RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 SCRT2Q9NQ03 307 aa14.11□□□□□ -0.15
LPCAT1-202ENST00000475622 SHANK1Q9Y566 2161 aa14.11□□□□□ -0.15
LPCAT1-202ENST00000475622 C15orf65H3BRN8 121 aa14.11□□□□□ -0.15
LPCAT1-202ENST00000475622 KLF5Q13887 457 aaPredicted RBP14.11□□□□□ -0.15
LPCAT1-202ENST00000475622 THAP8Q8NA92 274 aa14.11□□□□□ -0.15
LPCAT1-202ENST00000475622 PROK2Q9HC23 129 aa14.11□□□□□ -0.15
LPCAT1-202ENST00000475622 PTPRDP23468 1912 aa14.1□□□□□ -0.15
LPCAT1-202ENST00000475622 IGHV2-5P01817 119 aa14.1□□□□□ -0.15
LPCAT1-202ENST00000475622 CRLF1O75462 422 aa14.1□□□□□ -0.15
LPCAT1-202ENST00000475622 FXYD5Q96DB9 178 aa14.1□□□□□ -0.15
LPCAT1-202ENST00000475622 SPANXA1Q9NS26 97 aa14.1□□□□□ -0.15
LPCAT1-202ENST00000475622 WIPF3A6NGB9 483 aa14.1□□□□□ -0.15
LPCAT1-202ENST00000475622 IGLC1P0CG04 106 aa14.1□□□□□ -0.15
LPCAT1-202ENST00000475622 DIAPH2-AS1Q14236 149 aa14.1□□□□□ -0.15
LPCAT1-202ENST00000475622 C10orf91Q5T1B1 145 aa14.09□□□□□ -0.15
LPCAT1-202ENST00000475622 UTF1Q5T230 341 aa14.09□□□□□ -0.15
LPCAT1-202ENST00000475622 CEND1Q8N111 149 aa14.09□□□□□ -0.15
LPCAT1-202ENST00000475622 A0A1W2PPM0 123 aa14.09□□□□□ -0.15
LPCAT1-202ENST00000475622 K7ERJ3 54 aa14.09□□□□□ -0.15
LPCAT1-202ENST00000475622 E9PQ18 207 aa14.09□□□□□ -0.15
LPCAT1-202ENST00000475622 J3QQQ9 107 aa14.09□□□□□ -0.15
LPCAT1-202ENST00000475622 C11orf52Q96A22 123 aa14.09□□□□□ -0.15
LPCAT1-202ENST00000475622 CARD19Q96LW7 228 aa14.08□□□□□ -0.16
LPCAT1-202ENST00000475622 VOPP1Q96AW1 172 aa14.08□□□□□ -0.16
LPCAT1-202ENST00000475622 WDR90Q96KV7 1748 aa14.08□□□□□ -0.16
LPCAT1-202ENST00000475622 H3BMG7 143 aa14.08□□□□□ -0.16
LPCAT1-202ENST00000475622 PCNX1Q96RV3 2341 aa14.08□□□□□ -0.16
LPCAT1-202ENST00000475622 K7EM74 188 aa14.07□□□□□ -0.16
LPCAT1-202ENST00000475622 RNASE13Q5GAN3 156 aaKnown RBP14.07□□□□□ -0.16
LPCAT1-202ENST00000475622 ZNF524Q96C55 264 aa14.07□□□□□ -0.16
LPCAT1-202ENST00000475622 DKK2Q9UBU2 259 aa14.07□□□□□ -0.16
LPCAT1-202ENST00000475622 K7ENP7 123 aa14.07□□□□□ -0.16
LPCAT1-202ENST00000475622 RSPO1Q2MKA7 263 aaPredicted RBP14.07□□□□□ -0.16
LPCAT1-202ENST00000475622 TRAV12-1A0A0B4J245 112 aa14.06□□□□□ -0.16
LPCAT1-202ENST00000475622 PRSS29PA6NIE9 313 aa14.06□□□□□ -0.16
LPCAT1-202ENST00000475622 NDUFS7O75251 213 aa14.06□□□□□ -0.16
LPCAT1-202ENST00000475622 HOXD3P31249 432 aaPredicted RBP14.06□□□□□ -0.16
LPCAT1-202ENST00000475622 PYGO2Q9BRQ0 406 aa14.06□□□□□ -0.16
LPCAT1-202ENST00000475622 MED13LQ71F56 2210 aa14.06□□□□□ -0.16
LPCAT1-202ENST00000475622 A0A096LPF7 62 aa14.06□□□□□ -0.16
LPCAT1-202ENST00000475622 TAL2Q16559 108 aa14.06□□□□□ -0.16
LPCAT1-202ENST00000475622 CR1LQ2VPA4 569 aa14.06□□□□□ -0.16
LPCAT1-202ENST00000475622 AMTNQ6UX39 209 aa14.06□□□□□ -0.16
LPCAT1-202ENST00000475622 Q96MF0 132 aa14.05□□□□□ -0.16
LPCAT1-202ENST00000475622 C20orf78Q9BR46 151 aa14.05□□□□□ -0.16
LPCAT1-202ENST00000475622 HERVK_113P63121 156 aa14.05□□□□□ -0.16
LPCAT1-202ENST00000475622 TRAV13-2A0A0B4J235 113 aa14.05□□□□□ -0.16
LPCAT1-202ENST00000475622 IGHV7-4-1A0A0J9YVY3 117 aa14.05□□□□□ -0.16
LPCAT1-202ENST00000475622 IFITM1P13164 125 aa14.05□□□□□ -0.16
LPCAT1-202ENST00000475622 DSCR8Q96T75 97 aa14.05□□□□□ -0.16
LPCAT1-202ENST00000475622 TINCRA0A1B0GVN0 87 aa14.04□□□□□ -0.16
LPCAT1-202ENST00000475622 PRR20EP86478 221 aa14.04□□□□□ -0.16
LPCAT1-202ENST00000475622 PRR20CP86479 221 aa14.04□□□□□ -0.16
LPCAT1-202ENST00000475622 PRR20DP86480 221 aa14.04□□□□□ -0.16
LPCAT1-202ENST00000475622 PRR20BP86481 221 aa14.04□□□□□ -0.16
LPCAT1-202ENST00000475622 PRR20AP86496 221 aa14.04□□□□□ -0.16
LPCAT1-202ENST00000475622 ZNF491Q8N8L2 437 aa14.04□□□□□ -0.16
LPCAT1-202ENST00000475622 C17orf77Q96MU5 243 aa14.04□□□□□ -0.16
LPCAT1-202ENST00000475622 ANGP03950 147 aaKnown RBP14.04□□□□□ -0.16
LPCAT1-202ENST00000475622 ANK1P16157 1881 aa14.03□□□□□ -0.16
LPCAT1-202ENST00000475622 IGLV1-44P01699 117 aa14.03□□□□□ -0.16
LPCAT1-202ENST00000475622 HLA-DMBP28068 263 aa14.03□□□□□ -0.16
LPCAT1-202ENST00000475622 GAGE12HA6NDE8 117 aa14.03□□□□□ -0.16
LPCAT1-202ENST00000475622 K7EN84 100 aa14.03□□□□□ -0.16
LPCAT1-202ENST00000475622 CLPSL2Q6UWE3 100 aa14.03□□□□□ -0.16
LPCAT1-202ENST00000475622 LTAP01374 205 aa14.03□□□□□ -0.16
LPCAT1-202ENST00000475622 FAM120AOSQ5T036 256 aa14.03□□□□□ -0.16
LPCAT1-202ENST00000475622 ATP6V0BQ99437 205 aa14.03□□□□□ -0.16
LPCAT1-202ENST00000475622 IGFL3Q6UXB1 125 aa14.02□□□□□ -0.16
LPCAT1-202ENST00000475622 IGF2BP2-AS1Q96M15 143 aa14.02□□□□□ -0.16
LPCAT1-202ENST00000475622 TCF20Q9UGU0 1960 aaKnown RBP14.02□□□□□ -0.16
LPCAT1-202ENST00000475622 APOC4P55056 127 aa14.02□□□□□ -0.17
LPCAT1-202ENST00000475622 C12orf74Q32Q52 190 aa14.01□□□□□ -0.17
LPCAT1-202ENST00000475622 F6UB75 175 aa14.01□□□□□ -0.17
LPCAT1-202ENST00000475622 IGHG4P01861 327 aa14.01□□□□□ -0.17
LPCAT1-202ENST00000475622 XIRP1Q702N8 1843 aaKnown RBP14.01□□□□□ -0.17
LPCAT1-202ENST00000475622 LY6G6EA0A0G2JKS1 128 aa14.01□□□□□ -0.17
LPCAT1-202ENST00000475622 DYNAPQ8N1N2 210 aa14.01□□□□□ -0.17
LPCAT1-202ENST00000475622 MRPL53Q96EL3 112 aaKnown RBP14.01□□□□□ -0.17
LPCAT1-202ENST00000475622 U3KQA8 63 aa14.01□□□□□ -0.17
LPCAT1-202ENST00000475622 SIVA1O15304 175 aa14□□□□□ -0.17
LPCAT1-202ENST00000475622 GNRH2O43555 120 aa14□□□□□ -0.17
LPCAT1-202ENST00000475622 NTN5Q8WTR8 489 aaPredicted RBP14□□□□□ -0.17
LPCAT1-202ENST00000475622 SRSF2Q01130 221 aaKnown RBP14□□□□□ -0.17
LPCAT1-202ENST00000475622 CFHR4Q92496 578 aa14□□□□□ -0.17
LPCAT1-202ENST00000475622 ZNF747Q9BV97 191 aa14□□□□□ -0.17
LPCAT1-202ENST00000475622 POU2AF1Q16633 256 aa14□□□□□ -0.17
LPCAT1-202ENST00000475622 CRYGCP07315 174 aa13.99□□□□□ -0.17
LPCAT1-202ENST00000475622 EGR2P11161 476 aaPredicted RBP13.99□□□□□ -0.17
LPCAT1-202ENST00000475622 AGPAT4-IT1Q9H0P7 198 aa13.99□□□□□ -0.17
LPCAT1-202ENST00000475622 TRACP01848 142 aa13.99□□□□□ -0.17
LPCAT1-202ENST00000475622 CGB3P0DN86 165 aa13.99□□□□□ -0.17
LPCAT1-202ENST00000475622 FOXE3Q13461 319 aa13.99□□□□□ -0.17
LPCAT1-202ENST00000475622 ANKRD29Q8N6D5 301 aa13.99□□□□□ -0.17
LPCAT1-202ENST00000475622 RS1O15537 224 aa13.98□□□□□ -0.17
LPCAT1-202ENST00000475622 CRYBA4P53673 196 aa13.98□□□□□ -0.17
LPCAT1-202ENST00000475622 ELANEP08246 267 aa13.98□□□□□ -0.17
LPCAT1-202ENST00000475622 ZNF493Q6ZR52 646 aa13.98□□□□□ -0.17
LPCAT1-202ENST00000475622 SPANXDQ9BXN6 97 aa13.98□□□□□ -0.17
LPCAT1-202ENST00000475622 FAM215AQ9Y5M1 114 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms