RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 C22orf39Q6P5X5 142 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 C5orf38Q86SI9 138 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 PCP2Q8IVA1 136 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 C11orf53Q8IXP5 236 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 RAB42Q8N4Z0 105 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 ZNF441Q8N8Z8 693 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 WDR31Q8NA23 367 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 C2orf48Q96LS8 159 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 IGF2BP2-AS1Q96M15 143 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 AAMDCQ9H7C9 122 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 TRPM6Q9BX84 2022 aa5.68□□□□□ -1.5
GPNMB-209ENST00000474157 CACNA1DQ01668 2161 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 UTP20O75691 2785 aaKnown RBP5.67□□□□□ -1.5
GPNMB-209ENST00000474157 LRBAP50851 2863 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 LOC107984156A0A0G2JMH3 177 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 TRBV10-2A0A0K0K1G8 114 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 A0A1W2PNU3 283 aaPredicted RBP5.67□□□□□ -1.5
GPNMB-209ENST00000474157 LINC01548A6NM66 108 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 NCBP2LA6PVI3 153 aaKnown RBP5.67□□□□□ -1.5
GPNMB-209ENST00000474157 TMEM178BH3BS89 294 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 K7ERJ3 54 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 WISP2O76076 250 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 APOHP02749 345 aaPredicted RBP5.67□□□□□ -1.5
GPNMB-209ENST00000474157 CT62P0C5K7 136 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 CISD3P0C7P0 127 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 CA6P23280 308 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 NPC2P61916 151 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 POLR2LP62875 67 aaKnown RBP5.67□□□□□ -1.5
GPNMB-209ENST00000474157 RIGQ13278 110 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 RSPO1Q2MKA7 263 aaPredicted RBP5.67□□□□□ -1.5
GPNMB-209ENST00000474157 GTSCR1Q86UQ5 136 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 ARL17AQ8IVW1 177 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 EXOC3-AS1Q8N2X6 119 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 MDS2Q8NDY4 140 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 DYNLRB1Q9NP97 96 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 NXT2Q9NPJ8 142 aaKnown RBP5.67□□□□□ -1.5
GPNMB-209ENST00000474157 HHLA3Q9XRX5 114 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 F8P00451 2351 aa5.67□□□□□ -1.5
GPNMB-209ENST00000474157 LINC01546A6NGU7 62 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 C17orf100A8MU93 164 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 HIGD1CA8MV81 97 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 H3BMM0 161 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 H3BP45 60 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 IGHG2P01859 326 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 IGHV4-34P06331 123 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 SPINT3P49223 89 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 FBXW4P57775 412 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 HIST1H4AP62805 103 aaKnown RBP5.66□□□□□ -1.5
GPNMB-209ENST00000474157 CACNG7P62955 275 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 RPL18Q07020 188 aaKnown RBP5.66□□□□□ -1.5
GPNMB-209ENST00000474157 OR1C1Q15619 314 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 ATXN8Q156A1 80 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 LINC01620Q4KN68 170 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 CD164L2Q6UWJ8 174 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 SERP2Q8N6R1 65 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 NT5CQ8TCD5 201 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 UBE2WQ96B02 151 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 SMIM14Q96QK8 99 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 NF1P21359 2839 aa5.66□□□□□ -1.5
GPNMB-209ENST00000474157 TRGV5A0A0B4J1U4 118 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 C19orf71A6NCJ1 209 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 TEX22C9J3V5 150 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 BCE1O60756 84 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 LIFP15018 202 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 GNLYP22749 145 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 SRSF9Q13242 221 aaKnown RBP eCLIP5.65□□□□□ -1.5
GPNMB-209ENST00000474157 ZNF56Q15929 161 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 SDIM1Q6ZPB5 146 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 NABP1Q96AH0 204 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 CYYR1Q96J86 154 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 RTL8AQ9BWD3 113 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 PRSS22Q9GZN4 317 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 AICDAQ9GZX7 198 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 DPH3P1Q9H4G8 78 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 ZNF442Q9H7R0 627 aa5.65□□□□□ -1.5
GPNMB-209ENST00000474157 ZNF71Q9NQZ8 489 aaPredicted RBP5.65□□□□□ -1.5
GPNMB-209ENST00000474157 F11RQ9Y624 299 aaKnown RBP5.65□□□□□ -1.5
GPNMB-209ENST00000474157 OTOGQ6ZRI0 2925 aa5.65□□□□□ -1.51
GPNMB-209ENST00000474157 CENPEQ02224 2701 aa5.65□□□□□ -1.51
GPNMB-209ENST00000474157 LRP4O75096 1905 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 DNHD1Q96M86 4753 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 TRBV6-6A0A0A6YYG2 114 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 LINC01549A6NIU2 74 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 NPIPB11E5RHQ5 1161 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 C16orf97H3BN30 126 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 UPK2O00526 184 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 LYZL6O75951 148 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 TCL1BO95988 128 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 IAPPP10997 89 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 PLNP26678 52 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 ATP5EP56381 51 aaPredicted RBP5.64□□□□□ -1.51
GPNMB-209ENST00000474157 FXYD3Q14802 87 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 OR8A1Q8NGG7 326 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 FAM19A4Q96LR4 140 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 RPP21Q9H633 154 aaKnown RBP5.64□□□□□ -1.51
GPNMB-209ENST00000474157 GNG12Q9UBI6 72 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 LINC00527Q9UJ94 153 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 U3KQK5 164 aa5.64□□□□□ -1.51
GPNMB-209ENST00000474157 MTORP42345 2549 aa5.63□□□□□ -1.51
GPNMB-209ENST00000474157 A0A0U1RQV1 116 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms