RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 NDFIP1Q9BT67 221 aa16.06■□□□□ 0.16
MCF2L2-209ENST00000475664 TREM1Q9NP99 234 aa16.06■□□□□ 0.16
MCF2L2-209ENST00000475664 U3KQK5 164 aa16.06■□□□□ 0.16
MCF2L2-209ENST00000475664 IGHV3OR16-12A0A075B7B8 117 aa16.05■□□□□ 0.16
MCF2L2-209ENST00000475664 TRAV12-3A0A0B4J271 114 aa16.05■□□□□ 0.16
MCF2L2-209ENST00000475664 RNASE4P34096 147 aaKnown RBP16.05■□□□□ 0.16
MCF2L2-209ENST00000475664 UBE2G1P62253 170 aa16.05■□□□□ 0.16
MCF2L2-209ENST00000475664 TOR2AQ5JU69 321 aa16.05■□□□□ 0.16
MCF2L2-209ENST00000475664 TMEM256Q8N2U0 113 aa16.05■□□□□ 0.16
MCF2L2-209ENST00000475664 S100A9P06702 114 aaKnown RBP16.04■□□□□ 0.16
MCF2L2-209ENST00000475664 RAB14P61106 215 aa16.04■□□□□ 0.16
MCF2L2-209ENST00000475664 SAPCD1Q5SSQ6 148 aa16.04■□□□□ 0.16
MCF2L2-209ENST00000475664 C8orf49Q96NF6 230 aa16.04■□□□□ 0.16
MCF2L2-209ENST00000475664 NEU1Q99519 415 aa16.04■□□□□ 0.16
MCF2L2-209ENST00000475664 TMEM208Q9BTX3 173 aa16.04■□□□□ 0.16
MCF2L2-209ENST00000475664 TGP01266 2768 aa16.03■□□□□ 0.16
MCF2L2-209ENST00000475664 ZNF324O75467 553 aaPredicted RBP16.03■□□□□ 0.16
MCF2L2-209ENST00000475664 NIPSNAP3BQ9BS92 247 aa16.03■□□□□ 0.16
MCF2L2-209ENST00000475664 H7BYZ3 331 aa16.02■□□□□ 0.16
MCF2L2-209ENST00000475664 LTAP01374 205 aa16.02■□□□□ 0.16
MCF2L2-209ENST00000475664 CLLU1Q5K131 121 aa16.02■□□□□ 0.16
MCF2L2-209ENST00000475664 Q6AWC8 147 aa16.02■□□□□ 0.16
MCF2L2-209ENST00000475664 Q8NAQ8 132 aa16.02■□□□□ 0.16
MCF2L2-209ENST00000475664 LINC01587Q99440 93 aa16.02■□□□□ 0.16
MCF2L2-209ENST00000475664 DERL1Q9BUN8 251 aa16.02■□□□□ 0.16
MCF2L2-209ENST00000475664 ZFP30Q9Y2G7 519 aa16.02■□□□□ 0.16
MCF2L2-209ENST00000475664 SMIM9A6NGZ8 99 aa16.01■□□□□ 0.15
MCF2L2-209ENST00000475664 MIFP14174 115 aa16.01■□□□□ 0.15
MCF2L2-209ENST00000475664 RPL35P42766 123 aaKnown RBP16.01■□□□□ 0.15
MCF2L2-209ENST00000475664 Q6ZQT7 251 aa16.01■□□□□ 0.15
MCF2L2-209ENST00000475664 EIF5A2Q9GZV4 153 aaKnown RBP16.01■□□□□ 0.15
MCF2L2-209ENST00000475664 MED9Q9NWA0 146 aa16.01■□□□□ 0.15
MCF2L2-209ENST00000475664 NDUFS6O75380 124 aaKnown RBP16■□□□□ 0.15
MCF2L2-209ENST00000475664 TAS2R60P59551 318 aa16■□□□□ 0.15
MCF2L2-209ENST00000475664 SMUG1Q53HV7 270 aa16■□□□□ 0.15
MCF2L2-209ENST00000475664 COX8CQ7Z4L0 72 aa16■□□□□ 0.15
MCF2L2-209ENST00000475664 IGHV4-28A0A0C4DH34 117 aa15.99■□□□□ 0.15
MCF2L2-209ENST00000475664 ZNF705GA8MUZ8 300 aaPredicted RBP15.99■□□□□ 0.15
MCF2L2-209ENST00000475664 TMEM250H0YL14 139 aa15.99■□□□□ 0.15
MCF2L2-209ENST00000475664 GCGP01275 180 aa15.99■□□□□ 0.15
MCF2L2-209ENST00000475664 ZNF80P51504 273 aaPredicted RBP15.99■□□□□ 0.15
MCF2L2-209ENST00000475664 PYGO2Q9BRQ0 406 aa15.99■□□□□ 0.15
MCF2L2-209ENST00000475664 STAB2Q8WWQ8 2551 aa15.98■□□□□ 0.15
MCF2L2-209ENST00000475664 PRM2P04554 102 aa15.98■□□□□ 0.15
MCF2L2-209ENST00000475664 RRN3P1Q2M238 152 aa15.98■□□□□ 0.15
MCF2L2-209ENST00000475664 TMEM183AQ8IXX5 376 aa15.98■□□□□ 0.15
MCF2L2-209ENST00000475664 LINC00467Q9BRT7 94 aa15.98■□□□□ 0.15
MCF2L2-209ENST00000475664 C11orf68Q9H3H3 251 aaKnown RBP15.98■□□□□ 0.15
MCF2L2-209ENST00000475664 TRAV21A0A0B4J279 112 aa15.97■□□□□ 0.15
MCF2L2-209ENST00000475664 RGS13O14921 159 aa15.97■□□□□ 0.15
MCF2L2-209ENST00000475664 ZC2HC1AQ96GY0 325 aa15.97■□□□□ 0.15
MCF2L2-209ENST00000475664 A0A0J9YWU9 116 aa15.96■□□□□ 0.15
MCF2L2-209ENST00000475664 SRP19P09132 144 aaKnown RBP15.96■□□□□ 0.15
MCF2L2-209ENST00000475664 CENPWQ5EE01 88 aa15.96■□□□□ 0.15
MCF2L2-209ENST00000475664 BAGE2Q86Y30 109 aa15.96■□□□□ 0.15
MCF2L2-209ENST00000475664 MLST8Q9BVC4 326 aa15.96■□□□□ 0.15
MCF2L2-209ENST00000475664 EDA2RQ9HAV5 297 aa15.96■□□□□ 0.15
MCF2L2-209ENST00000475664 IGHV1OR15-1A0A075B7D0 117 aa15.95■□□□□ 0.14
MCF2L2-209ENST00000475664 RAB19A4D1S5 217 aa15.95■□□□□ 0.14
MCF2L2-209ENST00000475664 DEFB4AO15263 64 aa15.95■□□□□ 0.14
MCF2L2-209ENST00000475664 PFN1P07737 140 aaKnown RBP15.95■□□□□ 0.14
MCF2L2-209ENST00000475664 HTN1P15515 57 aa15.95■□□□□ 0.14
MCF2L2-209ENST00000475664 AZU1P20160 251 aa15.95■□□□□ 0.14
MCF2L2-209ENST00000475664 SRSF3P84103 164 aaKnown RBP15.95■□□□□ 0.14
MCF2L2-209ENST00000475664 NHLRC2Q8NBF2 726 aa15.95■□□□□ 0.14
MCF2L2-209ENST00000475664 TRBV20OR9-2A0A075B6H5 130 aa15.94■□□□□ 0.14
MCF2L2-209ENST00000475664 EIF4E3Q8N5X7 224 aaKnown RBP15.94■□□□□ 0.14
MCF2L2-209ENST00000475664 PARLQ9H300 379 aa15.94■□□□□ 0.14
MCF2L2-209ENST00000475664 C9JQL5 133 aa15.93■□□□□ 0.14
MCF2L2-209ENST00000475664 IGLV2-8P01709 118 aa15.93■□□□□ 0.14
MCF2L2-209ENST00000475664 CRIP1P50238 77 aa15.93■□□□□ 0.14
MCF2L2-209ENST00000475664 PEA15Q15121 130 aa15.93■□□□□ 0.14
MCF2L2-209ENST00000475664 MUC21Q5SSG8 566 aa15.93■□□□□ 0.14
MCF2L2-209ENST00000475664 RNASE8Q8TDE3 154 aaKnown RBP15.93■□□□□ 0.14
MCF2L2-209ENST00000475664 TMEM263Q8WUH6 116 aaKnown RBP15.93■□□□□ 0.14
MCF2L2-209ENST00000475664 SMDT1Q9H4I9 107 aa15.93■□□□□ 0.14
MCF2L2-209ENST00000475664 PLAC8L1A1L4L8 177 aa15.92■□□□□ 0.14
MCF2L2-209ENST00000475664 TMEM189A5PLL7 270 aa15.92■□□□□ 0.14
MCF2L2-209ENST00000475664 GNG4P50150 75 aa15.92■□□□□ 0.14
MCF2L2-209ENST00000475664 TDRG1Q3Y452 100 aa15.92■□□□□ 0.14
MCF2L2-209ENST00000475664 ANXA2RQ3ZCQ2 193 aa15.92■□□□□ 0.14
MCF2L2-209ENST00000475664 ZNF493Q6ZR52 646 aa15.92■□□□□ 0.14
MCF2L2-209ENST00000475664 C16orf74Q96GX8 76 aa15.92■□□□□ 0.14
MCF2L2-209ENST00000475664 C11orf21Q9P2W6 132 aa15.92■□□□□ 0.14
MCF2L2-209ENST00000475664 FABP5P3A8MUU1 101 aa15.91■□□□□ 0.14
MCF2L2-209ENST00000475664 C9JCJ5 164 aa15.91■□□□□ 0.14
MCF2L2-209ENST00000475664 CEBPGP53567 150 aa15.91■□□□□ 0.14
MCF2L2-209ENST00000475664 ZNF674Q2M3X9 581 aa15.91■□□□□ 0.14
MCF2L2-209ENST00000475664 FAM159AQ6UWV7 190 aa15.91■□□□□ 0.14
MCF2L2-209ENST00000475664 SMIM12Q96EX1 92 aa15.91■□□□□ 0.14
MCF2L2-209ENST00000475664 NAGKQ9UJ70 344 aa15.91■□□□□ 0.14
MCF2L2-209ENST00000475664 CBY3A6NI87 242 aa15.9■□□□□ 0.14
MCF2L2-209ENST00000475664 SH2D1AO60880 128 aa15.9■□□□□ 0.14
MCF2L2-209ENST00000475664 FAM162BQ5T6X4 162 aa15.9■□□□□ 0.14
MCF2L2-209ENST00000475664 TP53TG3Q9ULZ0 132 aa15.9■□□□□ 0.14
MCF2L2-209ENST00000475664 PGPEP1LA6NFU8 196 aa15.89■□□□□ 0.13
MCF2L2-209ENST00000475664 EMP1P54849 157 aa15.89■□□□□ 0.13
MCF2L2-209ENST00000475664 C11orf72Q8NBR9 251 aa15.89■□□□□ 0.13
MCF2L2-209ENST00000475664 KCNS1Q96KK3 526 aa15.88■□□□□ 0.13
MCF2L2-209ENST00000475664 IBA57Q5T440 356 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms