RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 UBE2E2Q96LR5 201 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 NDUFAF3Q9BU61 184 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 CRXO43186 299 aaPredicted RBP7.41□□□□□ -1.22
USP39-214ENST00000474572 MRPL51Q4U2R6 128 aaKnown RBP7.41□□□□□ -1.22
USP39-214ENST00000474572 PRR31Q5SQ13 230 aa7.41□□□□□ -1.22
USP39-214ENST00000474572 AMN1Q8IY45 258 aa7.41□□□□□ -1.22
USP39-214ENST00000474572 RNF185Q96GF1 192 aa7.41□□□□□ -1.22
USP39-214ENST00000474572 TPPP3Q9BW30 176 aa7.41□□□□□ -1.22
USP39-214ENST00000474572 COL12A1Q99715 3063 aa7.41□□□□□ -1.22
USP39-214ENST00000474572 ASH1LQ9NR48 2969 aaKnown RBP7.41□□□□□ -1.22
USP39-214ENST00000474572 M0QZ24 198 aa7.4□□□□□ -1.22
USP39-214ENST00000474572 MED14OSP0DP75 135 aa7.4□□□□□ -1.22
USP39-214ENST00000474572 EDN2P20800 178 aa7.4□□□□□ -1.22
USP39-214ENST00000474572 DEFA6Q01524 100 aa7.4□□□□□ -1.22
USP39-214ENST00000474572 ORMDL3Q8N138 153 aa7.4□□□□□ -1.22
USP39-214ENST00000474572 OR8A1Q8NGG7 326 aa7.4□□□□□ -1.22
USP39-214ENST00000474572 OR10J6PQ8NGY7 276 aa7.4□□□□□ -1.22
USP39-214ENST00000474572 ANKRD17O75179 2603 aaKnown RBP7.4□□□□□ -1.23
USP39-214ENST00000474572 IGHV4OR15-8A0A075B7B6 117 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 A0A087WW49 117 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 TRAV21A0A0B4J279 112 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 LINC01546A6NGU7 62 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 D6R8Y8 96 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 J3QKU1 62 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 PPBPP02775 128 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 BTF3P20290 206 aaKnown RBP7.39□□□□□ -1.23
USP39-214ENST00000474572 CACNG7P62955 275 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 TWIST1Q15672 202 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 PMCHL1Q16048 86 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 TDRG1Q3Y452 100 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 PRELID3AQ96N28 172 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 ODF3Q96PU9 254 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 VAMP8Q9BV40 100 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 LAMTOR2Q9Y2Q5 125 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 CSMD1Q96PZ7 3565 aa7.39□□□□□ -1.23
USP39-214ENST00000474572 KLLNB2CW77 178 aa7.38□□□□□ -1.23
USP39-214ENST00000474572 K7EQG2 157 aa7.38□□□□□ -1.23
USP39-214ENST00000474572 ID1P41134 155 aa7.38□□□□□ -1.23
USP39-214ENST00000474572 KRTAP1-1Q07627 177 aa7.38□□□□□ -1.23
USP39-214ENST00000474572 DEFB125Q8N687 156 aa7.38□□□□□ -1.23
USP39-214ENST00000474572 WFDC11Q8NEX6 87 aa7.38□□□□□ -1.23
USP39-214ENST00000474572 TMEM70Q9BUB7 260 aa7.38□□□□□ -1.23
USP39-214ENST00000474572 AP5S1Q9NUS5 200 aa7.38□□□□□ -1.23
USP39-214ENST00000474572 SIGLEC8Q9NYZ4 499 aa7.38□□□□□ -1.23
USP39-214ENST00000474572 MSRB1Q9NZV6 116 aa7.38□□□□□ -1.23
USP39-214ENST00000474572 A0A096LNJ9 63 aa7.37□□□□□ -1.23
USP39-214ENST00000474572 PRSS47A8MTI9 375 aa7.37□□□□□ -1.23
USP39-214ENST00000474572 LEPROTL1O95214 131 aa7.37□□□□□ -1.23
USP39-214ENST00000474572 NPYP01303 97 aa7.37□□□□□ -1.23
USP39-214ENST00000474572 Q6ZQT7 251 aa7.37□□□□□ -1.23
USP39-214ENST00000474572 SPATA12Q7Z6I5 190 aa7.37□□□□□ -1.23
USP39-214ENST00000474572 MRPL52Q86TS9 123 aaKnown RBP7.37□□□□□ -1.23
USP39-214ENST00000474572 SCRT2Q9NQ03 307 aa7.37□□□□□ -1.23
USP39-214ENST00000474572 SPTAN1Q13813 2472 aaKnown RBP7.37□□□□□ -1.23
USP39-214ENST00000474572 SPG11Q96JI7 2443 aa7.37□□□□□ -1.23
USP39-214ENST00000474572 MUC21A0A0G2JKD1 596 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 MUC21A0A140T8X8 626 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 C20orf202A1L168 122 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 F6UB75 175 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 SYS1-DBNDD2H3BUS1 97 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 CSN3P07498 182 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 HOXD3P31249 432 aaPredicted RBP7.36□□□□□ -1.23
USP39-214ENST00000474572 CKS2P33552 79 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 IFI27P40305 119 aaPredicted RBP7.36□□□□□ -1.23
USP39-214ENST00000474572 DEFB1P60022 68 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 LBHQ53QV2 105 aaPredicted RBP7.36□□□□□ -1.23
USP39-214ENST00000474572 MUC21Q5SSG8 566 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 PET117Q6UWS5 81 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 LINC00173Q6ZV60 143 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 FA2HQ7L5A8 372 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 OR10AG1Q8NH19 301 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 PRSS3P2Q8NHM4 247 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 WFDC12Q8WWY7 111 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 FOXC2Q99958 501 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 MIEN1Q9BRT3 115 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 MS4A6AQ9H2W1 248 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 HSPB8Q9UJY1 196 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 PAM16Q9Y3D7 125 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 VPS13CQ709C8 3753 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 MYO18BQ8IUG5 2567 aa7.36□□□□□ -1.23
USP39-214ENST00000474572 ZFYVE26Q68DK2 2539 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 TRAV2A0A0B4J234 112 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 TCF21O43680 179 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 CD5LO43866 347 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 NXPH4O95158 308 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 SYNJ2BPP57105 145 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 RPL11P62913 178 aaKnown RBP7.35□□□□□ -1.23
USP39-214ENST00000474572 ANXA2RQ3ZCQ2 193 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 HIST2H2BCQ6DN03 193 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 ADAMTSL5Q6ZMM2 481 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 KLHDC1Q8N7A1 406 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 C4orf3Q8WVX3 66 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 C2orf88Q9BSF0 95 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 ZNF747Q9BV97 191 aa7.35□□□□□ -1.23
USP39-214ENST00000474572 UTP20O75691 2785 aaKnown RBP7.35□□□□□ -1.23
USP39-214ENST00000474572 IGKV3-7A0A075B6H7 116 aa7.34□□□□□ -1.23
USP39-214ENST00000474572 IGLV2-18A0A075B6J9 118 aa7.34□□□□□ -1.23
USP39-214ENST00000474572 TRAV9-2A0A087WT02 112 aa7.34□□□□□ -1.23
USP39-214ENST00000474572 A0A0J9YX75 114 aa7.34□□□□□ -1.23
USP39-214ENST00000474572 A8MTW9 85 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms