RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	BBIP1	A8MTZ0	92 aa		0.87	□□□□□ -2.27
BBX-223	ENST00000473542		J3KT08	172 aa		0.87	□□□□□ -2.27
BBX-223	ENST00000473542	UQCRQ	O14949	82 aa		0.87	□□□□□ -2.27
BBX-223	ENST00000473542	HBD	P02042	147 aa		0.87	□□□□□ -2.27
BBX-223	ENST00000473542	GYPB	P06028	91 aa		0.87	□□□□□ -2.27
BBX-223	ENST00000473542	SLC25A4	P12235	298 aa		0.87	□□□□□ -2.27
BBX-223	ENST00000473542	BLCAP	P62952	87 aa		0.87	□□□□□ -2.27
BBX-223	ENST00000473542	SPINK9	Q5DT21	86 aa		0.87	□□□□□ -2.27
BBX-223	ENST00000473542	C3orf62	Q6ZUJ4	267 aa		0.87	□□□□□ -2.27
BBX-223	ENST00000473542	MED12	Q93074	2177 aa		0.87	□□□□□ -2.27
BBX-223	ENST00000473542		A0A1B0GX51	115 aa		0.86	□□□□□ -2.27
BBX-223	ENST00000473542		A0A1W2PPB8	328 aa		0.86	□□□□□ -2.27
BBX-223	ENST00000473542		A0A1W2PRS3	328 aa		0.86	□□□□□ -2.27
BBX-223	ENST00000473542	KIR3DP1	A8MWS1	328 aa		0.86	□□□□□ -2.27
BBX-223	ENST00000473542	DR1	Q01658	176 aa		0.86	□□□□□ -2.27
BBX-223	ENST00000473542	BRK1	Q8WUW1	75 aa		0.86	□□□□□ -2.27
BBX-223	ENST00000473542	FER1L6	Q2WGJ9	1857 aa		0.86	□□□□□ -2.27
BBX-223	ENST00000473542	OVOS2	A0A0G2JMS6	1433 aa		0.85	□□□□□ -2.27
BBX-223	ENST00000473542	KRTAP19-3	Q7Z4W3	81 aa		0.85	□□□□□ -2.27
BBX-223	ENST00000473542	CCL19	Q99731	98 aa		0.85	□□□□□ -2.27
BBX-223	ENST00000473542	FANCM	Q8IYD8	2048 aa		0.84	□□□□□ -2.27
BBX-223	ENST00000473542		M0QZK8	103 aa		0.84	□□□□□ -2.27
BBX-223	ENST00000473542	GTF2A1	P52655	376 aa	Predicted RBP	0.84	□□□□□ -2.27
BBX-223	ENST00000473542	C10orf99	Q6UWK7	81 aa		0.84	□□□□□ -2.27
BBX-223	ENST00000473542		Q6ZS92	163 aa		0.84	□□□□□ -2.27
BBX-223	ENST00000473542	DEFB132	Q7Z7B7	95 aa		0.84	□□□□□ -2.27
BBX-223	ENST00000473542	C10orf95	Q9H7T3	257 aa		0.84	□□□□□ -2.27
BBX-223	ENST00000473542	MRPL40	Q9NQ50	206 aa	Known RBP	0.84	□□□□□ -2.27
BBX-223	ENST00000473542	WDR97	A6NE52	1622 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	TRAV36DV7	A0A075B6V5	113 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	LOC107984156	A0A0G2JMH3	177 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	PNMA8C	A0A1B0GUJ8	204 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	TMEM189	A5PLL7	270 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	NUPR2	A6NF83	97 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	EDF1	O60869	148 aa	Known RBP	0.83	□□□□□ -2.28
BBX-223	ENST00000473542	DPM2	O94777	84 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	IGF2	P01344	180 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	PRB4	P10163	310 aa	Predicted RBP	0.83	□□□□□ -2.28
BBX-223	ENST00000473542	FXYD6P3	P58550	94 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	XAF1	Q6GPH4	301 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	ARL17A	Q8IVW1	177 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	OR8I2	Q8N0Y5	310 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	OR8J3	Q8NGG0	315 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	SMIM7	Q9BQ49	75 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	MRPL35	Q9NZE8	188 aa	Known RBP	0.83	□□□□□ -2.28
BBX-223	ENST00000473542	CTTNBP2	Q8WZ74	1663 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	DSPP	Q9NZW4	1301 aa		0.83	□□□□□ -2.28
BBX-223	ENST00000473542	SCT	P09683	121 aa		0.82	□□□□□ -2.28
BBX-223	ENST00000473542	SNRPD3	P62318	126 aa	Known RBP	0.82	□□□□□ -2.28
BBX-223	ENST00000473542	PSPH	P78330	225 aa		0.82	□□□□□ -2.28
BBX-223	ENST00000473542		Q5XG85	94 aa		0.82	□□□□□ -2.28
BBX-223	ENST00000473542	CSAG1	Q6PB30	78 aa		0.82	□□□□□ -2.28
BBX-223	ENST00000473542	SPATA8	Q6RVD6	105 aa		0.82	□□□□□ -2.28
BBX-223	ENST00000473542	ZGRF1	Q86YA3	2104 aa		0.82	□□□□□ -2.28
BBX-223	ENST00000473542	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	0.81	□□□□□ -2.28
BBX-223	ENST00000473542	DEGS1	O15121	323 aa		0.81	□□□□□ -2.28
BBX-223	ENST00000473542	SLC25A5	P05141	298 aa	Known RBP	0.81	□□□□□ -2.28
BBX-223	ENST00000473542	CKS2	P33552	79 aa		0.81	□□□□□ -2.28
BBX-223	ENST00000473542	CAV3	P56539	151 aa		0.81	□□□□□ -2.28
BBX-223	ENST00000473542	OTOS	Q8NHW6	89 aa		0.81	□□□□□ -2.28
BBX-223	ENST00000473542	TANC2	Q9HCD6	1990 aa		0.8	□□□□□ -2.28
BBX-223	ENST00000473542	BORCS7-ASMT	A0A0B4J1R7	106 aa		0.8	□□□□□ -2.28
BBX-223	ENST00000473542		A0A0D9SG42	100 aa		0.8	□□□□□ -2.28
BBX-223	ENST00000473542	OR8B8	Q15620	311 aa		0.8	□□□□□ -2.28
BBX-223	ENST00000473542	RHOH	Q15669	191 aa		0.8	□□□□□ -2.28
BBX-223	ENST00000473542		Q86TA4	180 aa		0.8	□□□□□ -2.28
BBX-223	ENST00000473542	METTL1	Q9UBP6	276 aa	Known RBP	0.8	□□□□□ -2.28
BBX-223	ENST00000473542	ANKRD30A	Q9BXX3	1397 aa		0.8	□□□□□ -2.28
BBX-223	ENST00000473542	MUC4	Q99102	2169 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	TENM3	Q9P273	2699 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	TMEM30CP	A0ZSE6	113 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	TCRA	P04437	139 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	HIST1H1B	P16401	226 aa	Known RBP	0.79	□□□□□ -2.28
BBX-223	ENST00000473542	QRFP	P83859	136 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	IDO2	Q6ZQW0	420 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	AKAP14	Q86UN6	197 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	OR4S1	Q8NGB4	309 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	PYDC1	Q8WXC3	89 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	PLAC4	Q8WY50	150 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	MAGOHB	Q96A72	148 aa	Known RBP	0.79	□□□□□ -2.28
BBX-223	ENST00000473542	DMAC1	Q96GE9	116 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	MRPL36	Q9P0J6	103 aa	Known RBP	0.79	□□□□□ -2.28
BBX-223	ENST00000473542	JPT1	Q9UK76	154 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	ANK1	P16157	1881 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	PTPRG	P23470	1445 aa		0.79	□□□□□ -2.28
BBX-223	ENST00000473542	ZFC3H1	O60293	1989 aa	Known RBP	0.78	□□□□□ -2.28
BBX-223	ENST00000473542	IGHV1-24	A0A0C4DH33	117 aa		0.78	□□□□□ -2.28
BBX-223	ENST00000473542	HIGD1C	A8MV81	97 aa		0.78	□□□□□ -2.28
BBX-223	ENST00000473542	SCGB1A1	P11684	91 aa		0.78	□□□□□ -2.28
BBX-223	ENST00000473542	EVI2A	P22794	236 aa		0.78	□□□□□ -2.28
BBX-223	ENST00000473542	HSD17B12	Q53GQ0	312 aa		0.78	□□□□□ -2.28
BBX-223	ENST00000473542	XIRP1	Q702N8	1843 aa	Known RBP	0.78	□□□□□ -2.29
BBX-223	ENST00000473542	TPST1	O60507	370 aa		0.77	□□□□□ -2.29
BBX-223	ENST00000473542	PAEP	P09466	180 aa		0.77	□□□□□ -2.29
BBX-223	ENST00000473542	SDC4	P31431	198 aa		0.77	□□□□□ -2.29
BBX-223	ENST00000473542	SPINT3	P49223	89 aa		0.77	□□□□□ -2.29
BBX-223	ENST00000473542	ZNF137P	P52743	207 aa		0.77	□□□□□ -2.29
BBX-223	ENST00000473542	PCBD1	P61457	104 aa		0.77	□□□□□ -2.29
BBX-223	ENST00000473542	CCDC153	Q494R4	210 aa		0.77	□□□□□ -2.29
BBX-223	ENST00000473542	LYPD5	Q6UWN5	251 aa		0.77	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms