RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SYNMO15061 1565 aa0.14□□□□□ -2.39
ECHDC1-213ENST00000474240 FGD6Q6ZV73 1430 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 ZCCHC11Q5TAX3 1644 aaKnown RBP0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 E5RI56 91 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 E7EQ34 232 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 IGF2P01344 180 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 APOC1P02654 83 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 GTF2A1P52655 376 aaPredicted RBP0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 FXYD3Q14802 87 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 ZNF56Q15929 161 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 DCUN1D2Q6PH85 259 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 UNQ5815/PRO19632Q6UWF5 114 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 IDO2Q6ZQW0 420 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 LINC00305Q7Z4B0 112 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 DMAC1Q96GE9 116 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 OTORQ9NRC9 128 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 MRPL36Q9P0J6 103 aaKnown RBP0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 TCOF1Q13428 1488 aaKnown RBP0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 ATG2AQ2TAZ0 1938 aa0.13□□□□□ -2.39
ECHDC1-213ENST00000474240 RBBP6Q7Z6E9 1792 aaKnown RBP0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 SSPOA2VEC9 5147 aa0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 USP54Q70EL1 1684 aa0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 TRAV13-1A0A0B4J241 112 aa0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 TMEM189A5PLL7 270 aa0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 MAP1LC3B2A6NCE7 125 aa0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 IFNA21P01568 189 aa0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 S100A11P31949 105 aa0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 DSCR8Q96T75 97 aa0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 LRTM1Q9HBL6 345 aa0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 GID8Q9NWU2 228 aa0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 ATPIF1Q9UII2 106 aa0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 ANKRD31Q8N7Z5 1873 aa0.12□□□□□ -2.39
ECHDC1-213ENST00000474240 CDK12Q9NYV4 1490 aaPredicted RBP0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 A0A0G2JMM0 328 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 TRBV27A0A0K0K1C4 114 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 KLKP1Q107X0 134 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 CSAG1Q6PB30 78 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 STX12Q86Y82 276 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 LINC00208Q96KT6 92 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 VPS25Q9BRG1 176 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 SPRR2GQ9BYE4 73 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 ATG5Q9H1Y0 275 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 BOLA2Q9H3K6 86 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 TMEM14BQ9NUH8 114 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 KDM6BO15054 1643 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 ANK1P16157 1881 aa0.11□□□□□ -2.39
ECHDC1-213ENST00000474240 KNTC1P50748 2209 aa0.1□□□□□ -2.39
ECHDC1-213ENST00000474240 PNMA8CA0A1B0GUJ8 204 aa0.1□□□□□ -2.39
ECHDC1-213ENST00000474240 F2Z2F3 143 aa0.1□□□□□ -2.39
ECHDC1-213ENST00000474240 CKS2P33552 79 aa0.1□□□□□ -2.39
ECHDC1-213ENST00000474240 C5orf56Q8N8D9 126 aa0.1□□□□□ -2.39
ECHDC1-213ENST00000474240 PRR15LQ9BU68 103 aa0.1□□□□□ -2.39
ECHDC1-213ENST00000474240 COA4Q9NYJ1 87 aa0.1□□□□□ -2.39
ECHDC1-213ENST00000474240 MYH2Q9UKX2 1941 aa0.1□□□□□ -2.39
ECHDC1-213ENST00000474240 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.1□□□□□ -2.39
ECHDC1-213ENST00000474240 FAT4Q6V0I7 4981 aa0.09□□□□□ -2.39
ECHDC1-213ENST00000474240 LOC101927531A0A1B0GV80 90 aa0.09□□□□□ -2.4
ECHDC1-213ENST00000474240 IL7P13232 177 aa0.09□□□□□ -2.4
ECHDC1-213ENST00000474240 RHOHQ15669 191 aa0.09□□□□□ -2.4
ECHDC1-213ENST00000474240 IQCJQ1A5X6 159 aa0.09□□□□□ -2.4
ECHDC1-213ENST00000474240 Q5BKY6 102 aa0.09□□□□□ -2.4
ECHDC1-213ENST00000474240 VMO1Q7Z5L0 202 aa0.09□□□□□ -2.4
ECHDC1-213ENST00000474240 TEX29Q8N6K0 151 aa0.09□□□□□ -2.4
ECHDC1-213ENST00000474240 MORN4Q8NDC4 146 aa0.09□□□□□ -2.4
ECHDC1-213ENST00000474240 OR51A4Q8NGJ6 313 aa0.09□□□□□ -2.4
ECHDC1-213ENST00000474240 FAM213BQ8TBF2 198 aa0.09□□□□□ -2.4
ECHDC1-213ENST00000474240 PROK2Q9HC23 129 aa0.09□□□□□ -2.4
ECHDC1-213ENST00000474240 SYNE1Q8NF91 8797 aaKnown RBP0.09□□□□□ -2.4
ECHDC1-213ENST00000474240 CTTNBP2Q8WZ74 1663 aa0.08□□□□□ -2.4
ECHDC1-213ENST00000474240 PTPRZ1P23471 2315 aaPredicted RBP0.08□□□□□ -2.4
ECHDC1-213ENST00000474240 H3BMG7 143 aa0.08□□□□□ -2.4
ECHDC1-213ENST00000474240 POLR2JP52435 117 aaKnown RBP0.08□□□□□ -2.4
ECHDC1-213ENST00000474240 Q5XG85 94 aa0.08□□□□□ -2.4
ECHDC1-213ENST00000474240 LYPD5Q6UWN5 251 aa0.08□□□□□ -2.4
ECHDC1-213ENST00000474240 DEFB132Q7Z7B7 95 aa0.08□□□□□ -2.4
ECHDC1-213ENST00000474240 FKBP11Q9NYL4 201 aa0.08□□□□□ -2.4
ECHDC1-213ENST00000474240 DSTQ03001 7570 aaKnown RBP0.08□□□□□ -2.4
ECHDC1-213ENST00000474240 NUP210Q8TEM1 1887 aaPredicted RBP0.07□□□□□ -2.4
ECHDC1-213ENST00000474240 BLMP54132 1417 aaPredicted RBP0.07□□□□□ -2.4
ECHDC1-213ENST00000474240 IGHV1-24A0A0C4DH33 117 aa0.07□□□□□ -2.4
ECHDC1-213ENST00000474240 TRBV7-6A0A0J9YX20 115 aa0.07□□□□□ -2.4
ECHDC1-213ENST00000474240 CRYGSP22914 178 aa0.07□□□□□ -2.4
ECHDC1-213ENST00000474240 BLCAPP62952 87 aa0.07□□□□□ -2.4
ECHDC1-213ENST00000474240 HOPXQ9BPY8 73 aaPredicted RBP0.07□□□□□ -2.4
ECHDC1-213ENST00000474240 TAF9BQ9HBM6 251 aa0.07□□□□□ -2.4
ECHDC1-213ENST00000474240 COMMD3Q9UBI1 195 aa0.07□□□□□ -2.4
ECHDC1-213ENST00000474240 V9GYQ6 96 aa0.07□□□□□ -2.4
ECHDC1-213ENST00000474240 A2MP01023 1474 aa0.07□□□□□ -2.4
ECHDC1-213ENST00000474240 NBDYA0A0U1RRE5 68 aa0.06□□□□□ -2.4
ECHDC1-213ENST00000474240 TEX49A0A1B0GTD5 131 aa0.06□□□□□ -2.4
ECHDC1-213ENST00000474240 CDC42EP2O14613 210 aa0.06□□□□□ -2.4
ECHDC1-213ENST00000474240 PSPHP78330 225 aa0.06□□□□□ -2.4
ECHDC1-213ENST00000474240 PCBD2Q9H0N5 130 aa0.06□□□□□ -2.4
ECHDC1-213ENST00000474240 MED31Q9Y3C7 131 aa0.06□□□□□ -2.4
ECHDC1-213ENST00000474240 AFDNP55196 1824 aaKnown RBP0.06□□□□□ -2.4
ECHDC1-213ENST00000474240 TRPM7Q96QT4 1865 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 RREB1Q92766 1687 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 TRAV12-2A0A075B6T6 113 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 TRBV10-1A0A0K0K1A3 114 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 A0A1B0GV72 72 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms