TMEM53-208ENST00000476724 C8orf86Q6ZUL3 223 aa12.62□□□□□ -0.39
TMEM53-208ENST00000476724 LRRC75A-AS1Q8N1F1 130 aa12.62□□□□□ -0.39
TMEM53-208ENST00000476724 LINC01356Q8N9X3 169 aa12.62□□□□□ -0.39
TMEM53-208ENST00000476724 TRAV8-2A0A0B4J237 113 aa12.61□□□□□ -0.39
TMEM53-208ENST00000476724 GAGE1Q13065 139 aa12.61□□□□□ -0.39
TMEM53-208ENST00000476724 C9orf47Q6ZRZ4 202 aa12.61□□□□□ -0.39
TMEM53-208ENST00000476724 KRTAP1-3Q8IUG1 177 aa12.61□□□□□ -0.39
TMEM53-208ENST00000476724 AGPAT4-IT1Q9H0P7 198 aa12.61□□□□□ -0.39
TMEM53-208ENST00000476724 LOXL1Q08397 574 aaPredicted RBP12.61□□□□□ -0.39
TMEM53-208ENST00000476724 USMG5Q96IX5 58 aa12.61□□□□□ -0.39
TMEM53-208ENST00000476724 ARL3P36405 182 aa12.6□□□□□ -0.39
TMEM53-208ENST00000476724 IL17RELQ6ZVW7 336 aa12.6□□□□□ -0.39
TMEM53-208ENST00000476724 IGHV3OR16-13A0A075B7E8 117 aa12.6□□□□□ -0.39
TMEM53-208ENST00000476724 IGHV3-74A0A0B4J1X5 117 aa12.6□□□□□ -0.39
TMEM53-208ENST00000476724 LOC389332A0A1B0GUA5 103 aa12.6□□□□□ -0.39
TMEM53-208ENST00000476724 NDUFA4O00483 81 aa12.6□□□□□ -0.39
TMEM53-208ENST00000476724 DLEU1O43261 78 aa12.6□□□□□ -0.39
TMEM53-208ENST00000476724 TGFAP01135 160 aa12.6□□□□□ -0.39
TMEM53-208ENST00000476724 IGHG2P01859 326 aa12.6□□□□□ -0.39
TMEM53-208ENST00000476724 C9orf139Q6ZV77 190 aa12.6□□□□□ -0.39
TMEM53-208ENST00000476724 TMEM208Q9BTX3 173 aa12.6□□□□□ -0.39
TMEM53-208ENST00000476724 MUC21A0A0G2JKD1 596 aa12.59□□□□□ -0.39
TMEM53-208ENST00000476724 MUC21A0A140T8X8 626 aa12.59□□□□□ -0.39
TMEM53-208ENST00000476724 ZNF207O43670 478 aaKnown RBP12.59□□□□□ -0.39
TMEM53-208ENST00000476724 G0S2P27469 103 aa12.59□□□□□ -0.39
TMEM53-208ENST00000476724 MUC21Q5SSG8 566 aa12.59□□□□□ -0.39
TMEM53-208ENST00000476724 GLMPQ8WWB7 406 aa12.59□□□□□ -0.39
TMEM53-208ENST00000476724 Q96MF0 132 aa12.59□□□□□ -0.39
TMEM53-208ENST00000476724 NPFFR1Q9GZQ6 430 aa12.59□□□□□ -0.39
TMEM53-208ENST00000476724 LENEPQ9Y5L5 61 aa12.59□□□□□ -0.39
TMEM53-208ENST00000476724 ZANQ9Y493 2812 aa12.58□□□□□ -0.39
TMEM53-208ENST00000476724 hDV102S1A0JD36 115 aa12.58□□□□□ -0.39
TMEM53-208ENST00000476724 A6NDX4 124 aa12.58□□□□□ -0.39
TMEM53-208ENST00000476724 IGHV4-31P0DP07 118 aa12.58□□□□□ -0.39
TMEM53-208ENST00000476724 GATA3P23771 443 aa12.58□□□□□ -0.39
TMEM53-208ENST00000476724 STPG4Q8N801 248 aa12.58□□□□□ -0.39
TMEM53-208ENST00000476724 TIMM8BQ9Y5J9 83 aaPredicted RBP12.58□□□□□ -0.39
TMEM53-208ENST00000476724 CSPG4Q6UVK1 2322 aa12.58□□□□□ -0.4
TMEM53-208ENST00000476724 IGHV3-49A0A0A0MS15 119 aa12.58□□□□□ -0.4
TMEM53-208ENST00000476724 TCF21O43680 179 aa12.58□□□□□ -0.4
TMEM53-208ENST00000476724 PPIFP30405 207 aaKnown RBP12.58□□□□□ -0.4
TMEM53-208ENST00000476724 SLC25A34Q6PIV7 304 aa12.58□□□□□ -0.4
TMEM53-208ENST00000476724 C16orf92Q96LL3 132 aa12.58□□□□□ -0.4
TMEM53-208ENST00000476724 LINC00527Q9UJ94 153 aa12.58□□□□□ -0.4
TMEM53-208ENST00000476724 A0A096LNJ9 63 aa12.57□□□□□ -0.4
TMEM53-208ENST00000476724 NPYP01303 97 aa12.57□□□□□ -0.4
TMEM53-208ENST00000476724 HBDP02042 147 aa12.57□□□□□ -0.4
TMEM53-208ENST00000476724 FAM106AQ4KMX7 169 aa12.57□□□□□ -0.4
TMEM53-208ENST00000476724 RNF185Q96GF1 192 aa12.57□□□□□ -0.4
TMEM53-208ENST00000476724 IGKV3D-20A0A0C4DH25 116 aa12.57□□□□□ -0.4
TMEM53-208ENST00000476724 LY6EQ16553 131 aa12.57□□□□□ -0.4
TMEM53-208ENST00000476724 MAP1LC3AQ9H492 121 aa12.57□□□□□ -0.4
TMEM53-208ENST00000476724 SCRT2Q9NQ03 307 aa12.57□□□□□ -0.4
TMEM53-208ENST00000476724 PRRC2AP48634 2157 aaKnown RBP12.56□□□□□ -0.4
TMEM53-208ENST00000476724 H0Y8G0 127 aa12.56□□□□□ -0.4
TMEM53-208ENST00000476724 H3BUX3 64 aa12.56□□□□□ -0.4
TMEM53-208ENST00000476724 HINT1P49773 126 aaPredicted RBP12.56□□□□□ -0.4
TMEM53-208ENST00000476724 DPF1Q92782 380 aa12.56□□□□□ -0.4
TMEM53-208ENST00000476724 MSRB1Q9NZV6 116 aa12.56□□□□□ -0.4
TMEM53-208ENST00000476724 LINC01546A6NGU7 62 aa12.55□□□□□ -0.4
TMEM53-208ENST00000476724 TFPI2P48307 235 aa12.55□□□□□ -0.4
TMEM53-208ENST00000476724 LGALS9BQ3B8N2 356 aa12.55□□□□□ -0.4
TMEM53-208ENST00000476724 LGALS9CQ6DKI2 356 aa12.55□□□□□ -0.4
TMEM53-208ENST00000476724 LINC00477Q96M19 166 aa12.55□□□□□ -0.4
TMEM53-208ENST00000476724 SMIM15Q7Z3B0 74 aa12.55□□□□□ -0.4
TMEM53-208ENST00000476724 PMCHL2Q9BQD1 86 aa12.55□□□□□ -0.4
TMEM53-208ENST00000476724 NXT2Q9NPJ8 142 aaKnown RBP12.55□□□□□ -0.4
TMEM53-208ENST00000476724 GOLT1BQ9Y3E0 138 aa12.55□□□□□ -0.4
TMEM53-208ENST00000476724 A0A0G2JLM5 398 aa12.54□□□□□ -0.4
TMEM53-208ENST00000476724 PRSS57Q6UWY2 283 aa12.54□□□□□ -0.4
TMEM53-208ENST00000476724 IGHV4-4A0A075B6R2 117 aa12.53□□□□□ -0.4
TMEM53-208ENST00000476724 SMKR1H3BMG3 65 aa12.53□□□□□ -0.4
TMEM53-208ENST00000476724 OVOL1O14753 267 aa12.53□□□□□ -0.4
TMEM53-208ENST00000476724 OR8A1Q8NGG7 326 aa12.53□□□□□ -0.4
TMEM53-208ENST00000476724 MCRIP2Q9BUT9 160 aaKnown RBP12.53□□□□□ -0.4
TMEM53-208ENST00000476724 C11orf21Q9P2W6 132 aa12.53□□□□□ -0.4
TMEM53-208ENST00000476724 CACNG7P62955 275 aa12.53□□□□□ -0.4
TMEM53-208ENST00000476724 UNQ9165/PRO28630Q6UXU0 137 aa12.53□□□□□ -0.4
TMEM53-208ENST00000476724 ZNF738Q8NE65 137 aa12.53□□□□□ -0.4
TMEM53-208ENST00000476724 WFDC11Q8NEX6 87 aa12.53□□□□□ -0.4
TMEM53-208ENST00000476724 J3QLI3 93 aa12.52□□□□□ -0.4
TMEM53-208ENST00000476724 TNFRSF6BO95407 300 aa12.52□□□□□ -0.4
TMEM53-208ENST00000476724 NCR2O95944 276 aa12.52□□□□□ -0.4
TMEM53-208ENST00000476724 ZNF580Q9UK33 172 aa12.52□□□□□ -0.4
TMEM53-208ENST00000476724 IGHV7-4-1A0A0J9YVY3 117 aa12.52□□□□□ -0.41
TMEM53-208ENST00000476724 SMAD7O15105 426 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms