RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 GATD1Q8NB37 220 aa11.66□□□□□ -0.54
RPUSD3-215ENST00000475470 UBE2E2Q96LR5 201 aa11.66□□□□□ -0.54
RPUSD3-215ENST00000475470 MXRA5Q9NR99 2828 aa11.65□□□□□ -0.54
RPUSD3-215ENST00000475470 EREGO14944 169 aa11.65□□□□□ -0.54
RPUSD3-215ENST00000475470 LINC01559Q495D7 138 aa11.65□□□□□ -0.54
RPUSD3-215ENST00000475470 RNASEKQ6P5S7 137 aaKnown RBP11.65□□□□□ -0.54
RPUSD3-215ENST00000475470 MYOZ3Q8TDC0 251 aa11.65□□□□□ -0.54
RPUSD3-215ENST00000475470 LINC00477Q96M19 166 aa11.65□□□□□ -0.54
RPUSD3-215ENST00000475470 MUC21A0A0G2JKD1 596 aa11.65□□□□□ -0.55
RPUSD3-215ENST00000475470 MUC21A0A140T8X8 626 aa11.65□□□□□ -0.55
RPUSD3-215ENST00000475470 HSBP1O75506 76 aa11.65□□□□□ -0.55
RPUSD3-215ENST00000475470 SRD5A1P18405 259 aa11.65□□□□□ -0.55
RPUSD3-215ENST00000475470 NTF3P20783 257 aa11.65□□□□□ -0.55
RPUSD3-215ENST00000475470 MUC21Q5SSG8 566 aa11.65□□□□□ -0.55
RPUSD3-215ENST00000475470 Q8N2B8 174 aa11.65□□□□□ -0.55
RPUSD3-215ENST00000475470 FAM181BA6NEQ2 426 aa11.64□□□□□ -0.55
RPUSD3-215ENST00000475470 IGLC6P0CF74 106 aa11.64□□□□□ -0.55
RPUSD3-215ENST00000475470 CTRLP40313 264 aa11.64□□□□□ -0.55
RPUSD3-215ENST00000475470 FAM19A2Q8N3H0 131 aa11.64□□□□□ -0.55
RPUSD3-215ENST00000475470 C2orf88Q9BSF0 95 aa11.64□□□□□ -0.55
RPUSD3-215ENST00000475470 LENEPQ9Y5L5 61 aa11.64□□□□□ -0.55
RPUSD3-215ENST00000475470 TMEM213A2RRL7 107 aa11.64□□□□□ -0.55
RPUSD3-215ENST00000475470 ZNF493Q6ZR52 646 aa11.64□□□□□ -0.55
RPUSD3-215ENST00000475470 NIT1Q86X76 327 aa11.64□□□□□ -0.55
RPUSD3-215ENST00000475470 ZNF575Q86XF7 245 aa11.64□□□□□ -0.55
RPUSD3-215ENST00000475470 RNF152Q8N8N0 203 aa11.64□□□□□ -0.55
RPUSD3-215ENST00000475470 ITPR3Q14573 2671 aa11.63□□□□□ -0.55
RPUSD3-215ENST00000475470 TWIST1Q15672 202 aa11.63□□□□□ -0.55
RPUSD3-215ENST00000475470 TMEM86BQ8N661 226 aa11.63□□□□□ -0.55
RPUSD3-215ENST00000475470 IGHV4OR15-8A0A075B7B6 117 aa11.62□□□□□ -0.55
RPUSD3-215ENST00000475470 A0A087WW49 117 aa11.62□□□□□ -0.55
RPUSD3-215ENST00000475470 SYNJ2BPP57105 145 aa11.62□□□□□ -0.55
RPUSD3-215ENST00000475470 TDRG1Q3Y452 100 aa11.62□□□□□ -0.55
RPUSD3-215ENST00000475470 IGKV3D-20A0A0C4DH25 116 aa11.62□□□□□ -0.55
RPUSD3-215ENST00000475470 ID1P41134 155 aa11.62□□□□□ -0.55
RPUSD3-215ENST00000475470 DEFB1P60022 68 aa11.62□□□□□ -0.55
RPUSD3-215ENST00000475470 KRTDAPP60985 99 aa11.62□□□□□ -0.55
RPUSD3-215ENST00000475470 SAMD13Q5VXD3 122 aa11.62□□□□□ -0.55
RPUSD3-215ENST00000475470 WFDC3Q8IUB2 231 aa11.62□□□□□ -0.55
RPUSD3-215ENST00000475470 KLHDC1Q8N7A1 406 aa11.62□□□□□ -0.55
RPUSD3-215ENST00000475470 FOXC2Q99958 501 aa11.62□□□□□ -0.55
RPUSD3-215ENST00000475470 OR8A1Q8NGG7 326 aa11.61□□□□□ -0.55
RPUSD3-215ENST00000475470 C11orf21Q9P2W6 132 aa11.61□□□□□ -0.55
RPUSD3-215ENST00000475470 ZNF469Q96JG9 3925 aaPredicted RBP11.61□□□□□ -0.55
RPUSD3-215ENST00000475470 M0QZ24 198 aa11.61□□□□□ -0.55
RPUSD3-215ENST00000475470 HOXD3P31249 432 aaPredicted RBP11.61□□□□□ -0.55
RPUSD3-215ENST00000475470 SNHG12Q9BXW3 62 aa11.61□□□□□ -0.55
RPUSD3-215ENST00000475470 KIR2DL5BA0A0G2JN68 375 aa11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 KIR2DL5BA0A0G2JPC4 375 aa11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 F6UB75 175 aa11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 J3KRW8 73 aa11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 M0R2Z0 102 aa11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 LGALS9O00182 355 aa11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 FAM104BQ5XKR9 115 aa11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 KIR2DL5AQ8N109 375 aa11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 URB1-AS1Q96HZ7 61 aa11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 LBHQ53QV2 105 aaPredicted RBP11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 AMN1Q8IY45 258 aa11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 DCANP1Q8TF63 244 aa11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 CHCHD1Q96BP2 118 aaKnown RBP11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 RNF114Q9Y508 228 aa11.6□□□□□ -0.55
RPUSD3-215ENST00000475470 PRR9Q5T870 116 aa11.59□□□□□ -0.55
RPUSD3-215ENST00000475470 MS4A6AQ9H2W1 248 aa11.59□□□□□ -0.55
RPUSD3-215ENST00000475470 YAE1D1Q9NRH1 226 aa11.59□□□□□ -0.55
RPUSD3-215ENST00000475470 DNAJC9-AS1A6NH13 148 aa11.59□□□□□ -0.55
RPUSD3-215ENST00000475470 LINC00614P0C842 121 aa11.59□□□□□ -0.55
RPUSD3-215ENST00000475470 TFPI2P48307 235 aa11.59□□□□□ -0.55
RPUSD3-215ENST00000475470 ZNF705AQ6ZN79 300 aaPredicted RBP11.59□□□□□ -0.55
RPUSD3-215ENST00000475470 Q6ZQT7 251 aa11.59□□□□□ -0.55
RPUSD3-215ENST00000475470 ZFAND2AQ8N6M9 145 aa11.59□□□□□ -0.55
RPUSD3-215ENST00000475470 CNFNQ9BYD5 112 aa11.59□□□□□ -0.55
RPUSD3-215ENST00000475470 CCDC168Q8NDH2 2452 aa11.59□□□□□ -0.55
RPUSD3-215ENST00000475470 CD5LO43866 347 aa11.58□□□□□ -0.56
RPUSD3-215ENST00000475470 PAM16Q9Y3D7 125 aa11.58□□□□□ -0.56
RPUSD3-215ENST00000475470 CSN3P07498 182 aa11.58□□□□□ -0.56
RPUSD3-215ENST00000475470 MSRB1Q9NZV6 116 aa11.58□□□□□ -0.56
RPUSD3-215ENST00000475470 HELZ2Q9BYK8 2649 aaKnown RBP11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 PDZD2O15018 2839 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 TLN2Q9Y4G6 2542 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 TRAV21A0A0B4J279 112 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 D6R8Y8 96 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 KRTAP1-1Q07627 177 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 DEFB136Q30KP8 78 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 KHDC1LQ5JSQ8 128 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 C18orf65Q6ZTR6 163 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 TMEM191AQ9H0A3 160 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 C2orf70A6NJV1 201 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 TEX43Q6ZNM6 134 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 Q6ZSV7 163 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 ORMDL3Q8N138 153 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 FAM19A4Q96LR4 140 aa11.57□□□□□ -0.56
RPUSD3-215ENST00000475470 C3orf79P0CE67 100 aa11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 NUTF2P61970 127 aaKnown RBP11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 PMCHL1Q16048 86 aa11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 MRPL51Q4U2R6 128 aaKnown RBP11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 TRBV7-9A0A0J9YWB2 115 aa11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 M0R143 59 aa11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 TCAPO15273 167 aa11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 ZNF688P0C7X2 276 aa11.56□□□□□ -0.56
RPUSD3-215ENST00000475470 RNASE4P34096 147 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms